RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-223	ENST00000523125	LHX2	P50458	406 aa		11.23	□□□□□ -0.61
VEGFA-223	ENST00000523125	B3GALT5-AS1	P59052	145 aa		11.23	□□□□□ -0.61
VEGFA-223	ENST00000523125	PDE7A	Q13946	482 aa		11.23	□□□□□ -0.61
VEGFA-223	ENST00000523125	SF3B4	Q15427	424 aa	Known RBP eCLIP	11.23	□□□□□ -0.61	2e-10	■■■□□ 18
VEGFA-223	ENST00000523125	FBXL19-AS1	Q494R0	122 aa		11.23	□□□□□ -0.61
VEGFA-223	ENST00000523125	SH2D4B	Q5SQS7	431 aa		11.23	□□□□□ -0.61
VEGFA-223	ENST00000523125	WDR93	Q6P2C0	686 aa		11.23	□□□□□ -0.61
VEGFA-223	ENST00000523125	ARSK	Q6UWY0	536 aa		11.23	□□□□□ -0.61
VEGFA-223	ENST00000523125	ZCCHC23	Q6ZST2	131 aa		11.23	□□□□□ -0.61
VEGFA-223	ENST00000523125	IFNE	Q86WN2	208 aa		11.23	□□□□□ -0.61
VEGFA-223	ENST00000523125	FADS6	Q8N9I5	356 aa		11.23	□□□□□ -0.61
VEGFA-223	ENST00000523125	C9orf106	Q8NAJ2	232 aa		11.23	□□□□□ -0.61
VEGFA-223	ENST00000523125	OR6Y1	Q8NGX8	325 aa		11.23	□□□□□ -0.61
VEGFA-223	ENST00000523125	TCP10L	Q8TDR4	215 aa		11.23	□□□□□ -0.61
VEGFA-223	ENST00000523125	TWIST2	Q8WVJ9	160 aa		11.23	□□□□□ -0.61
VEGFA-223	ENST00000523125	HOXB13	Q92826	284 aa	Predicted RBP	11.23	□□□□□ -0.61
VEGFA-223	ENST00000523125	CAVIN3	Q969G5	261 aa		11.23	□□□□□ -0.61
VEGFA-223	ENST00000523125	TSSK3	Q96PN8	268 aa		11.23	□□□□□ -0.61
VEGFA-223	ENST00000523125	ZNF559	Q9BR84	538 aa		11.23	□□□□□ -0.61
VEGFA-223	ENST00000523125	ROPN1B	Q9BZX4	212 aa	Predicted RBP	11.23	□□□□□ -0.61
VEGFA-223	ENST00000523125	IQCG	Q9H095	443 aa	Known RBP	11.23	□□□□□ -0.61
VEGFA-223	ENST00000523125	REEP4	Q9H6H4	257 aa		11.23	□□□□□ -0.61
VEGFA-223	ENST00000523125	ROPN1	Q9HAT0	212 aa	Predicted RBP	11.23	□□□□□ -0.61
VEGFA-223	ENST00000523125	DDX18	Q9NVP1	670 aa	Known RBP	11.23	□□□□□ -0.61
VEGFA-223	ENST00000523125	TAS2R10	Q9NYW0	307 aa		11.23	□□□□□ -0.61
VEGFA-223	ENST00000523125	NTM	Q9P121	344 aa		11.23	□□□□□ -0.61
VEGFA-223	ENST00000523125	CBLC	Q9ULV8	474 aa		11.23	□□□□□ -0.61
VEGFA-223	ENST00000523125	MED13L	Q71F56	2210 aa		11.23	□□□□□ -0.61
VEGFA-223	ENST00000523125	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		11.22	□□□□□ -0.61
VEGFA-223	ENST00000523125	GXYLT2	A0PJZ3	443 aa		11.22	□□□□□ -0.61
VEGFA-223	ENST00000523125	PIP5K1B	O14986	540 aa		11.22	□□□□□ -0.61
VEGFA-223	ENST00000523125	PDPK1	O15530	556 aa		11.22	□□□□□ -0.61
VEGFA-223	ENST00000523125	TYROBP	O43914	113 aa		11.22	□□□□□ -0.61
VEGFA-223	ENST00000523125	IGKV1D-16	P01601	117 aa		11.22	□□□□□ -0.61
VEGFA-223	ENST00000523125	BCKDHA	P12694	445 aa		11.22	□□□□□ -0.61
VEGFA-223	ENST00000523125	ASCL1	P50553	236 aa		11.22	□□□□□ -0.61
VEGFA-223	ENST00000523125	CLDN18	P56856	261 aa		11.22	□□□□□ -0.61
VEGFA-223	ENST00000523125	RPL38	P63173	70 aa	Known RBP	11.22	□□□□□ -0.61
VEGFA-223	ENST00000523125	MRPS22	P82650	360 aa	Known RBP	11.22	□□□□□ -0.61
VEGFA-223	ENST00000523125	HSPB3	Q12988	150 aa		11.22	□□□□□ -0.61
VEGFA-223	ENST00000523125	MYBPH	Q13203	477 aa		11.22	□□□□□ -0.61
VEGFA-223	ENST00000523125	TESK1	Q15569	626 aa		11.22	□□□□□ -0.61
VEGFA-223	ENST00000523125	CES4A	Q5XG92	561 aa		11.22	□□□□□ -0.61
VEGFA-223	ENST00000523125	EMB	Q6PCB8	327 aa		11.22	□□□□□ -0.61
VEGFA-223	ENST00000523125	PLXDC2	Q6UX71	529 aa		11.22	□□□□□ -0.61
VEGFA-223	ENST00000523125	CDH24	Q86UP0	819 aa		11.22	□□□□□ -0.61
VEGFA-223	ENST00000523125	OR2M3	Q8NG83	312 aa		11.22	□□□□□ -0.61
VEGFA-223	ENST00000523125	CLHC1	Q8NHS4	586 aa		11.22	□□□□□ -0.61
VEGFA-223	ENST00000523125	GIMAP5	Q96F15	307 aa		11.22	□□□□□ -0.61
VEGFA-223	ENST00000523125	C3orf30	Q96M34	536 aa		11.22	□□□□□ -0.61
VEGFA-223	ENST00000523125	UCN2	Q96RP3	112 aa		11.22	□□□□□ -0.61
VEGFA-223	ENST00000523125	TMEM109	Q9BVC6	243 aa		11.22	□□□□□ -0.61
VEGFA-223	ENST00000523125	SLC24A3	Q9HC58	644 aa		11.22	□□□□□ -0.61
VEGFA-223	ENST00000523125	JKAMP	Q9P055	326 aa		11.22	□□□□□ -0.61
VEGFA-223	ENST00000523125	GIMAP2	Q9UG22	337 aa		11.22	□□□□□ -0.61
VEGFA-223	ENST00000523125	TMED5	Q9Y3A6	229 aa		11.22	□□□□□ -0.61
VEGFA-223	ENST00000523125	F8	P00451	2351 aa		11.21	□□□□□ -0.61
VEGFA-223	ENST00000523125	SCO2	O43819	266 aa		11.21	□□□□□ -0.61
VEGFA-223	ENST00000523125	CHEK2	O96017	543 aa		11.21	□□□□□ -0.61
VEGFA-223	ENST00000523125	PRPS2	P11908	318 aa		11.21	□□□□□ -0.61
VEGFA-223	ENST00000523125	ZNF708	P17019	499 aa		11.21	□□□□□ -0.61
VEGFA-223	ENST00000523125	CHM	P24386	653 aa		11.21	□□□□□ -0.61
VEGFA-223	ENST00000523125	CTSS	P25774	331 aa		11.21	□□□□□ -0.61
VEGFA-223	ENST00000523125	DPP4	P27487	766 aa		11.21	□□□□□ -0.61
VEGFA-223	ENST00000523125	UQCRC1	P31930	480 aa		11.21	□□□□□ -0.61
VEGFA-223	ENST00000523125	GABRA3	P34903	492 aa		11.21	□□□□□ -0.61
VEGFA-223	ENST00000523125	ETV4	P43268	484 aa		11.21	□□□□□ -0.61
VEGFA-223	ENST00000523125	AGFG1	P52594	562 aa	Known RBP	11.21	□□□□□ -0.61
VEGFA-223	ENST00000523125	DSCR4	P56555	118 aa	Predicted RBP	11.21	□□□□□ -0.61
VEGFA-223	ENST00000523125	SRY	Q05066	204 aa		11.21	□□□□□ -0.61
VEGFA-223	ENST00000523125	IFFO1	Q0D2I5	559 aa		11.21	□□□□□ -0.61
VEGFA-223	ENST00000523125	FOXF2	Q12947	444 aa		11.21	□□□□□ -0.61
VEGFA-223	ENST00000523125	RCAN2	Q14206	197 aa		11.21	□□□□□ -0.61
VEGFA-223	ENST00000523125	DECR1	Q16698	335 aa		11.21	□□□□□ -0.61
VEGFA-223	ENST00000523125	GALNTL6	Q49A17	601 aa		11.21	□□□□□ -0.61
VEGFA-223	ENST00000523125	XKR7	Q5GH72	579 aa		11.21	□□□□□ -0.61
VEGFA-223	ENST00000523125	ENPP6	Q6UWR7	440 aa		11.21	□□□□□ -0.61
VEGFA-223	ENST00000523125	APOOL	Q6UXV4	268 aa		11.21	□□□□□ -0.61
VEGFA-223	ENST00000523125	DDIAS	Q8IXT1	998 aa		11.21	□□□□□ -0.61
VEGFA-223	ENST00000523125	AGR3	Q8TD06	166 aa		11.21	□□□□□ -0.61
VEGFA-223	ENST00000523125	PIK3R3	Q92569	461 aa		11.21	□□□□□ -0.61
VEGFA-223	ENST00000523125	RNASE6	Q93091	150 aa	Known RBP	11.21	□□□□□ -0.61
VEGFA-223	ENST00000523125	PPCDC	Q96CD2	204 aa		11.21	□□□□□ -0.61
VEGFA-223	ENST00000523125	DSN1	Q9H410	356 aa		11.21	□□□□□ -0.61
VEGFA-223	ENST00000523125	EML4	Q9HC35	981 aa	Known RBP	11.21	□□□□□ -0.61
VEGFA-223	ENST00000523125		Q9N2J8	555 aa		11.21	□□□□□ -0.61
VEGFA-223	ENST00000523125	EQTN	Q9NQ60	294 aa		11.21	□□□□□ -0.61
VEGFA-223	ENST00000523125	ACSS1	Q9NUB1	689 aa	Predicted RBP	11.21	□□□□□ -0.61
VEGFA-223	ENST00000523125	FAM120C	Q9NX05	1096 aa	Known RBP	11.21	□□□□□ -0.61
VEGFA-223	ENST00000523125	CRIM1	Q9NZV1	1036 aa		11.21	□□□□□ -0.61
VEGFA-223	ENST00000523125	MED11	Q9P086	117 aa		11.21	□□□□□ -0.61
VEGFA-223	ENST00000523125	SH3BP4	Q9P0V3	963 aa		11.21	□□□□□ -0.61
VEGFA-223	ENST00000523125	PPP4R1L	Q9P1A2	415 aa		11.21	□□□□□ -0.61
VEGFA-223	ENST00000523125	CLCF1	Q9UBD9	225 aa		11.21	□□□□□ -0.61
VEGFA-223	ENST00000523125	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	11.21	□□□□□ -0.61	6e-10	■□□□□ 8.2
VEGFA-223	ENST00000523125	ZDHHC2	Q9UIJ5	367 aa		11.21	□□□□□ -0.61
VEGFA-223	ENST00000523125	ITGB1BP2	Q9UKP3	347 aa		11.21	□□□□□ -0.61
VEGFA-223	ENST00000523125	ABCG2	Q9UNQ0	655 aa		11.21	□□□□□ -0.61
VEGFA-223	ENST00000523125	RPH3A	Q9Y2J0	694 aa	Predicted RBP	11.21	□□□□□ -0.61
VEGFA-223	ENST00000523125		V9GYY5	206 aa	Predicted RBP	11.21	□□□□□ -0.61

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