RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 C21orf58P58505 322 aa18.78■□□□□ 0.6
VPS28-206ENST00000526734 GAB1Q13480 694 aa18.78■□□□□ 0.6
VPS28-206ENST00000526734 HSPB2Q16082 182 aa18.78■□□□□ 0.6
VPS28-206ENST00000526734 SLC25A35Q3KQZ1 300 aa18.78■□□□□ 0.6
VPS28-206ENST00000526734 ACSF3Q4G176 576 aaPredicted RBP18.78■□□□□ 0.6
VPS28-206ENST00000526734 EIPR1Q53HC9 387 aa18.78■□□□□ 0.6
VPS28-206ENST00000526734 WIPI1Q5MNZ9 446 aaPredicted RBP18.78■□□□□ 0.6
VPS28-206ENST00000526734 IL23RQ5VWK5 629 aa18.78■□□□□ 0.6
VPS28-206ENST00000526734 ENPP6Q6UWR7 440 aa18.78■□□□□ 0.6
VPS28-206ENST00000526734 CCDC71Q8IV32 467 aaPredicted RBP18.78■□□□□ 0.6
VPS28-206ENST00000526734 LRRC34Q8IZ02 419 aa18.78■□□□□ 0.6
VPS28-206ENST00000526734 NUP43Q8NFH3 380 aa18.78■□□□□ 0.6
VPS28-206ENST00000526734 OR4N2Q8NGD1 307 aa18.78■□□□□ 0.6
VPS28-206ENST00000526734 OR14L1PQ8NHC6 308 aa18.78■□□□□ 0.6
VPS28-206ENST00000526734 C3orf30Q96M34 536 aa18.78■□□□□ 0.6
VPS28-206ENST00000526734 UGT2B28Q9BY64 529 aa18.78■□□□□ 0.6
VPS28-206ENST00000526734 SLC24A3Q9HC58 644 aa18.78■□□□□ 0.6
VPS28-206ENST00000526734 NOP53Q9NZM5 478 aaKnown RBP18.78■□□□□ 0.6
VPS28-206ENST00000526734 HAO1Q9UJM8 370 aa18.78■□□□□ 0.6
VPS28-206ENST00000526734 NINQ8N4C6 2090 aa18.78■□□□□ 0.6
VPS28-206ENST00000526734 WDR91A4D1P6 747 aa18.77■□□□□ 0.6
VPS28-206ENST00000526734 SOX30O94993 753 aa18.77■□□□□ 0.6
VPS28-206ENST00000526734 NKX2-2O95096 273 aa18.77■□□□□ 0.6
VPS28-206ENST00000526734 LCN1P31025 176 aa18.77■□□□□ 0.6
VPS28-206ENST00000526734 MAP3K8P41279 467 aa18.77■□□□□ 0.6
VPS28-206ENST00000526734 EMX2Q04743 252 aa18.77■□□□□ 0.6
VPS28-206ENST00000526734 CPTPQ5TA50 214 aa18.77■□□□□ 0.6
VPS28-206ENST00000526734 AAGABQ6PD74 315 aa18.77■□□□□ 0.6
VPS28-206ENST00000526734 YRDCQ86U90 279 aaKnown RBP18.77■□□□□ 0.6
VPS28-206ENST00000526734 IFNEQ86WN2 208 aa18.77■□□□□ 0.6
VPS28-206ENST00000526734 TREX2Q9BQ50 279 aaPredicted RBP18.77■□□□□ 0.6
VPS28-206ENST00000526734 NEUROD4Q9HD90 331 aa18.77■□□□□ 0.6
VPS28-206ENST00000526734 PPP4R1LQ9P1A2 415 aa18.77■□□□□ 0.6
VPS28-206ENST00000526734 GIMAP2Q9UG22 337 aa18.77■□□□□ 0.6
VPS28-206ENST00000526734 SLC6A5Q9Y345 797 aa18.77■□□□□ 0.6
VPS28-206ENST00000526734 PHF3Q92576 2039 aaKnown RBP18.77■□□□□ 0.6
VPS28-206ENST00000526734 CENPEQ02224 2701 aa18.76■□□□□ 0.59
VPS28-206ENST00000526734 A0A0G2JNJ9 132 aa18.76■□□□□ 0.59
VPS28-206ENST00000526734 A0A1W2PRB8 838 aa18.76■□□□□ 0.59
VPS28-206ENST00000526734 C2orf72A6NCS6 295 aa18.76■□□□□ 0.59
VPS28-206ENST00000526734 FAM90A27PA6NNH2 459 aa18.76■□□□□ 0.59
VPS28-206ENST00000526734 C19orf84I3L1E1 186 aa18.76■□□□□ 0.59
VPS28-206ENST00000526734 ITM2AO43736 263 aa18.76■□□□□ 0.59
VPS28-206ENST00000526734 FADS1O60427 444 aa18.76■□□□□ 0.59
VPS28-206ENST00000526734 CPN1P15169 458 aa18.76■□□□□ 0.59
VPS28-206ENST00000526734 SSTR2P30874 369 aa18.76■□□□□ 0.59
VPS28-206ENST00000526734 GABRA3P34903 492 aa18.76■□□□□ 0.59
VPS28-206ENST00000526734 TIMP3P35625 211 aa18.76■□□□□ 0.59
VPS28-206ENST00000526734 KIR3DL1P43629 444 aa18.76■□□□□ 0.59
VPS28-206ENST00000526734 SLC1A6P48664 564 aa18.76■□□□□ 0.59
VPS28-206ENST00000526734 PRIM2P49643 509 aa18.76■□□□□ 0.59
VPS28-206ENST00000526734 RPL14P50914 215 aaKnown RBP18.76■□□□□ 0.59
VPS28-206ENST00000526734 GAS1P54826 345 aa18.76■□□□□ 0.59
VPS28-206ENST00000526734 RCAN2Q14206 197 aa18.76■□□□□ 0.59
VPS28-206ENST00000526734 GANABQ14697 944 aaKnown RBP18.76■□□□□ 0.59
VPS28-206ENST00000526734 LSM12Q3MHD2 195 aaKnown RBP18.76■□□□□ 0.59
VPS28-206ENST00000526734 NSUN5P2Q63ZY6 315 aa18.76■□□□□ 0.59
VPS28-206ENST00000526734 MFSD12Q6NUT3 480 aa18.76■□□□□ 0.59
VPS28-206ENST00000526734 SZRD1Q7Z422 152 aa18.76■□□□□ 0.59
VPS28-206ENST00000526734 ZNF781Q8N8C0 355 aa18.76■□□□□ 0.59
VPS28-206ENST00000526734 OR4K17Q8NGC6 315 aa18.76■□□□□ 0.59
VPS28-206ENST00000526734 GPR151Q8TDV0 419 aa18.76■□□□□ 0.59
VPS28-206ENST00000526734 OR5P2Q8WZ92 322 aa18.76■□□□□ 0.59
VPS28-206ENST00000526734 COQ8BQ96D53 544 aa18.76■□□□□ 0.59
VPS28-206ENST00000526734 C1orf50Q9BV19 199 aa18.76■□□□□ 0.59
VPS28-206ENST00000526734 EQTNQ9NQ60 294 aa18.76■□□□□ 0.59
VPS28-206ENST00000526734 TAS2R10Q9NYW0 307 aa18.76■□□□□ 0.59
VPS28-206ENST00000526734 Q9UFV3 132 aa18.76■□□□□ 0.59
VPS28-206ENST00000526734 DKKL1Q9UK85 242 aa18.76■□□□□ 0.59
VPS28-206ENST00000526734 CAMK2AQ9UQM7 478 aa18.76■□□□□ 0.59
VPS28-206ENST00000526734 CACNA1CQ13936 2221 aa18.76■□□□□ 0.59
VPS28-206ENST00000526734 CD8B2A6NJW9 211 aa18.75■□□□□ 0.59
VPS28-206ENST00000526734 TOXO94900 526 aa18.75■□□□□ 0.59
VPS28-206ENST00000526734 NGFRP08138 427 aa18.75■□□□□ 0.59
VPS28-206ENST00000526734 KRT16P08779 473 aa18.75■□□□□ 0.59
VPS28-206ENST00000526734 SLC18A1P54219 525 aa18.75■□□□□ 0.59
VPS28-206ENST00000526734 PRKAG1P54619 331 aa18.75■□□□□ 0.59
VPS28-206ENST00000526734 DSCR4P56555 118 aaPredicted RBP18.75■□□□□ 0.59
VPS28-206ENST00000526734 STX3Q13277 289 aa18.75■□□□□ 0.59
VPS28-206ENST00000526734 PTGR1Q14914 329 aa18.75■□□□□ 0.59
VPS28-206ENST00000526734 HHATQ5VTY9 493 aa18.75■□□□□ 0.59
VPS28-206ENST00000526734 CES4AQ5XG92 561 aa18.75■□□□□ 0.59
VPS28-206ENST00000526734 CAMKMTQ7Z624 323 aa18.75■□□□□ 0.59
VPS28-206ENST00000526734 OR7A2PQ8NGA2 310 aa18.75■□□□□ 0.59
VPS28-206ENST00000526734 PSMA8Q8TAA3 256 aa18.75■□□□□ 0.59
VPS28-206ENST00000526734 ZPLD1Q8TCW7 415 aa18.75■□□□□ 0.59
VPS28-206ENST00000526734 MOAP1Q96BY2 351 aa18.75■□□□□ 0.59
VPS28-206ENST00000526734 C14orf79Q96F83 325 aa18.75■□□□□ 0.59
VPS28-206ENST00000526734 WDYHV1Q96HA8 205 aa18.75■□□□□ 0.59
VPS28-206ENST00000526734 BHLHE41Q9C0J9 482 aaPredicted RBP18.75■□□□□ 0.59
VPS28-206ENST00000526734 PTGES2Q9H7Z7 377 aa18.75■□□□□ 0.59
VPS28-206ENST00000526734 ZCCHC3Q9NUD5 404 aaKnown RBP18.75■□□□□ 0.59
VPS28-206ENST00000526734 GIN1Q9NXP7 522 aa18.75■□□□□ 0.59
VPS28-206ENST00000526734 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.74■□□□□ 0.59
VPS28-206ENST00000526734 SCO2O43819 266 aa18.74■□□□□ 0.59
VPS28-206ENST00000526734 IL2RAP01589 272 aa18.74■□□□□ 0.59
VPS28-206ENST00000526734 ALOX5P09917 674 aa18.74■□□□□ 0.59
VPS28-206ENST00000526734 IGFBP2P18065 325 aa18.74■□□□□ 0.59
VPS28-206ENST00000526734 BGNP21810 368 aa18.74■□□□□ 0.59
VPS28-206ENST00000526734 CHMP24386 653 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms