RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 OR4K17Q8NGC6 315 aa14.75□□□□□ -0.05
CLN8-206ENST00000523237 CLHC1Q8NHS4 586 aa14.75□□□□□ -0.05
CLN8-206ENST00000523237 ZPLD1Q8TCW7 415 aa14.75□□□□□ -0.05
CLN8-206ENST00000523237 AGR3Q8TD06 166 aa14.75□□□□□ -0.05
CLN8-206ENST00000523237 CIDECQ96AQ7 238 aaPredicted RBP14.75□□□□□ -0.05
CLN8-206ENST00000523237 MTERF3Q96E29 417 aa14.75□□□□□ -0.05
CLN8-206ENST00000523237 LRRC46Q96FV0 321 aa14.75□□□□□ -0.05
CLN8-206ENST00000523237 PPP3R2Q96LZ3 170 aa14.75□□□□□ -0.05
CLN8-206ENST00000523237 ZNF559Q9BR84 538 aa14.75□□□□□ -0.05
CLN8-206ENST00000523237 LMF2Q9BU23 707 aaKnown RBP14.75□□□□□ -0.05
CLN8-206ENST00000523237 TMEM109Q9BVC6 243 aa14.75□□□□□ -0.05
CLN8-206ENST00000523237 C3orf14Q9HBI5 128 aa14.75□□□□□ -0.05
CLN8-206ENST00000523237 SDHAF3Q9NRP4 125 aa14.75□□□□□ -0.05
CLN8-206ENST00000523237 SH3BP4Q9P0V3 963 aa14.75□□□□□ -0.05
CLN8-206ENST00000523237 PPP4R1LQ9P1A2 415 aa14.75□□□□□ -0.05
CLN8-206ENST00000523237 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.75□□□□□ -0.05
CLN8-206ENST00000523237 BAIAP2L1Q9UHR4 511 aa14.75□□□□□ -0.05
CLN8-206ENST00000523237 ABCG2Q9UNQ0 655 aa14.75□□□□□ -0.05
CLN8-206ENST00000523237 MRPS18CQ9Y3D5 142 aaKnown RBP14.75□□□□□ -0.05
CLN8-206ENST00000523237 V9GYY5 206 aaPredicted RBP14.75□□□□□ -0.05
CLN8-206ENST00000523237 MED12Q93074 2177 aa14.74□□□□□ -0.05
CLN8-206ENST00000523237 MBD3L4A6NDZ8 208 aaPredicted RBP14.74□□□□□ -0.05
CLN8-206ENST00000523237 MBD3L3A6NE82 208 aaPredicted RBP14.74□□□□□ -0.05
CLN8-206ENST00000523237 MBD3L5A6NJ08 208 aaPredicted RBP14.74□□□□□ -0.05
CLN8-206ENST00000523237 TMEM114B3SHH9 223 aa14.74□□□□□ -0.05
CLN8-206ENST00000523237 H0Y3Z8 333 aa14.74□□□□□ -0.05
CLN8-206ENST00000523237 SCO2O43819 266 aa14.74□□□□□ -0.05
CLN8-206ENST00000523237 ZNF500O60304 480 aaPredicted RBP14.74□□□□□ -0.05
CLN8-206ENST00000523237 IL33O95760 270 aa14.74□□□□□ -0.05
CLN8-206ENST00000523237 PRPS2P11908 318 aa14.74□□□□□ -0.05
CLN8-206ENST00000523237 MAPK1P28482 360 aa14.74□□□□□ -0.05
CLN8-206ENST00000523237 PEX19P40855 299 aa14.74□□□□□ -0.05
CLN8-206ENST00000523237 CLK3P49761 638 aaKnown RBP14.74□□□□□ -0.05
CLN8-206ENST00000523237 ASCL1P50553 236 aa14.74□□□□□ -0.05
CLN8-206ENST00000523237 MANFP55145 182 aaKnown RBP14.74□□□□□ -0.05
CLN8-206ENST00000523237 GFRA1P56159 465 aa14.74□□□□□ -0.05
CLN8-206ENST00000523237 KRTAP10-9P60411 292 aa14.74□□□□□ -0.05
CLN8-206ENST00000523237 MYBPHQ13203 477 aa14.74□□□□□ -0.05
CLN8-206ENST00000523237 VPS26BQ4G0F5 336 aa14.74□□□□□ -0.05
CLN8-206ENST00000523237 ZNF385BQ569K4 471 aa14.74□□□□□ -0.05
CLN8-206ENST00000523237 LRIG3Q6UXM1 1119 aa14.74□□□□□ -0.05
CLN8-206ENST00000523237 R3HCC1LQ7Z5L2 792 aaKnown RBP14.74□□□□□ -0.05
CLN8-206ENST00000523237 RELL2Q8NC24 303 aaPredicted RBP14.74□□□□□ -0.05
CLN8-206ENST00000523237 CEP70Q8NHQ1 597 aa14.74□□□□□ -0.05
CLN8-206ENST00000523237 MBD3L2Q8NHZ7 208 aaPredicted RBP14.74□□□□□ -0.05
CLN8-206ENST00000523237 SFXN2Q96NB2 322 aa14.74□□□□□ -0.05
CLN8-206ENST00000523237 EQTNQ9NQ60 294 aa14.74□□□□□ -0.05
CLN8-206ENST00000523237 ACSS1Q9NUB1 689 aaPredicted RBP14.74□□□□□ -0.05
CLN8-206ENST00000523237 SYT5O00445 386 aa14.73□□□□□ -0.05
CLN8-206ENST00000523237 TYROBPO43914 113 aa14.73□□□□□ -0.05
CLN8-206ENST00000523237 FADS1O60427 444 aa14.73□□□□□ -0.05
CLN8-206ENST00000523237 KCNH1O95259 989 aa14.73□□□□□ -0.05
CLN8-206ENST00000523237 BPGMP07738 259 aa14.73□□□□□ -0.05
CLN8-206ENST00000523237 BCKDHAP12694 445 aa14.73□□□□□ -0.05
CLN8-206ENST00000523237 CREB1P16220 341 aa14.73□□□□□ -0.05
CLN8-206ENST00000523237 CHMP24386 653 aa14.73□□□□□ -0.05
CLN8-206ENST00000523237 DPP4P27487 766 aa14.73□□□□□ -0.05
CLN8-206ENST00000523237 GABRA3P34903 492 aa14.73□□□□□ -0.05
CLN8-206ENST00000523237 HPCAL1P37235 193 aa14.73□□□□□ -0.05
CLN8-206ENST00000523237 RPL3P39023 403 aaKnown RBP14.73□□□□□ -0.05
CLN8-206ENST00000523237 FRKP42685 505 aaPredicted RBP14.73□□□□□ -0.05
CLN8-206ENST00000523237 RFX3P48380 749 aa14.73□□□□□ -0.05
CLN8-206ENST00000523237 ZNF136P52737 540 aa14.73□□□□□ -0.05
CLN8-206ENST00000523237 PRKAG1P54619 331 aa14.73□□□□□ -0.05
CLN8-206ENST00000523237 DLX5P56178 289 aa14.73□□□□□ -0.05
CLN8-206ENST00000523237 DSCR4P56555 118 aaPredicted RBP14.73□□□□□ -0.05
CLN8-206ENST00000523237 SRYQ05066 204 aa14.73□□□□□ -0.05
CLN8-206ENST00000523237 KRT71Q3SY84 523 aa14.73□□□□□ -0.05
CLN8-206ENST00000523237 XKR7Q5GH72 579 aa14.73□□□□□ -0.05
CLN8-206ENST00000523237 ARSKQ6UWY0 536 aa14.73□□□□□ -0.05
CLN8-206ENST00000523237 SZRD1Q7Z422 152 aa14.73□□□□□ -0.05
CLN8-206ENST00000523237 CDRT4Q8N9R6 151 aa14.73□□□□□ -0.05
CLN8-206ENST00000523237 TUBA1CQ9BQE3 449 aa14.73□□□□□ -0.05
CLN8-206ENST00000523237 PARD6BQ9BYG5 372 aa14.73□□□□□ -0.05
CLN8-206ENST00000523237 FAM120CQ9NX05 1096 aaKnown RBP14.73□□□□□ -0.05
CLN8-206ENST00000523237 L3MBTL1Q9Y468 752 aa14.73□□□□□ -0.05
CLN8-206ENST00000523237 OTOGQ6ZRI0 2925 aa14.72□□□□□ -0.05
CLN8-206ENST00000523237 ZIC3O60481 467 aa14.72□□□□□ -0.05
CLN8-206ENST00000523237 PEX11AO75192 247 aa14.72□□□□□ -0.05
CLN8-206ENST00000523237 CTSSP25774 331 aa14.72□□□□□ -0.05
CLN8-206ENST00000523237 UQCRC1P31930 480 aa14.72□□□□□ -0.05
CLN8-206ENST00000523237 OPRM1P35372 400 aa14.72□□□□□ -0.05
CLN8-206ENST00000523237 ETV4P43268 484 aa14.72□□□□□ -0.05
CLN8-206ENST00000523237 STARP49675 285 aa14.72□□□□□ -0.05
CLN8-206ENST00000523237 LHX2P50458 406 aa14.72□□□□□ -0.05
CLN8-206ENST00000523237 DGKQP52824 942 aa14.72□□□□□ -0.05
CLN8-206ENST00000523237 GANABQ14697 944 aaKnown RBP14.72□□□□□ -0.05
CLN8-206ENST00000523237 ATP6AP1LQ52LC2 224 aa14.72□□□□□ -0.05
CLN8-206ENST00000523237 TMEM200AQ86VY9 491 aa14.72□□□□□ -0.05
CLN8-206ENST00000523237 FADS6Q8N9I5 356 aa14.72□□□□□ -0.05
CLN8-206ENST00000523237 NUP43Q8NFH3 380 aa14.72□□□□□ -0.05
CLN8-206ENST00000523237 PPP1R14CQ8TAE6 165 aa14.72□□□□□ -0.05
CLN8-206ENST00000523237 GPR151Q8TDV0 419 aa14.72□□□□□ -0.05
CLN8-206ENST00000523237 HOXB13Q92826 284 aaPredicted RBP14.72□□□□□ -0.05
CLN8-206ENST00000523237 RMND5BQ96G75 393 aaPredicted RBP14.72□□□□□ -0.05
CLN8-206ENST00000523237 MS4A4EQ96PG1 132 aa14.72□□□□□ -0.05
CLN8-206ENST00000523237 SH3GL2Q99962 352 aa14.72□□□□□ -0.05
CLN8-206ENST00000523237 TBL1XR1Q9BZK7 514 aa14.72□□□□□ -0.05
CLN8-206ENST00000523237 DSN1Q9H410 356 aa14.72□□□□□ -0.05
CLN8-206ENST00000523237 PTGES2Q9H7Z7 377 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms