RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-208ENST00000520580 FGFRL1Q8N441 504 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 OR5L2Q8NGL0 311 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 OR1F12Q8NHA8 337 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 LMLNQ96KR4 655 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 CHP1Q99653 195 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 KRTAP4-11Q9BYQ6 195 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 POLR3FQ9H1D9 316 aaPredicted RBP3.14□□□□□ -1.91
SREK1-208ENST00000520580 EHD1Q9H4M9 534 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 TMEM185BQ9H7F4 350 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 ZDHHC18Q9NUE0 388 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 NLGN3Q9NZ94 848 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 RNF215Q9Y6U7 377 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 MROH5Q6ZUA9 1318 aa3.13□□□□□ -1.91
SREK1-208ENST00000520580 SURF4O15260 269 aa3.13□□□□□ -1.91
SREK1-208ENST00000520580 PRKNO60260 465 aaPredicted RBP3.13□□□□□ -1.91
SREK1-208ENST00000520580 MAGEC1O60732 1142 aa3.13□□□□□ -1.91
SREK1-208ENST00000520580 TOXO94900 526 aa3.13□□□□□ -1.91
SREK1-208ENST00000520580 LRATO95237 230 aa3.13□□□□□ -1.91
SREK1-208ENST00000520580 PGK1P00558 417 aa3.13□□□□□ -1.91
SREK1-208ENST00000520580 F10P00742 488 aa3.13□□□□□ -1.91
SREK1-208ENST00000520580 GAPDHP04406 335 aaKnown RBP3.13□□□□□ -1.91
SREK1-208ENST00000520580 S100A9P06702 114 aaKnown RBP3.13□□□□□ -1.91
SREK1-208ENST00000520580 DAOP14920 347 aa3.13□□□□□ -1.91
SREK1-208ENST00000520580 CASP14P31944 242 aa3.13□□□□□ -1.91
SREK1-208ENST00000520580 NF2P35240 595 aa3.13□□□□□ -1.91
SREK1-208ENST00000520580 RPS5P46782 204 aaKnown RBP3.13□□□□□ -1.91
SREK1-208ENST00000520580 SSBP2P81877 361 aaPredicted RBP3.13□□□□□ -1.91
SREK1-208ENST00000520580 POU3F1Q03052 451 aaPredicted RBP3.13□□□□□ -1.91
SREK1-208ENST00000520580 CSTF1Q05048 431 aaKnown RBP3.13□□□□□ -1.91
SREK1-208ENST00000520580 PEX6Q13608 980 aa3.13□□□□□ -1.91
SREK1-208ENST00000520580 MTF1Q14872 753 aa3.13□□□□□ -1.91
SREK1-208ENST00000520580 BTNL3Q6UXE8 466 aa3.13□□□□□ -1.91
SREK1-208ENST00000520580 SH2D5Q6ZV89 423 aa3.13□□□□□ -1.91
SREK1-208ENST00000520580 TSEN54Q7Z6J9 526 aaKnown RBP3.13□□□□□ -1.91
SREK1-208ENST00000520580 LUZP2Q86TE4 346 aa3.13□□□□□ -1.91
SREK1-208ENST00000520580 TGIF2LXQ8IUE1 241 aa3.13□□□□□ -1.91
SREK1-208ENST00000520580 CIARTQ8N365 385 aaPredicted RBP3.13□□□□□ -1.91
SREK1-208ENST00000520580 MFSD9Q8NBP5 474 aa3.13□□□□□ -1.91
SREK1-208ENST00000520580 OR1L6Q8NGR2 347 aa3.13□□□□□ -1.91
SREK1-208ENST00000520580 HCAR2Q8TDS4 363 aa3.13□□□□□ -1.91
SREK1-208ENST00000520580 MCUR1Q96AQ8 359 aa3.13□□□□□ -1.91
SREK1-208ENST00000520580 ZNF707Q96C28 371 aaPredicted RBP3.13□□□□□ -1.91
SREK1-208ENST00000520580 C10orf35Q96D05 121 aa3.13□□□□□ -1.91
SREK1-208ENST00000520580 ANKRD27Q96NW4 1050 aa3.13□□□□□ -1.91
SREK1-208ENST00000520580 MTMR9Q96QG7 549 aa3.13□□□□□ -1.91
SREK1-208ENST00000520580 FMO2Q99518 471 aa3.13□□□□□ -1.91
SREK1-208ENST00000520580 SLC39A3Q9BRY0 314 aa3.13□□□□□ -1.91
SREK1-208ENST00000520580 TRIM62Q9BVG3 475 aa3.13□□□□□ -1.91
SREK1-208ENST00000520580 IL36GQ9NZH8 169 aa3.13□□□□□ -1.91
SREK1-208ENST00000520580 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.13□□□□□ -1.91
SREK1-208ENST00000520580 KLK11Q9UBX7 282 aa3.13□□□□□ -1.91
SREK1-208ENST00000520580 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.13□□□□□ -1.91
SREK1-208ENST00000520580 RNF6Q9Y252 685 aa3.13□□□□□ -1.91
SREK1-208ENST00000520580 CACNA1IQ9P0X4 2223 aa3.13□□□□□ -1.91
SREK1-208ENST00000520580 DOCK7Q96N67 2140 aa3.13□□□□□ -1.91
SREK1-208ENST00000520580 KANK1Q14678 1352 aa3.13□□□□□ -1.91
SREK1-208ENST00000520580 NINLQ9Y2I6 1382 aa3.13□□□□□ -1.91
SREK1-208ENST00000520580 TRIP12Q14669 1992 aaPredicted RBP3.13□□□□□ -1.91
SREK1-208ENST00000520580 STK36Q9NRP7 1315 aa3.13□□□□□ -1.91
SREK1-208ENST00000520580 PPIHO43447 177 aaKnown RBP3.12□□□□□ -1.91
SREK1-208ENST00000520580 SORBS2O94875 1100 aaKnown RBP3.12□□□□□ -1.91
SREK1-208ENST00000520580 CST1P01037 141 aa3.12□□□□□ -1.91
SREK1-208ENST00000520580 OPN1LWP04000 364 aa3.12□□□□□ -1.91
SREK1-208ENST00000520580 ACADSP16219 412 aa3.12□□□□□ -1.91
SREK1-208ENST00000520580 MMP11P24347 488 aa3.12□□□□□ -1.91
SREK1-208ENST00000520580 CHMLP26374 656 aa3.12□□□□□ -1.91
SREK1-208ENST00000520580 MARK3P27448 753 aa3.12□□□□□ -1.91
SREK1-208ENST00000520580 ATP5C1P36542 298 aaKnown RBP3.12□□□□□ -1.91
SREK1-208ENST00000520580 NUP62P37198 522 aaPredicted RBP3.12□□□□□ -1.91
SREK1-208ENST00000520580 FOXG1P55316 489 aaPredicted RBP3.12□□□□□ -1.91
SREK1-208ENST00000520580 RPS15P62841 145 aaKnown RBP3.12□□□□□ -1.91
SREK1-208ENST00000520580 NTHL1P78549 312 aa3.12□□□□□ -1.91
SREK1-208ENST00000520580 ASPHQ12797 758 aa3.12□□□□□ -1.91
SREK1-208ENST00000520580 RAB35Q15286 201 aa3.12□□□□□ -1.91
SREK1-208ENST00000520580 FAM189A2Q15884 450 aa3.12□□□□□ -1.91
SREK1-208ENST00000520580 MRPL23Q16540 153 aaKnown RBP3.12□□□□□ -1.91
SREK1-208ENST00000520580 HAGHQ16775 308 aa3.12□□□□□ -1.91
SREK1-208ENST00000520580 TP53I3Q53FA7 332 aa3.12□□□□□ -1.91
SREK1-208ENST00000520580 HIKESHIQ53FT3 197 aa3.12□□□□□ -1.91
SREK1-208ENST00000520580 DMRTC1Q5HYR2 192 aa3.12□□□□□ -1.91
SREK1-208ENST00000520580 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.12□□□□□ -1.91
SREK1-208ENST00000520580 RBM23Q86U06 439 aaKnown RBP3.12□□□□□ -1.91
SREK1-208ENST00000520580 PAQR7Q86WK9 346 aa3.12□□□□□ -1.91
SREK1-208ENST00000520580 TBC1D10CQ8IV04 446 aa3.12□□□□□ -1.91
SREK1-208ENST00000520580 GVQW1Q8N7I0 195 aa3.12□□□□□ -1.91
SREK1-208ENST00000520580 OR9Q2Q8NGE9 314 aa3.12□□□□□ -1.91
SREK1-208ENST00000520580 OR1K1Q8NGR3 316 aa3.12□□□□□ -1.91
SREK1-208ENST00000520580 OR1B1Q8NGR6 318 aa3.12□□□□□ -1.91
SREK1-208ENST00000520580 MAIP1Q8WWC4 291 aa3.12□□□□□ -1.91
SREK1-208ENST00000520580 SDSLQ96GA7 329 aa3.12□□□□□ -1.91
SREK1-208ENST00000520580 PRAC1Q96KF2 57 aa3.12□□□□□ -1.91
SREK1-208ENST00000520580 CAPNS2Q96L46 248 aa3.12□□□□□ -1.91
SREK1-208ENST00000520580 CPXM1Q96SM3 734 aa3.12□□□□□ -1.91
SREK1-208ENST00000520580 DPH7Q9BTV6 452 aa3.12□□□□□ -1.91
SREK1-208ENST00000520580 PINK1Q9BXM7 581 aa3.12□□□□□ -1.91
SREK1-208ENST00000520580 SCAND2PQ9GZW5 306 aaPredicted RBP3.12□□□□□ -1.91
SREK1-208ENST00000520580 MBD2Q9UBB5 411 aa3.12□□□□□ -1.91
SREK1-208ENST00000520580 PRPF19Q9UMS4 504 aaKnown RBP3.12□□□□□ -1.91
SREK1-208ENST00000520580 TIMM10BQ9Y5J6 103 aa3.12□□□□□ -1.91
SREK1-208ENST00000520580 ALG6Q9Y672 507 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms