RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 MAP4K2Q12851 820 aa8.35□□□□□ -1.07
PKP3-202ENST00000524646 ZNF155Q12901 538 aaPredicted RBP8.35□□□□□ -1.07
PKP3-202ENST00000524646 RIN1Q13671 783 aa8.35□□□□□ -1.07
PKP3-202ENST00000524646 CAMK1Q14012 370 aa8.35□□□□□ -1.07
PKP3-202ENST00000524646 KRT33BQ14525 404 aa8.35□□□□□ -1.07
PKP3-202ENST00000524646 LTB4RQ15722 352 aa8.35□□□□□ -1.07
PKP3-202ENST00000524646 ZNF750Q32MQ0 723 aa8.35□□□□□ -1.07
PKP3-202ENST00000524646 ZNF791Q3KP31 576 aaPredicted RBP8.35□□□□□ -1.07
PKP3-202ENST00000524646 C6orf132Q5T0Z8 1188 aa8.35□□□□□ -1.07
PKP3-202ENST00000524646 SLC35F1Q5T1Q4 408 aa8.35□□□□□ -1.07
PKP3-202ENST00000524646 C18orf63Q68DL7 685 aa8.35□□□□□ -1.07
PKP3-202ENST00000524646 TYW3Q6IPR3 259 aaKnown RBP8.35□□□□□ -1.07
PKP3-202ENST00000524646 MFSD12Q6NUT3 480 aa8.35□□□□□ -1.07
PKP3-202ENST00000524646 SLC30A6Q6NXT4 461 aa8.35□□□□□ -1.07
PKP3-202ENST00000524646 CDC73Q6P1J9 531 aa8.35□□□□□ -1.07
PKP3-202ENST00000524646 CNIH2Q6PI25 160 aa8.35□□□□□ -1.07
PKP3-202ENST00000524646 FRRS1Q6ZNA5 592 aa8.35□□□□□ -1.07
PKP3-202ENST00000524646 MBOAT2Q6ZWT7 520 aa8.35□□□□□ -1.07
PKP3-202ENST00000524646 PRICKLE2Q7Z3G6 844 aa8.35□□□□□ -1.07
PKP3-202ENST00000524646 C11orf74Q86VG3 221 aa8.35□□□□□ -1.07
PKP3-202ENST00000524646 GID4Q8IVV7 300 aa8.35□□□□□ -1.07
PKP3-202ENST00000524646 CCDC116Q8IYX3 515 aa8.35□□□□□ -1.07
PKP3-202ENST00000524646 ARIH2OSQ8N7S6 290 aa8.35□□□□□ -1.07
PKP3-202ENST00000524646 SIMC1Q8NDZ2 872 aa8.35□□□□□ -1.07
PKP3-202ENST00000524646 TMEM203Q969S6 136 aa8.35□□□□□ -1.07
PKP3-202ENST00000524646 ELP4Q96EB1 424 aa8.35□□□□□ -1.07
PKP3-202ENST00000524646 CHFRQ96EP1 664 aa8.35□□□□□ -1.07
PKP3-202ENST00000524646 C1GALT1C1Q96EU7 318 aa8.35□□□□□ -1.07
PKP3-202ENST00000524646 GIMAP5Q96F15 307 aa8.35□□□□□ -1.07
PKP3-202ENST00000524646 RNF170Q96K19 258 aa8.35□□□□□ -1.07
PKP3-202ENST00000524646 ZNF681Q96N22 645 aa8.35□□□□□ -1.07
PKP3-202ENST00000524646 MCHR1Q99705 422 aa8.35□□□□□ -1.07
PKP3-202ENST00000524646 TRMT61BQ9BVS5 477 aaKnown RBP8.35□□□□□ -1.07
PKP3-202ENST00000524646 KIR3DX1Q9H7L2 352 aa8.35□□□□□ -1.07
PKP3-202ENST00000524646 RNF121Q9H920 327 aa8.35□□□□□ -1.07
PKP3-202ENST00000524646 CXXC1Q9P0U4 656 aaPredicted RBP8.35□□□□□ -1.07
PKP3-202ENST00000524646 APOBEC3BQ9UH17 382 aaKnown RBP8.35□□□□□ -1.07
PKP3-202ENST00000524646 PHF11Q9UIL8 331 aa8.35□□□□□ -1.07
PKP3-202ENST00000524646 EXOGQ9Y2C4 368 aaKnown RBP8.35□□□□□ -1.07
PKP3-202ENST00000524646 SLC17A4Q9Y2C5 497 aa8.35□□□□□ -1.07
PKP3-202ENST00000524646 CHST2Q9Y4C5 530 aa8.35□□□□□ -1.07
PKP3-202ENST00000524646 HEBP2Q9Y5Z4 205 aa8.35□□□□□ -1.07
PKP3-202ENST00000524646 KCNE3Q9Y6H6 103 aa8.35□□□□□ -1.07
PKP3-202ENST00000524646 ZNF780BQ9Y6R6 833 aa8.35□□□□□ -1.07
PKP3-202ENST00000524646 SCN2AQ99250 2005 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 A0A0B4J293 547 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 LINC00854A0A1B0GVQ3 168 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 A0A1W2PS29 197 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 SMIM30A4D0T7 59 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 LINC01553A4QN01 128 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 TBC1D3BA6NDS4 549 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 TTC36A6NLP5 189 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 WASHC1A8K0Z3 465 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 A8MV72 311 aaPredicted RBP8.34□□□□□ -1.07
PKP3-202ENST00000524646 GABRPO00591 440 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 TFECO14948 347 aaPredicted RBP8.34□□□□□ -1.07
PKP3-202ENST00000524646 PROM1O43490 865 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 SLC19A2O60779 497 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 RGS9O75916 674 aaPredicted RBP8.34□□□□□ -1.07
PKP3-202ENST00000524646 KAT7O95251 611 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 LALBAP00709 142 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 HLA-DPB1P04440 258 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 HMGN1P05114 100 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 ASGR2P07307 311 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 THBS1P07996 1170 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 C8orf89P0DMQ9 161 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 C5AR1P21730 350 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 FCARP24071 287 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 MPIP34949 423 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 TRHRP34981 398 aaPredicted RBP8.34□□□□□ -1.07
PKP3-202ENST00000524646 GCGRP47871 477 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 PDX1P52945 283 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 RAB8AP61006 207 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 HOXC5Q00444 222 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 RGS1Q08116 209 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 ENPP2Q13822 863 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 FGL2Q14314 439 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 LRRC32Q14392 662 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 CDK10Q15131 360 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 RPE65Q16518 533 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 UAP1L1Q3KQV9 507 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 CLEC12AQ5QGZ9 265 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 ZNF776Q68DI1 518 aaPredicted RBP8.34□□□□□ -1.07
PKP3-202ENST00000524646 MZT2BQ6NZ67 158 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 NIPAL3Q6P499 406 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 MZT2AQ6P582 158 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 PSRC1Q6PGN9 363 aaPredicted RBP8.34□□□□□ -1.07
PKP3-202ENST00000524646 FAM111BQ6SJ93 734 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 ZNF836Q6ZNA1 936 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 RRM2BQ7LG56 351 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 GDF7Q7Z4P5 450 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 PAQR7Q86WK9 346 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 GATAD2AQ86YP4 633 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 GALNT12Q8IXK2 581 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 FAM20CQ8IXL6 584 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 NRMQ8IXM6 262 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 PEX5LQ8IYB4 626 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 SAMD14Q8IZD0 417 aaPredicted RBP8.34□□□□□ -1.07
PKP3-202ENST00000524646 SLC7A5P1Q8MH63 180 aa8.34□□□□□ -1.07
PKP3-202ENST00000524646 LRRC25Q8N386 305 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms