RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 RABL2AQ9UBK7 228 aaPredicted RBP3.76□□□□□ -1.81
CSDE1-211ENST00000525970 BAIAP2L1Q9UHR4 511 aa3.76□□□□□ -1.81
CSDE1-211ENST00000525970 PTBP2Q9UKA9 531 aaKnown RBP3.76□□□□□ -1.81
CSDE1-211ENST00000525970 EXOGQ9Y2C4 368 aaKnown RBP3.76□□□□□ -1.81
CSDE1-211ENST00000525970 A0A0J9YVX5 310 aa3.75□□□□□ -1.81
CSDE1-211ENST00000525970 METTL21EPA6NDL7 271 aa3.75□□□□□ -1.81
CSDE1-211ENST00000525970 RNF212BA8MTL3 300 aa3.75□□□□□ -1.81
CSDE1-211ENST00000525970 CFC1BP0CG36 223 aa3.75□□□□□ -1.81
CSDE1-211ENST00000525970 CFC1P0CG37 223 aa3.75□□□□□ -1.81
CSDE1-211ENST00000525970 ANXA3P12429 323 aa3.75□□□□□ -1.81
CSDE1-211ENST00000525970 AOC1P19801 751 aa3.75□□□□□ -1.81
CSDE1-211ENST00000525970 PEX3P56589 373 aa3.75□□□□□ -1.81
CSDE1-211ENST00000525970 GSCP56915 257 aaPredicted RBP3.75□□□□□ -1.81
CSDE1-211ENST00000525970 ACTR3P61158 418 aa3.75□□□□□ -1.81
CSDE1-211ENST00000525970 IL9RQ01113 521 aa3.75□□□□□ -1.81
CSDE1-211ENST00000525970 MAP2K1Q02750 393 aaPredicted RBP3.75□□□□□ -1.81
CSDE1-211ENST00000525970 CUL2Q13617 745 aa3.75□□□□□ -1.81
CSDE1-211ENST00000525970 CHI3L2Q15782 390 aa3.75□□□□□ -1.81
CSDE1-211ENST00000525970 NUFIP2Q7Z417 695 aaKnown RBP3.75□□□□□ -1.81
CSDE1-211ENST00000525970 CCDC71Q8IV32 467 aaPredicted RBP3.75□□□□□ -1.81
CSDE1-211ENST00000525970 SLC22A9Q8IVM8 553 aa3.75□□□□□ -1.81
CSDE1-211ENST00000525970 ZNF781Q8N8C0 355 aa3.75□□□□□ -1.81
CSDE1-211ENST00000525970 FAM76AQ8TAV0 307 aa3.75□□□□□ -1.81
CSDE1-211ENST00000525970 ZNF671Q8TAW3 534 aa3.75□□□□□ -1.81
CSDE1-211ENST00000525970 ZNF519Q8TB69 540 aa3.75□□□□□ -1.81
CSDE1-211ENST00000525970 SSC4DQ8WTU2 575 aa3.75□□□□□ -1.81
CSDE1-211ENST00000525970 MYLPFQ96A32 169 aa3.75□□□□□ -1.81
CSDE1-211ENST00000525970 AMDHD1Q96NU7 426 aa3.75□□□□□ -1.81
CSDE1-211ENST00000525970 CRNKL1Q9BZJ0 848 aaKnown RBP3.75□□□□□ -1.81
CSDE1-211ENST00000525970 RAB18Q9NP72 206 aa3.75□□□□□ -1.81
CSDE1-211ENST00000525970 CIDEBQ9UHD4 219 aa3.75□□□□□ -1.81
CSDE1-211ENST00000525970 CYTH4Q9UIA0 394 aa3.75□□□□□ -1.81
CSDE1-211ENST00000525970 ANAPC7Q9UJX3 599 aa3.75□□□□□ -1.81
CSDE1-211ENST00000525970 WDR45Q9Y484 360 aa3.75□□□□□ -1.81
CSDE1-211ENST00000525970 A0A1W2PNV4 684 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 BCLAF3A2AJT9 711 aaKnown RBP3.74□□□□□ -1.81
CSDE1-211ENST00000525970 MFSD2BA6NFX1 497 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 IGLON5A6NGN9 336 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 ZNF716A6NP11 495 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 ARHGEF33A8MVX0 844 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 HHLA1C9JL84 531 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 SGK1O00141 431 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 KLHL41O60662 606 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 FCMRO60667 390 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 RAMP1O60894 148 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 PDE5AO76074 875 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 ZNF735P0CB33 412 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 TOP1P11387 765 aaKnown RBP3.74□□□□□ -1.81
CSDE1-211ENST00000525970 CD1DP15813 335 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 ZNF26P17031 533 aaPredicted RBP3.74□□□□□ -1.81
CSDE1-211ENST00000525970 PCMT1P22061 227 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 PRKACGP22612 351 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 LAP3P28838 519 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 POU3F4P49335 361 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 CEBPDP49716 269 aaPredicted RBP3.74□□□□□ -1.81
CSDE1-211ENST00000525970 STK19P49842 368 aaPredicted RBP3.74□□□□□ -1.81
CSDE1-211ENST00000525970 SNRPD1P62314 119 aaKnown RBP3.74□□□□□ -1.81
CSDE1-211ENST00000525970 RPL23AP62750 156 aaKnown RBP3.74□□□□□ -1.81
CSDE1-211ENST00000525970 EWSR1Q01844 656 aaKnown RBP eCLIP3.74□□□□□ -1.81
CSDE1-211ENST00000525970 BNIP1Q12981 228 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 TMEM187Q14656 261 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 ATXN7L3Q14CW9 347 aaPredicted RBP3.74□□□□□ -1.81
CSDE1-211ENST00000525970 CCL14Q16627 93 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 ECSCRQ19T08 205 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 MTHFSDQ2M296 383 aaKnown RBP3.74□□□□□ -1.81
CSDE1-211ENST00000525970 GGTA1PQ4G0N0 100 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 KCTD21Q4G0X4 260 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 CEP85LQ5SZL2 805 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 TMEM225Q6GV28 225 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 KRTAP5-4Q6L8H1 288 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 PRR5LQ6MZQ0 368 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 FAM71F2Q6NXP2 309 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 LCLAT1Q6UWP7 414 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 STAC2Q6ZMT1 411 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 LANCL3Q6ZV70 420 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 STOX1Q6ZVD7 989 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 ZFAND4Q86XD8 727 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 ZNF491Q8N8L2 437 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 NUP37Q8NFH4 326 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 OR5D13Q8NGL4 314 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 OR1B1Q8NGR6 318 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 C18orf25Q96B23 403 aaPredicted RBP3.74□□□□□ -1.81
CSDE1-211ENST00000525970 C11orf24Q96F05 449 aaPredicted RBP3.74□□□□□ -1.81
CSDE1-211ENST00000525970 TPD52L3Q96J77 140 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 ELMO2Q96JJ3 720 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 CNOT6LQ96LI5 555 aaKnown RBP3.74□□□□□ -1.81
CSDE1-211ENST00000525970 TGM7Q96PF1 710 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 NPAS2Q99743 824 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 FAM173AQ9BQD7 235 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 CCDC77Q9BR77 488 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 TMEM121Q9BTD3 319 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 WDR13Q9H1Z4 485 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 METTL7AQ9H8H3 244 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 B3GAT2Q9NPZ5 323 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 DEPPQ9NTK1 212 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 UFSP2Q9NUQ7 469 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 UTP6Q9NYH9 597 aaKnown RBP3.74□□□□□ -1.81
CSDE1-211ENST00000525970 THAP10Q9P2Z0 257 aaPredicted RBP3.74□□□□□ -1.81
CSDE1-211ENST00000525970 GALPQ9UBC7 116 aa3.74□□□□□ -1.81
CSDE1-211ENST00000525970 GNG12Q9UBI6 72 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms