RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 RAE1P78406 368 aaKnown RBP21.59■■□□□ 1.05
USP47-205ENST00000525257 MRPS22P82650 360 aaKnown RBP21.59■■□□□ 1.05
USP47-205ENST00000525257 ZNF155Q12901 538 aaPredicted RBP21.59■■□□□ 1.05
USP47-205ENST00000525257 STX5Q13190 355 aa21.59■■□□□ 1.05
USP47-205ENST00000525257 CSPG4Q6UVK1 2322 aa21.59■■□□□ 1.05
USP47-205ENST00000525257 C20orf204Q6ZNR8 217 aa21.59■■□□□ 1.05
USP47-205ENST00000525257 FADS6Q8N9I5 356 aa21.59■■□□□ 1.05
USP47-205ENST00000525257 OR2M3Q8NG83 312 aa21.59■■□□□ 1.05
USP47-205ENST00000525257 OR7G2Q8NG99 324 aa21.59■■□□□ 1.05
USP47-205ENST00000525257 OR5M1Q8NGP8 315 aa21.59■■□□□ 1.05
USP47-205ENST00000525257 PPP1R14CQ8TAE6 165 aa21.59■■□□□ 1.05
USP47-205ENST00000525257 MARK4Q96L34 752 aa21.59■■□□□ 1.05
USP47-205ENST00000525257 MDFIQ99750 246 aa21.59■■□□□ 1.05
USP47-205ENST00000525257 GIMAP4Q9NUV9 329 aa21.59■■□□□ 1.05
USP47-205ENST00000525257 MED11Q9P086 117 aa21.59■■□□□ 1.05
USP47-205ENST00000525257 ZNF337Q9Y3M9 751 aa21.59■■□□□ 1.05
USP47-205ENST00000525257 HEATR5AQ86XA9 2040 aa21.58■■□□□ 1.05
USP47-205ENST00000525257 EMC8O43402 210 aa21.58■■□□□ 1.05
USP47-205ENST00000525257 CGAP01215 116 aa21.58■■□□□ 1.05
USP47-205ENST00000525257 SBK3P0C264 359 aa21.58■■□□□ 1.05
USP47-205ENST00000525257 COL6A2P12110 1019 aa21.58■■□□□ 1.05
USP47-205ENST00000525257 EEFSECP57772 596 aaKnown RBP21.58■■□□□ 1.05
USP47-205ENST00000525257 SH2D4BQ5SQS7 431 aa21.58■■□□□ 1.05
USP47-205ENST00000525257 ANKRD34AQ69YU3 496 aa21.58■■□□□ 1.05
USP47-205ENST00000525257 SAMD14Q8IZD0 417 aaPredicted RBP21.58■■□□□ 1.05
USP47-205ENST00000525257 FAM9CQ8IZT9 166 aa21.58■■□□□ 1.05
USP47-205ENST00000525257 ZNF610Q8N9Z0 462 aa21.58■■□□□ 1.05
USP47-205ENST00000525257 FNDC9Q8TBE3 224 aa21.58■■□□□ 1.05
USP47-205ENST00000525257 PAFAH2Q99487 392 aa21.58■■□□□ 1.05
USP47-205ENST00000525257 C1QTNF3Q9BXJ4 246 aa21.58■■□□□ 1.05
USP47-205ENST00000525257 TAS2R9Q9NYW1 312 aa21.58■■□□□ 1.05
USP47-205ENST00000525257 FLRT3Q9NZU0 649 aa21.58■■□□□ 1.05
USP47-205ENST00000525257 H3BML4 177 aa21.57■■□□□ 1.04
USP47-205ENST00000525257 PLOD3O60568 738 aa21.57■■□□□ 1.04
USP47-205ENST00000525257 KRT6AP02538 564 aa21.57■■□□□ 1.04
USP47-205ENST00000525257 KRT6BP04259 564 aa21.57■■□□□ 1.04
USP47-205ENST00000525257 HSD3B1P14060 373 aa21.57■■□□□ 1.04
USP47-205ENST00000525257 HSD3B2P26439 372 aa21.57■■□□□ 1.04
USP47-205ENST00000525257 LOXP28300 417 aaPredicted RBP21.57■■□□□ 1.04
USP47-205ENST00000525257 CASQ1P31415 396 aa21.57■■□□□ 1.04
USP47-205ENST00000525257 HSD17B3P37058 310 aa21.57■■□□□ 1.04
USP47-205ENST00000525257 KRT6CP48668 564 aa21.57■■□□□ 1.04
USP47-205ENST00000525257 CLDN20P56880 219 aa21.57■■□□□ 1.04
USP47-205ENST00000525257 CLCQ05315 142 aa21.57■■□□□ 1.04
USP47-205ENST00000525257 CSTF3Q12996 717 aaKnown RBP21.57■■□□□ 1.04
USP47-205ENST00000525257 C22orf34Q6ZV56 151 aa21.57■■□□□ 1.04
USP47-205ENST00000525257 C16orf78Q8WTQ4 265 aa21.57■■□□□ 1.04
USP47-205ENST00000525257 RNF122Q9H9V4 155 aa21.57■■□□□ 1.04
USP47-205ENST00000525257 SLC35C2Q9NQQ7 365 aa21.57■■□□□ 1.04
USP47-205ENST00000525257 ROS1P08922 2347 aa21.56■■□□□ 1.04
USP47-205ENST00000525257 OR2M5A3KFT3 312 aa21.56■■□□□ 1.04
USP47-205ENST00000525257 INAFM1C9JVW0 142 aa21.56■■□□□ 1.04
USP47-205ENST00000525257 TNFRSF21O75509 655 aa21.56■■□□□ 1.04
USP47-205ENST00000525257 CD8BP10966 210 aa21.56■■□□□ 1.04
USP47-205ENST00000525257 SERPINB9P50453 376 aa21.56■■□□□ 1.04
USP47-205ENST00000525257 PSG6Q00889 435 aa21.56■■□□□ 1.04
USP47-205ENST00000525257 PON3Q15166 354 aa21.56■■□□□ 1.04
USP47-205ENST00000525257 TEX35Q5T0J7 233 aa21.56■■□□□ 1.04
USP47-205ENST00000525257 UHMK1Q8TAS1 419 aaKnown RBP21.56■■□□□ 1.04
USP47-205ENST00000525257 EBPLQ9BY08 206 aa21.56■■□□□ 1.04
USP47-205ENST00000525257 ACPTQ9BZG2 426 aa21.56■■□□□ 1.04
USP47-205ENST00000525257 KLHL4Q9C0H6 718 aa21.56■■□□□ 1.04
USP47-205ENST00000525257 PROCRQ9UNN8 238 aa21.56■■□□□ 1.04
USP47-205ENST00000525257 ZNF175Q9Y473 711 aa21.56■■□□□ 1.04
USP47-205ENST00000525257 PCNX3Q9H6A9 2034 aa21.55■■□□□ 1.04
USP47-205ENST00000525257 TRIM49D1C9J1S8 452 aa21.55■■□□□ 1.04
USP47-205ENST00000525257 FADS1O60427 444 aa21.55■■□□□ 1.04
USP47-205ENST00000525257 PTH2RP49190 550 aa21.55■■□□□ 1.04
USP47-205ENST00000525257 HTR6P50406 440 aa21.55■■□□□ 1.04
USP47-205ENST00000525257 PPP2R2BQ00005 443 aa21.55■■□□□ 1.04
USP47-205ENST00000525257 ACSM2AQ08AH3 577 aa21.55■■□□□ 1.04
USP47-205ENST00000525257 GANABQ14697 944 aaKnown RBP21.55■■□□□ 1.04
USP47-205ENST00000525257 HEPACAMQ14CZ8 416 aa21.55■■□□□ 1.04
USP47-205ENST00000525257 RASA2Q15283 850 aa21.55■■□□□ 1.04
USP47-205ENST00000525257 EXOC3L2Q2M3D2 409 aa21.55■■□□□ 1.04
USP47-205ENST00000525257 ACSM2BQ68CK6 577 aa21.55■■□□□ 1.04
USP47-205ENST00000525257 C8orf74Q6P047 294 aa21.55■■□□□ 1.04
USP47-205ENST00000525257 TMEM151AQ8N4L1 468 aa21.55■■□□□ 1.04
USP47-205ENST00000525257 LRRN4CLQ8ND94 238 aa21.55■■□□□ 1.04
USP47-205ENST00000525257 APIPQ96GX9 242 aa21.55■■□□□ 1.04
USP47-205ENST00000525257 BBS4Q96RK4 519 aa21.55■■□□□ 1.04
USP47-205ENST00000525257 FUT8Q9BYC5 575 aa21.55■■□□□ 1.04
USP47-205ENST00000525257 GSX2Q9BZM3 304 aa21.55■■□□□ 1.04
USP47-205ENST00000525257 RTN4RQ9BZR6 473 aa21.55■■□□□ 1.04
USP47-205ENST00000525257 STMN4Q9H169 189 aaPredicted RBP21.55■■□□□ 1.04
USP47-205ENST00000525257 CDC42EP4Q9H3Q1 356 aaKnown RBP21.55■■□□□ 1.04
USP47-205ENST00000525257 SDHAF3Q9NRP4 125 aa21.55■■□□□ 1.04
USP47-205ENST00000525257 POC1B-GALNT4F8VUJ3 575 aa21.54■■□□□ 1.04
USP47-205ENST00000525257 COQ9O75208 318 aa21.54■■□□□ 1.04
USP47-205ENST00000525257 ULK1O75385 1050 aa21.54■■□□□ 1.04
USP47-205ENST00000525257 SUPT7LO94864 414 aa21.54■■□□□ 1.04
USP47-205ENST00000525257 TBXA2RP21731 343 aa21.54■■□□□ 1.04
USP47-205ENST00000525257 HMOX2P30519 316 aa21.54■■□□□ 1.04
USP47-205ENST00000525257 TIA1P31483 386 aaKnown RBP eCLIP21.54■■□□□ 1.04
USP47-205ENST00000525257 MPIP34949 423 aa21.54■■□□□ 1.04
USP47-205ENST00000525257 FGFBP1Q14512 234 aa21.54■■□□□ 1.04
USP47-205ENST00000525257 UNC50Q53HI1 259 aa21.54■■□□□ 1.04
USP47-205ENST00000525257 SPIN4Q56A73 249 aa21.54■■□□□ 1.04
USP47-205ENST00000525257 GPRIN3Q6ZVF9 776 aa21.54■■□□□ 1.04
USP47-205ENST00000525257 METTL6Q8TCB7 284 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms