RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 GALNT5Q7Z7M9 940 aa17.46■□□□□ 0.39
SMPD1-203ENST00000527275 SATL1Q86VE3 508 aa17.46■□□□□ 0.39
SMPD1-203ENST00000527275 C8orf59Q8N0T1 100 aaPredicted RBP17.46■□□□□ 0.39
SMPD1-203ENST00000527275 PLPP5Q8NEB5 264 aa17.46■□□□□ 0.39
SMPD1-203ENST00000527275 RIT1Q92963 219 aa17.46■□□□□ 0.39
SMPD1-203ENST00000527275 OTUB1Q96FW1 271 aaPredicted RBP17.46■□□□□ 0.39
SMPD1-203ENST00000527275 TREX2Q9BQ50 279 aaPredicted RBP17.46■□□□□ 0.39
SMPD1-203ENST00000527275 WDR54Q9H977 334 aa17.46■□□□□ 0.39
SMPD1-203ENST00000527275 CXorf21Q9HAI6 301 aa17.46■□□□□ 0.39
SMPD1-203ENST00000527275 MAT2BQ9NZL9 334 aa17.46■□□□□ 0.39
SMPD1-203ENST00000527275 GPN3Q9UHW5 284 aaPredicted RBP17.46■□□□□ 0.39
SMPD1-203ENST00000527275 TCRBV16S1A1N1A0A5B0 115 aa17.46■□□□□ 0.39
SMPD1-203ENST00000527275 CD247P20963 164 aa17.46■□□□□ 0.39
SMPD1-203ENST00000527275 POLR2IP36954 125 aaKnown RBP17.46■□□□□ 0.39
SMPD1-203ENST00000527275 IL1RL1Q01638 556 aa17.46■□□□□ 0.39
SMPD1-203ENST00000527275 MGAT2Q10469 447 aa17.46■□□□□ 0.39
SMPD1-203ENST00000527275 THAP5Q7Z6K1 395 aa17.46■□□□□ 0.39
SMPD1-203ENST00000527275 ATG16L2Q8NAA4 619 aa17.46■□□□□ 0.39
SMPD1-203ENST00000527275 PIK3C3Q8NEB9 887 aa17.46■□□□□ 0.39
SMPD1-203ENST00000527275 MIPOL1Q8TD10 442 aa17.46■□□□□ 0.39
SMPD1-203ENST00000527275 CTHRC1Q96CG8 243 aa17.46■□□□□ 0.39
SMPD1-203ENST00000527275 MESP1Q9BRJ9 268 aa17.46■□□□□ 0.39
SMPD1-203ENST00000527275 YTHDF1Q9BYJ9 559 aaKnown RBP17.46■□□□□ 0.39
SMPD1-203ENST00000527275 EXD2Q9NVH0 621 aa17.46■□□□□ 0.39
SMPD1-203ENST00000527275 DDX18Q9NVP1 670 aaKnown RBP17.46■□□□□ 0.39
SMPD1-203ENST00000527275 FAM32AQ9Y421 112 aaKnown RBP17.46■□□□□ 0.39
SMPD1-203ENST00000527275 LYVE1Q9Y5Y7 322 aa17.46■□□□□ 0.39
SMPD1-203ENST00000527275 SLC16A6O15403 523 aa17.45■□□□□ 0.38
SMPD1-203ENST00000527275 NME6O75414 186 aaPredicted RBP17.45■□□□□ 0.38
SMPD1-203ENST00000527275 SERPINB7O75635 380 aa17.45■□□□□ 0.38
SMPD1-203ENST00000527275 KLF7O75840 302 aaPredicted RBP17.45■□□□□ 0.38
SMPD1-203ENST00000527275 FESP07332 822 aa17.45■□□□□ 0.38
SMPD1-203ENST00000527275 HEXBP07686 556 aa17.45■□□□□ 0.38
SMPD1-203ENST00000527275 PABPC4LP0CB38 370 aaKnown RBP17.45■□□□□ 0.38
SMPD1-203ENST00000527275 TPD52P55327 224 aaPredicted RBP17.45■□□□□ 0.38
SMPD1-203ENST00000527275 KCNC4Q03721 635 aa17.45■□□□□ 0.38
SMPD1-203ENST00000527275 LANCL3Q6ZV70 420 aa17.45■□□□□ 0.38
SMPD1-203ENST00000527275 GALNT12Q8IXK2 581 aa17.45■□□□□ 0.38
SMPD1-203ENST00000527275 ZNF675Q8TD23 568 aa17.45■□□□□ 0.38
SMPD1-203ENST00000527275 COL21A1Q96P44 957 aa17.45■□□□□ 0.38
SMPD1-203ENST00000527275 GRIP2Q9C0E4 1043 aa17.45■□□□□ 0.38
SMPD1-203ENST00000527275 ING2Q9H160 280 aa17.45■□□□□ 0.38
SMPD1-203ENST00000527275 PNO1Q9NRX1 252 aaKnown RBP17.45■□□□□ 0.38
SMPD1-203ENST00000527275 KIF17Q9P2E2 1029 aa17.45■□□□□ 0.38
SMPD1-203ENST00000527275 ENPP4Q9Y6X5 453 aa17.45■□□□□ 0.38
SMPD1-203ENST00000527275 J3KTA2 159 aa17.45■□□□□ 0.38
SMPD1-203ENST00000527275 DNAJB5O75953 348 aa17.45■□□□□ 0.38
SMPD1-203ENST00000527275 IFNW1P05000 195 aa17.45■□□□□ 0.38
SMPD1-203ENST00000527275 EMP2P54851 167 aa17.45■□□□□ 0.38
SMPD1-203ENST00000527275 NR1H2P55055 460 aa17.45■□□□□ 0.38
SMPD1-203ENST00000527275 CDH15P55291 814 aa17.45■□□□□ 0.38
SMPD1-203ENST00000527275 SPIBQ01892 262 aa17.45■□□□□ 0.38
SMPD1-203ENST00000527275 BIKQ13323 160 aa17.45■□□□□ 0.38
SMPD1-203ENST00000527275 PUM1Q14671 1186 aaKnown RBP eCLIP17.45■□□□□ 0.38
SMPD1-203ENST00000527275 OR2L13Q8N349 312 aa17.45■□□□□ 0.38
SMPD1-203ENST00000527275 VWA5B2Q8N398 1253 aa17.45■□□□□ 0.38
SMPD1-203ENST00000527275 GPR32P1Q8NGA4 272 aa17.45■□□□□ 0.38
SMPD1-203ENST00000527275 RASSF5Q8WWW0 418 aa17.45■□□□□ 0.38
SMPD1-203ENST00000527275 PROX1Q92786 737 aa17.45■□□□□ 0.38
SMPD1-203ENST00000527275 PIP5K1AQ99755 562 aa17.45■□□□□ 0.38
SMPD1-203ENST00000527275 CRB3Q9BUF7 120 aa17.45■□□□□ 0.38
SMPD1-203ENST00000527275 RSPO3Q9BXY4 272 aaPredicted RBP17.45■□□□□ 0.38
SMPD1-203ENST00000527275 B3GNT4Q9C0J1 378 aa17.45■□□□□ 0.38
SMPD1-203ENST00000527275 SEC14L3Q9UDX4 400 aa17.45■□□□□ 0.38
SMPD1-203ENST00000527275 NXT1Q9UKK6 140 aaKnown RBP17.45■□□□□ 0.38
SMPD1-203ENST00000527275 TRIM64A6NGJ6 449 aa17.44■□□□□ 0.38
SMPD1-203ENST00000527275 HRKO00198 91 aa17.44■□□□□ 0.38
SMPD1-203ENST00000527275 PLOD3O60568 738 aa17.44■□□□□ 0.38
SMPD1-203ENST00000527275 ITGAMP11215 1152 aa17.44■□□□□ 0.38
SMPD1-203ENST00000527275 TNNI3P19429 210 aa17.44■□□□□ 0.38
SMPD1-203ENST00000527275 TCN2P20062 427 aa17.44■□□□□ 0.38
SMPD1-203ENST00000527275 RBMS1P29558 406 aaKnown RBP17.44■□□□□ 0.38
SMPD1-203ENST00000527275 KCNJ5P48544 419 aa17.44■□□□□ 0.38
SMPD1-203ENST00000527275 CRISP3P54108 245 aa17.44■□□□□ 0.38
SMPD1-203ENST00000527275 CDH12P55289 794 aa17.44■□□□□ 0.38
SMPD1-203ENST00000527275 TUBA4AP68366 448 aa17.44■□□□□ 0.38
SMPD1-203ENST00000527275 MAP4K2Q12851 820 aa17.44■□□□□ 0.38
SMPD1-203ENST00000527275 GNA13Q14344 377 aa17.44■□□□□ 0.38
SMPD1-203ENST00000527275 FAHD1Q6P587 224 aa17.44■□□□□ 0.38
SMPD1-203ENST00000527275 KRT73Q86Y46 540 aa17.44■□□□□ 0.38
SMPD1-203ENST00000527275 OR52J3Q8NH60 311 aa17.44■□□□□ 0.38
SMPD1-203ENST00000527275 GIPC3Q8TF64 312 aa17.44■□□□□ 0.38
SMPD1-203ENST00000527275 PTPMT1Q8WUK0 201 aaPredicted RBP17.44■□□□□ 0.38
SMPD1-203ENST00000527275 RIBC2Q9H4K1 309 aa17.44■□□□□ 0.38
SMPD1-203ENST00000527275 BCL2L10Q9HD36 194 aa17.44■□□□□ 0.38
SMPD1-203ENST00000527275 EQTNQ9NQ60 294 aa17.44■□□□□ 0.38
SMPD1-203ENST00000527275 KRT84Q9NSB2 600 aa17.44■□□□□ 0.38
SMPD1-203ENST00000527275 GPC6Q9Y625 555 aaPredicted RBP17.44■□□□□ 0.38
SMPD1-203ENST00000527275 A0A087WXM4 84 aa17.43■□□□□ 0.38
SMPD1-203ENST00000527275 A8MUA0 341 aa17.43■□□□□ 0.38
SMPD1-203ENST00000527275 C17orf105B2RV13 164 aa17.43■□□□□ 0.38
SMPD1-203ENST00000527275 UGT2B11O75310 529 aa17.43■□□□□ 0.38
SMPD1-203ENST00000527275 RHCEP18577 417 aa17.43■□□□□ 0.38
SMPD1-203ENST00000527275 PGDP52209 483 aa17.43■□□□□ 0.38
SMPD1-203ENST00000527275 ZNF267Q14586 743 aaPredicted RBP17.43■□□□□ 0.38
SMPD1-203ENST00000527275 EXOSC7Q15024 291 aaKnown RBP17.43■□□□□ 0.38
SMPD1-203ENST00000527275 NADK2Q4G0N4 442 aa17.43■□□□□ 0.38
SMPD1-203ENST00000527275 NLGN4XQ8N0W4 816 aa17.43■□□□□ 0.38
SMPD1-203ENST00000527275 ESX1Q8N693 406 aa17.43■□□□□ 0.38
SMPD1-203ENST00000527275 NLGN4YQ8NFZ3 816 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms