RNA–Protein interactions for RNA: ENST00000525459.1

PTPRK-218, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2 BASIC

Gene PTPRK, Length 1,722 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-218ENST00000525459 PRR22Q8IZ63 422 aa17.21■□□□□ 0.35
PTPRK-218ENST00000525459 FBXW8Q8N3Y1 598 aa17.21■□□□□ 0.35
PTPRK-218ENST00000525459 FITM2Q8N6M3 262 aa17.21■□□□□ 0.35
PTPRK-218ENST00000525459 RBMXL3Q8N7X1 1067 aaKnown RBP17.21■□□□□ 0.35
PTPRK-218ENST00000525459 FAM98AQ8NCA5 519 aaKnown RBP17.21■□□□□ 0.35
PTPRK-218ENST00000525459 FAM110BQ8TC76 370 aa17.21■□□□□ 0.35
PTPRK-218ENST00000525459 PNPT1Q8TCS8 783 aaKnown RBP17.21■□□□□ 0.35
PTPRK-218ENST00000525459 SCMH1Q96GD3 660 aa17.21■□□□□ 0.35
PTPRK-218ENST00000525459 AURKBQ96GD4 344 aaPredicted RBP17.21■□□□□ 0.35
PTPRK-218ENST00000525459 SIGLEC12Q96PQ1 595 aa17.21■□□□□ 0.35
PTPRK-218ENST00000525459 SACM1LQ9NTJ5 587 aa17.21■□□□□ 0.35
PTPRK-218ENST00000525459 P2RX2Q9UBL9 471 aa17.21■□□□□ 0.35
PTPRK-218ENST00000525459 ABCG2Q9UNQ0 655 aa17.21■□□□□ 0.35
PTPRK-218ENST00000525459 AP3M1Q9Y2T2 418 aa17.21■□□□□ 0.35
PTPRK-218ENST00000525459 TLN1Q9Y490 2541 aaKnown RBP17.21■□□□□ 0.35
PTPRK-218ENST00000525459 ANKRD33BA6NCL7 494 aa17.21■□□□□ 0.35
PTPRK-218ENST00000525459 HMGN4O00479 90 aa17.21■□□□□ 0.35
PTPRK-218ENST00000525459 NME2P1O60361 137 aa17.21■□□□□ 0.35
PTPRK-218ENST00000525459 P04436 131 aa17.21■□□□□ 0.35
PTPRK-218ENST00000525459 SP1P08047 785 aa17.21■□□□□ 0.35
PTPRK-218ENST00000525459 BMP2P12643 396 aa17.21■□□□□ 0.35
PTPRK-218ENST00000525459 GPX2P18283 190 aa17.21■□□□□ 0.35
PTPRK-218ENST00000525459 NME2P22392 152 aa17.21■□□□□ 0.35
PTPRK-218ENST00000525459 CD97P48960 835 aa17.21■□□□□ 0.35
PTPRK-218ENST00000525459 DSTNP60981 165 aa17.21■□□□□ 0.35
PTPRK-218ENST00000525459 ARHGAP11BQ3KRB8 267 aa17.21■□□□□ 0.35
PTPRK-218ENST00000525459 ZNF766Q5HY98 468 aa17.21■□□□□ 0.35
PTPRK-218ENST00000525459 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.21■□□□□ 0.35
PTPRK-218ENST00000525459 SLC6A19Q695T7 634 aa17.21■□□□□ 0.35
PTPRK-218ENST00000525459 SPINK14Q6IE38 97 aa17.21■□□□□ 0.35
PTPRK-218ENST00000525459 SLC25A25Q6KCM7 469 aa17.21■□□□□ 0.35
PTPRK-218ENST00000525459 RPUSD3Q6P087 351 aaKnown RBP17.21■□□□□ 0.35
PTPRK-218ENST00000525459 TEX19Q8NA77 164 aa17.21■□□□□ 0.35
PTPRK-218ENST00000525459 OR4N2Q8NGD1 307 aa17.21■□□□□ 0.35
PTPRK-218ENST00000525459 ADOQ96SZ5 270 aa17.21■□□□□ 0.35
PTPRK-218ENST00000525459 CPPED1Q9BRF8 314 aaPredicted RBP17.21■□□□□ 0.35
PTPRK-218ENST00000525459 SH2D2AQ9NP31 389 aa17.21■□□□□ 0.35
PTPRK-218ENST00000525459 NDE1Q9NXR1 346 aa17.21■□□□□ 0.35
PTPRK-218ENST00000525459 CALML5Q9NZT1 146 aa17.21■□□□□ 0.35
PTPRK-218ENST00000525459 CHCHD2Q9Y6H1 151 aaPredicted RBP17.21■□□□□ 0.35
PTPRK-218ENST00000525459 GXYLT2A0PJZ3 443 aa17.2■□□□□ 0.34
PTPRK-218ENST00000525459 FXYD1O00168 92 aa17.2■□□□□ 0.34
PTPRK-218ENST00000525459 UNC5CO95185 931 aa17.2■□□□□ 0.34
PTPRK-218ENST00000525459 F10P00742 488 aa17.2■□□□□ 0.34
PTPRK-218ENST00000525459 OR12D1P0DN82 309 aa17.2■□□□□ 0.34
PTPRK-218ENST00000525459 FBXW4P57775 412 aa17.2■□□□□ 0.34
PTPRK-218ENST00000525459 ART3Q13508 389 aa17.2■□□□□ 0.34
PTPRK-218ENST00000525459 TRPM8Q7Z2W7 1104 aa17.2■□□□□ 0.34
PTPRK-218ENST00000525459 ZNF227Q86WZ6 799 aa17.2■□□□□ 0.34
PTPRK-218ENST00000525459 METTL25Q8N6Q8 603 aa17.2■□□□□ 0.34
PTPRK-218ENST00000525459 OR10G3Q8NGC4 313 aa17.2■□□□□ 0.34
PTPRK-218ENST00000525459 SPPL2AQ8TCT8 520 aa17.2■□□□□ 0.34
PTPRK-218ENST00000525459 XAGE5Q8WWM1 108 aa17.2■□□□□ 0.34
PTPRK-218ENST00000525459 PMM1Q92871 262 aa17.2■□□□□ 0.34
PTPRK-218ENST00000525459 HGDQ93099 445 aa17.2■□□□□ 0.34
PTPRK-218ENST00000525459 EFHD2Q96C19 240 aaPredicted RBP17.2■□□□□ 0.34
PTPRK-218ENST00000525459 SPATA9Q9BWV2 254 aa17.2■□□□□ 0.34
PTPRK-218ENST00000525459 IL1RL2Q9HB29 575 aa17.2■□□□□ 0.34
PTPRK-218ENST00000525459 KLRC4-KLRK1H3BQV0 150 aa17.19■□□□□ 0.34
PTPRK-218ENST00000525459 AIM2O14862 343 aa17.19■□□□□ 0.34
PTPRK-218ENST00000525459 UGT2B11O75310 529 aa17.19■□□□□ 0.34
PTPRK-218ENST00000525459 STX11O75558 287 aa17.19■□□□□ 0.34
PTPRK-218ENST00000525459 NGFRP08138 427 aa17.19■□□□□ 0.34
PTPRK-218ENST00000525459 NUDT2P50583 147 aa17.19■□□□□ 0.34
PTPRK-218ENST00000525459 OTUB1Q96FW1 271 aaPredicted RBP17.19■□□□□ 0.34
PTPRK-218ENST00000525459 TRNT1Q96Q11 434 aaKnown RBP17.19■□□□□ 0.34
PTPRK-218ENST00000525459 HOPXQ9BPY8 73 aaPredicted RBP17.19■□□□□ 0.34
PTPRK-218ENST00000525459 THUMPD3Q9BV44 507 aaKnown RBP17.19■□□□□ 0.34
PTPRK-218ENST00000525459 HOXD1Q9GZZ0 328 aa17.19■□□□□ 0.34
PTPRK-218ENST00000525459 ANAPC2Q9UJX6 822 aa17.19■□□□□ 0.34
PTPRK-218ENST00000525459 CSAG2Q9Y5P2 127 aa17.19■□□□□ 0.34
PTPRK-218ENST00000525459 RFX3P48380 749 aa17.18■□□□□ 0.34
PTPRK-218ENST00000525459 CLK3P49761 638 aaKnown RBP17.18■□□□□ 0.34
PTPRK-218ENST00000525459 COX20Q5RI15 118 aa17.18■□□□□ 0.34
PTPRK-218ENST00000525459 AP1ARQ63HQ0 302 aa17.18■□□□□ 0.34
PTPRK-218ENST00000525459 NANOGP8Q6NSW7 305 aa17.18■□□□□ 0.34
PTPRK-218ENST00000525459 ZNF527Q8NB42 609 aa17.18■□□□□ 0.34
PTPRK-218ENST00000525459 CATSPER1Q8NEC5 780 aa17.18■□□□□ 0.34
PTPRK-218ENST00000525459 RAB8BQ92930 207 aa17.18■□□□□ 0.34
PTPRK-218ENST00000525459 SDF2Q99470 211 aa17.18■□□□□ 0.34
PTPRK-218ENST00000525459 ZNF350Q9GZX5 532 aa17.18■□□□□ 0.34
PTPRK-218ENST00000525459 METTL7AQ9H8H3 244 aa17.18■□□□□ 0.34
PTPRK-218ENST00000525459 NANOGQ9H9S0 305 aa17.18■□□□□ 0.34
PTPRK-218ENST00000525459 PCDHGA10Q9Y5H3 936 aa17.18■□□□□ 0.34
PTPRK-218ENST00000525459 SNX4O95219 450 aa17.18■□□□□ 0.34
PTPRK-218ENST00000525459 CYP4B1P13584 511 aa17.18■□□□□ 0.34
PTPRK-218ENST00000525459 ETFAP13804 333 aa17.18■□□□□ 0.34
PTPRK-218ENST00000525459 CALB2P22676 271 aa17.18■□□□□ 0.34
PTPRK-218ENST00000525459 CRISP3P54108 245 aa17.18■□□□□ 0.34
PTPRK-218ENST00000525459 PRAMEF8Q5VWM4 474 aa17.18■□□□□ 0.34
PTPRK-218ENST00000525459 PRAMEF7Q5VXH5 474 aa17.18■□□□□ 0.34
PTPRK-218ENST00000525459 SLC30A6Q6NXT4 461 aa17.18■□□□□ 0.34
PTPRK-218ENST00000525459 FIGNL1Q6PIW4 674 aa17.18■□□□□ 0.34
PTPRK-218ENST00000525459 MDGA2Q7Z553 956 aa17.18■□□□□ 0.34
PTPRK-218ENST00000525459 SERPINA11Q86U17 422 aa17.18■□□□□ 0.34
PTPRK-218ENST00000525459 POGLUT1Q8NBL1 392 aa17.18■□□□□ 0.34
PTPRK-218ENST00000525459 OR5M3Q8NGP4 307 aa17.18■□□□□ 0.34
PTPRK-218ENST00000525459 RNF138Q8WVD3 245 aa17.18■□□□□ 0.34
PTPRK-218ENST00000525459 DTNBP1Q96EV8 351 aa17.18■□□□□ 0.34
PTPRK-218ENST00000525459 TMEM38AQ9H6F2 299 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms