RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 PDLIM3Q53GG5 364 aaPredicted RBP5.98□□□□□ -1.45
SDCBP-210ENST00000522843 HSP90B2PQ58FF3 399 aa5.98□□□□□ -1.45
SDCBP-210ENST00000522843 PIGGQ5H8A4 983 aa5.98□□□□□ -1.45
SDCBP-210ENST00000522843 NHSL2Q5HYW2 709 aa5.98□□□□□ -1.45
SDCBP-210ENST00000522843 THEMIS2Q5TEJ8 643 aa5.98□□□□□ -1.45
SDCBP-210ENST00000522843 BHLHB9Q6PI77 547 aa5.98□□□□□ -1.45
SDCBP-210ENST00000522843 ZNF474Q6S9Z5 364 aaPredicted RBP5.98□□□□□ -1.45
SDCBP-210ENST00000522843 HSDL2Q6YN16 418 aa5.98□□□□□ -1.45
SDCBP-210ENST00000522843 CYHR1Q6ZMK1 362 aa5.98□□□□□ -1.45
SDCBP-210ENST00000522843 GCNT2Q8N0V5 402 aa5.98□□□□□ -1.45
SDCBP-210ENST00000522843 MYO1HQ8N1T3 1032 aa5.98□□□□□ -1.45
SDCBP-210ENST00000522843 LIX1Q8N485 282 aa5.98□□□□□ -1.45
SDCBP-210ENST00000522843 PIK3C3Q8NEB9 887 aa5.98□□□□□ -1.45
SDCBP-210ENST00000522843 NT5CQ8TCD5 201 aa5.98□□□□□ -1.45
SDCBP-210ENST00000522843 UBLCP1Q8WVY7 318 aaPredicted RBP5.98□□□□□ -1.45
SDCBP-210ENST00000522843 LPGAT1Q92604 370 aa5.98□□□□□ -1.45
SDCBP-210ENST00000522843 PEX13Q92968 403 aa5.98□□□□□ -1.45
SDCBP-210ENST00000522843 INTS12Q96CB8 462 aaKnown RBP5.98□□□□□ -1.45
SDCBP-210ENST00000522843 TLCD1Q96CP7 247 aa5.98□□□□□ -1.45
SDCBP-210ENST00000522843 TUBA1CQ9BQE3 449 aa5.98□□□□□ -1.45
SDCBP-210ENST00000522843 KIFC1Q9BW19 673 aa5.98□□□□□ -1.45
SDCBP-210ENST00000522843 BEX2Q9BXY8 128 aa5.98□□□□□ -1.45
SDCBP-210ENST00000522843 IL22Q9GZX6 179 aa5.98□□□□□ -1.45
SDCBP-210ENST00000522843 SLCO5A1Q9H2Y9 848 aa5.98□□□□□ -1.45
SDCBP-210ENST00000522843 CALHM2Q9HA72 323 aa5.98□□□□□ -1.45
SDCBP-210ENST00000522843 PLAC1Q9HBJ0 212 aa5.98□□□□□ -1.45
SDCBP-210ENST00000522843 TCF7L1Q9HCS4 588 aa5.98□□□□□ -1.45
SDCBP-210ENST00000522843 SAYSD1Q9NPB0 183 aa5.98□□□□□ -1.45
SDCBP-210ENST00000522843 TMEM160Q9NX00 188 aa5.98□□□□□ -1.45
SDCBP-210ENST00000522843 ING3Q9NXR8 418 aa5.98□□□□□ -1.45
SDCBP-210ENST00000522843 PSD3Q9NYI0 1048 aa5.98□□□□□ -1.45
SDCBP-210ENST00000522843 BFARQ9NZS9 450 aa5.98□□□□□ -1.45
SDCBP-210ENST00000522843 MED16Q9Y2X0 877 aa5.98□□□□□ -1.45
SDCBP-210ENST00000522843 MMACHCQ9Y4U1 282 aa5.98□□□□□ -1.45
SDCBP-210ENST00000522843 CHCHD2Q9Y6H1 151 aaPredicted RBP5.98□□□□□ -1.45
SDCBP-210ENST00000522843 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.97□□□□□ -1.45
SDCBP-210ENST00000522843 LRRC14BA6NHZ5 514 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 H3BQF6 201 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 GFYI3L273 518 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 FAM20BO75063 409 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 CDH16O75309 829 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 SNUPNO95149 360 aaKnown RBP5.97□□□□□ -1.45
SDCBP-210ENST00000522843 ACSL3O95573 720 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 CATP04040 527 aaKnown RBP5.97□□□□□ -1.45
SDCBP-210ENST00000522843 SHBGP04278 402 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 HPNP05981 417 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 F7P08709 466 aaPredicted RBP5.97□□□□□ -1.45
SDCBP-210ENST00000522843 HRH2P25021 359 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 GDF1P27539 372 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 GCAP28676 217 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 FMO4P31512 558 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 PHBP35232 272 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 CPOXP36551 454 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 HNF4AP41235 474 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 ELK3P41970 407 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 CDK9P50750 372 aaKnown RBP5.97□□□□□ -1.45
SDCBP-210ENST00000522843 KCNJ2P63252 427 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 CD69Q07108 199 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 CDH17Q12864 832 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 ILF2Q12905 390 aaKnown RBP5.97□□□□□ -1.45
SDCBP-210ENST00000522843 NAB1Q13506 487 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 KCTD19Q17RG1 926 aaPredicted RBP5.97□□□□□ -1.45
SDCBP-210ENST00000522843 GFOD2Q3B7J2 385 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 FAM174BQ3ZCQ3 159 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 EIPR1Q53HC9 387 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 RABL3Q5HYI8 236 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 CEP85LQ5SZL2 805 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 SLC22A10Q63ZE4 541 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 OPN5Q6U736 354 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 ZNF704Q6ZNC4 412 aaPredicted RBP5.97□□□□□ -1.45
SDCBP-210ENST00000522843 MBOAT1Q6ZNC8 495 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 SH2D5Q6ZV89 423 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 IL17RELQ6ZVW7 336 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 RHOUQ7L0Q8 258 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 CLNKQ7Z7G1 428 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 LRRC6Q86X45 466 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 MEX3DQ86XN8 651 aaKnown RBP5.97□□□□□ -1.45
SDCBP-210ENST00000522843 PM20D2Q8IYS1 436 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 ZBED8Q8IZ13 594 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 ZNF611Q8N823 705 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 FBXO36Q8NEA4 188 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 OR10G3Q8NGC4 313 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 OR4K1Q8NGD4 311 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 LILRB1Q8NHL6 650 aaPredicted RBP5.97□□□□□ -1.45
SDCBP-210ENST00000522843 ZPLD1Q8TCW7 415 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 NTN5Q8WTR8 489 aaPredicted RBP5.97□□□□□ -1.45
SDCBP-210ENST00000522843 ARL8AQ96BM9 186 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 ZC3HAV1LQ96H79 300 aaKnown RBP5.97□□□□□ -1.45
SDCBP-210ENST00000522843 HIST1H2AHQ96KK5 128 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 ATP6V1G3Q96LB4 118 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 HIST1H2AJQ99878 128 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 TMEM204Q9BSN7 226 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 STMN4Q9H169 189 aaPredicted RBP5.97□□□□□ -1.45
SDCBP-210ENST00000522843 CXorf56Q9H5V9 222 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 ESRP2Q9H6T0 727 aaKnown RBP5.97□□□□□ -1.45
SDCBP-210ENST00000522843 ADAP2Q9NPF8 381 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 CCDC177Q9NQR7 707 aaPredicted RBP5.97□□□□□ -1.45
SDCBP-210ENST00000522843 CHRAC1Q9NRG0 131 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 TREX1Q9NSU2 369 aa5.97□□□□□ -1.45
SDCBP-210ENST00000522843 ZNF180Q9UJW8 692 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms