RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 PLEKHM3Q6ZWE6 761 aa16.73■□□□□ 0.27
IKBKB-228ENST00000523517 ARIH2OSQ8N7S6 290 aa16.73■□□□□ 0.27
IKBKB-228ENST00000523517 TMEM145Q8NBT3 493 aa16.73■□□□□ 0.27
IKBKB-228ENST00000523517 KAT2AQ92830 837 aa16.73■□□□□ 0.27
IKBKB-228ENST00000523517 FRMD6Q96NE9 622 aa16.73■□□□□ 0.27
IKBKB-228ENST00000523517 DCLRE1CQ96SD1 692 aaKnown RBP16.73■□□□□ 0.27
IKBKB-228ENST00000523517 COQ7Q99807 217 aa16.73■□□□□ 0.27
IKBKB-228ENST00000523517 SOSTQ9BQB4 213 aa16.73■□□□□ 0.27
IKBKB-228ENST00000523517 TMED9Q9BVK6 235 aa16.73■□□□□ 0.27
IKBKB-228ENST00000523517 ACTRT3Q9BYD9 372 aa16.73■□□□□ 0.27
IKBKB-228ENST00000523517 RNF121Q9H920 327 aa16.73■□□□□ 0.27
IKBKB-228ENST00000523517 SPHK1Q9NYA1 384 aa16.73■□□□□ 0.27
IKBKB-228ENST00000523517 IL20Q9NYY1 176 aa16.73■□□□□ 0.27
IKBKB-228ENST00000523517 PRKAG2Q9UGJ0 569 aa16.73■□□□□ 0.27
IKBKB-228ENST00000523517 SERGEFQ9UGK8 458 aa16.73■□□□□ 0.27
IKBKB-228ENST00000523517 EXOGQ9Y2C4 368 aaKnown RBP16.73■□□□□ 0.27
IKBKB-228ENST00000523517 ZNF780BQ9Y6R6 833 aa16.73■□□□□ 0.27
IKBKB-228ENST00000523517 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.73■□□□□ 0.27
IKBKB-228ENST00000523517 FCMRO60667 390 aa16.73■□□□□ 0.27
IKBKB-228ENST00000523517 PEBP1P30086 187 aaKnown RBP16.73■□□□□ 0.27
IKBKB-228ENST00000523517 WASP42768 502 aa16.73■□□□□ 0.27
IKBKB-228ENST00000523517 GPR4P46093 362 aa16.73■□□□□ 0.27
IKBKB-228ENST00000523517 RGS8P57771 180 aaPredicted RBP16.73■□□□□ 0.27
IKBKB-228ENST00000523517 LRRC32Q14392 662 aa16.73■□□□□ 0.27
IKBKB-228ENST00000523517 LTB4RQ15722 352 aa16.73■□□□□ 0.27
IKBKB-228ENST00000523517 CNIH2Q6PI25 160 aa16.73■□□□□ 0.27
IKBKB-228ENST00000523517 UBE2J2Q8N2K1 259 aa16.73■□□□□ 0.27
IKBKB-228ENST00000523517 MFSD9Q8NBP5 474 aa16.73■□□□□ 0.27
IKBKB-228ENST00000523517 GIMAP5Q96F15 307 aa16.73■□□□□ 0.27
IKBKB-228ENST00000523517 ZNF649Q9BS31 505 aa16.73■□□□□ 0.27
IKBKB-228ENST00000523517 SARGQ9BW04 601 aa16.73■□□□□ 0.27
IKBKB-228ENST00000523517 HDHD5Q9BXW7 423 aa16.73■□□□□ 0.27
IKBKB-228ENST00000523517 PPP1R3EQ9H7J1 279 aa16.73■□□□□ 0.27
IKBKB-228ENST00000523517 TBC1D17Q9HA65 648 aa16.73■□□□□ 0.27
IKBKB-228ENST00000523517 MED17Q9NVC6 651 aa16.73■□□□□ 0.27
IKBKB-228ENST00000523517 NUFIP1Q9UHK0 495 aaKnown RBP16.73■□□□□ 0.27
IKBKB-228ENST00000523517 KLF4O43474 513 aa16.72■□□□□ 0.27
IKBKB-228ENST00000523517 HCN1O60741 890 aa16.72■□□□□ 0.27
IKBKB-228ENST00000523517 THY1P04216 161 aa16.72■□□□□ 0.27
IKBKB-228ENST00000523517 TSFMP43897 325 aaKnown RBP16.72■□□□□ 0.27
IKBKB-228ENST00000523517 PDX1P52945 283 aa16.72■□□□□ 0.27
IKBKB-228ENST00000523517 CDK10Q15131 360 aa16.72■□□□□ 0.27
IKBKB-228ENST00000523517 PGGHGQ32M88 737 aa16.72■□□□□ 0.27
IKBKB-228ENST00000523517 C6orf132Q5T0Z8 1188 aa16.72■□□□□ 0.27
IKBKB-228ENST00000523517 GDF7Q7Z4P5 450 aa16.72■□□□□ 0.27
IKBKB-228ENST00000523517 GALNT12Q8IXK2 581 aa16.72■□□□□ 0.27
IKBKB-228ENST00000523517 NRMQ8IXM6 262 aa16.72■□□□□ 0.27
IKBKB-228ENST00000523517 KLHL36Q8N4N3 616 aa16.72■□□□□ 0.27
IKBKB-228ENST00000523517 HDDC3Q8N4P3 179 aa16.72■□□□□ 0.27
IKBKB-228ENST00000523517 SLC35A4Q96G79 324 aa16.72■□□□□ 0.27
IKBKB-228ENST00000523517 MCHR1Q99705 422 aa16.72■□□□□ 0.27
IKBKB-228ENST00000523517 ATF6BQ99941 703 aa16.72■□□□□ 0.27
IKBKB-228ENST00000523517 TRIM45Q9H8W5 580 aaPredicted RBP16.72■□□□□ 0.27
IKBKB-228ENST00000523517 DPP7Q9UHL4 492 aa16.72■□□□□ 0.27
IKBKB-228ENST00000523517 ZFR2Q9UPR6 939 aaKnown RBP16.72■□□□□ 0.27
IKBKB-228ENST00000523517 A0A0B4J293 547 aa16.72■□□□□ 0.27
IKBKB-228ENST00000523517 CHST10O43529 356 aa16.72■□□□□ 0.27
IKBKB-228ENST00000523517 AKAP8O43823 692 aaKnown RBP16.72■□□□□ 0.27
IKBKB-228ENST00000523517 HPGDSO60760 199 aa16.72■□□□□ 0.27
IKBKB-228ENST00000523517 HLA-DPB1P04440 258 aa16.72■□□□□ 0.27
IKBKB-228ENST00000523517 CEACAM5P06731 702 aa16.72■□□□□ 0.27
IKBKB-228ENST00000523517 ASGR2P07307 311 aa16.72■□□□□ 0.27
IKBKB-228ENST00000523517 GAAP10253 952 aa16.72■□□□□ 0.27
IKBKB-228ENST00000523517 SLC2A2P11168 524 aaPredicted RBP16.72■□□□□ 0.27
IKBKB-228ENST00000523517 CELP19835 753 aa16.72■□□□□ 0.27
IKBKB-228ENST00000523517 HTR1FP30939 366 aa16.72■□□□□ 0.27
IKBKB-228ENST00000523517 ACSM1Q08AH1 577 aa16.72■□□□□ 0.27
IKBKB-228ENST00000523517 COL9A2Q14055 689 aaPredicted RBP16.72■□□□□ 0.27
IKBKB-228ENST00000523517 QPRTQ15274 297 aa16.72■□□□□ 0.27
IKBKB-228ENST00000523517 C6orf183Q5T699 404 aa16.72■□□□□ 0.27
IKBKB-228ENST00000523517 ZNF620Q6ZNG0 422 aa16.72■□□□□ 0.27
IKBKB-228ENST00000523517 MBOAT2Q6ZWT7 520 aa16.72■□□□□ 0.27
IKBKB-228ENST00000523517 NRROSQ86YC3 692 aa16.72■□□□□ 0.27
IKBKB-228ENST00000523517 MARCH9Q86YJ5 346 aa16.72■□□□□ 0.27
IKBKB-228ENST00000523517 BBS1Q8NFJ9 593 aa16.72■□□□□ 0.27
IKBKB-228ENST00000523517 ENKURQ8TC29 256 aa16.72■□□□□ 0.27
IKBKB-228ENST00000523517 ADAMTS15Q8TE58 950 aa16.72■□□□□ 0.27
IKBKB-228ENST00000523517 RNF31Q96EP0 1072 aa16.72■□□□□ 0.27
IKBKB-228ENST00000523517 SLC41A3Q96GZ6 507 aa16.72■□□□□ 0.27
IKBKB-228ENST00000523517 TTYH2Q9BSA4 534 aa16.72■□□□□ 0.27
IKBKB-228ENST00000523517 PRR19A6NJB7 356 aa16.71■□□□□ 0.27
IKBKB-228ENST00000523517 RFXAPO00287 272 aa16.71■□□□□ 0.27
IKBKB-228ENST00000523517 IGHA1P01876 353 aa16.71■□□□□ 0.27
IKBKB-228ENST00000523517 HLA-DQB1P01920 261 aa16.71■□□□□ 0.27
IKBKB-228ENST00000523517 ERVK-21P61565 698 aa16.71■□□□□ 0.27
IKBKB-228ENST00000523517 BTN3A2P78410 334 aa16.71■□□□□ 0.27
IKBKB-228ENST00000523517 FAM214AQ32MH5 1076 aa16.71■□□□□ 0.27
IKBKB-228ENST00000523517 ZNF791Q3KP31 576 aaPredicted RBP16.71■□□□□ 0.27
IKBKB-228ENST00000523517 TRIQKQ629K1 86 aa16.71■□□□□ 0.27
IKBKB-228ENST00000523517 ASCC1Q8N9N2 400 aaKnown RBP16.71■□□□□ 0.27
IKBKB-228ENST00000523517 OR52N1Q8NH53 320 aa16.71■□□□□ 0.27
IKBKB-228ENST00000523517 TMEM255BQ8WV15 326 aa16.71■□□□□ 0.27
IKBKB-228ENST00000523517 SPRYD4Q8WW59 207 aaPredicted RBP16.71■□□□□ 0.27
IKBKB-228ENST00000523517 GDF15Q99988 308 aa16.71■□□□□ 0.27
IKBKB-228ENST00000523517 RSPH9Q9H1X1 276 aaPredicted RBP16.71■□□□□ 0.27
IKBKB-228ENST00000523517 MOSPD1Q9UJG1 213 aa16.71■□□□□ 0.27
IKBKB-228ENST00000523517 STON1Q9Y6Q2 735 aa16.71■□□□□ 0.27
IKBKB-228ENST00000523517 A0A1W2PP55 124 aa16.71■□□□□ 0.26
IKBKB-228ENST00000523517 GSAPA4D1B5 854 aa16.71■□□□□ 0.26
IKBKB-228ENST00000523517 A6NL46 340 aa16.71■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms