RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 RPS6KA1Q15418 735 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 PDK4Q16654 411 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 ANKDD1AQ495B1 522 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 NADK2Q4G0N4 442 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 ANKRD20A4Q4UJ75 823 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 TAF1BQ53T94 588 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 SFT2D3Q587I9 215 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 ODF2Q5BJF6 829 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 ZNF542PQ5EBM4 170 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 HERC4Q5GLZ8 1057 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 NHSL2Q5HYW2 709 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 OGFRL1Q5TC84 451 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 NANOGP8Q6NSW7 305 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 CDC42EP5Q6NZY7 148 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 DOK6Q6PKX4 331 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 LCLAT1Q6UWP7 414 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 C1orf186Q6ZWK4 172 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 TRMT10CQ7L0Y3 403 aaKnown RBP2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 GET4Q7L5D6 327 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 NIPA1Q7RTP0 329 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 ZNF720Q7Z2F6 126 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 ZNF571Q7Z3V5 609 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 NET1Q7Z628 596 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 ITIH5Q86UX2 942 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 ZFAND4Q86XD8 727 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 CATSPER3Q86XQ3 398 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 C12orf56Q8IXR9 622 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 SLC22A15Q8IZD6 547 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 ST13P4Q8IZP2 240 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 SYCE1Q8N0S2 351 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 METTL4Q8N3J2 472 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 ATP6V0D2Q8N8Y2 350 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 AMER3Q8N944 861 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 PRELID2Q8N945 189 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 OR10G7Q8NGN6 311 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 FBXO25Q8TCJ0 367 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 ADAMTS16Q8TE57 1224 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 FAM172AQ8WUF8 416 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 UBLCP1Q8WVY7 318 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 TAF4BQ92750 862 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 SLC35C1Q96A29 364 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 HAUS1Q96CS2 278 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 NEDD4LQ96PU5 975 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 PANX3Q96QZ0 392 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 PSMB7Q99436 277 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 FMO2Q99518 471 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 LGMNQ99538 433 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 CABLES2Q9BTV7 478 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 OSBPL10Q9BXB5 764 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 DNAI2Q9GZS0 605 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 EGLN1Q9GZT9 426 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 STMN4Q9H169 189 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 PLGRKTQ9HBL7 147 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 VAT1LQ9HCJ6 419 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 TUFT1Q9NNX1 390 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 PALMDQ9NP74 551 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 ARMCX3Q9UH62 379 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 NOCTQ9UK39 431 aaKnown RBP2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 ITM2BQ9Y287 266 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 TDRKHQ9Y2W6 561 aaKnown RBP2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 NSG2Q9Y328 171 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 UTP11Q9Y3A2 253 aaKnown RBP2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 HBS1LQ9Y450 684 aaKnown RBP2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 SCN4AP35499 1836 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 ARID2Q68CP9 1835 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 PHLPP1O60346 1717 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 COL24A1Q17RW2 1714 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 NRAPQ86VF7 1730 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 ROBO1Q9Y6N7 1651 aa2.76□□□□□ -1.97
HMGB1P41-201ENST00000520234 LTBP4Q8N2S1 1624 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 NFASCO94856 1347 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 UBE4BO95155 1302 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 IGLV3-22A0A075B6J6 115 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 C15orf38-AP3S2A0A0A6YYH1 394 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 C2orf92A0A1B0GVN3 265 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 ANTXRLA6NF34 631 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 KRTAP16-1A8MUX0 517 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 E9PMD0 336 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 F5H6K3 240 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 NPIPB9F8W1W9 429 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 K7EQD1 137 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 SOCS3O14543 225 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 RASGRF2O14827 1237 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 PGRMC2O15173 223 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 MSH4O15457 936 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 BUB1O43683 1085 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 IDH3BO43837 385 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 TYROBPO43914 113 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 CCDC22O60826 627 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 FKBP6O75344 327 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 MTRF1O75570 445 aaKnown RBP2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 KRTAP5-8O75690 187 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 DCTN3O75935 186 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 AKAP3O75969 853 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 TM7SF2O76062 418 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 PDE5AO76074 875 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 UFL1O94874 794 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 SORBS2O94875 1100 aaKnown RBP2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 SLITRK3O94933 977 aa2.75□□□□□ -1.97
HMGB1P41-201ENST00000520234 LYPLA2O95372 231 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms