RNA–Protein interactions for RNA: ENST00000520133.5

COL13A1-212, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL13A1, Length 1,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-212ENST00000520133 OR1L3Q8NH93 324 aa25.08■■□□□ 1.61
COL13A1-212ENST00000520133 SLC38A4Q969I6 547 aa25.08■■□□□ 1.61
COL13A1-212ENST00000520133 NODALQ96S42 347 aa25.08■■□□□ 1.61
COL13A1-212ENST00000520133 FOLH1BQ9HBA9 442 aa25.08■■□□□ 1.61
COL13A1-212ENST00000520133 MAN2C1Q9NTJ4 1040 aa25.08■■□□□ 1.61
COL13A1-212ENST00000520133 RNF6Q9Y252 685 aa25.08■■□□□ 1.61
COL13A1-212ENST00000520133 CLDN16Q9Y5I7 305 aa25.08■■□□□ 1.61
COL13A1-212ENST00000520133 KIAA0513O60268 411 aa25.07■■□□□ 1.6
COL13A1-212ENST00000520133 TPST2O60704 377 aa25.07■■□□□ 1.6
COL13A1-212ENST00000520133 PRAMEF2O60811 474 aa25.07■■□□□ 1.6
COL13A1-212ENST00000520133 OSMP13725 252 aa25.07■■□□□ 1.6
COL13A1-212ENST00000520133 JUNBP17275 347 aaPredicted RBP25.07■■□□□ 1.6
COL13A1-212ENST00000520133 RPS4Y1P22090 263 aaKnown RBP25.07■■□□□ 1.6
COL13A1-212ENST00000520133 GALNSP34059 522 aa25.07■■□□□ 1.6
COL13A1-212ENST00000520133 GSSP48637 474 aa25.07■■□□□ 1.6
COL13A1-212ENST00000520133 IDH2P48735 452 aaKnown RBP25.07■■□□□ 1.6
COL13A1-212ENST00000520133 ST3GAL3Q11203 375 aa25.07■■□□□ 1.6
COL13A1-212ENST00000520133 TARDBPQ13148 414 aaKnown RBP eCLIP25.07■■□□□ 1.6
COL13A1-212ENST00000520133 PMS2P3Q13401 168 aa25.07■■□□□ 1.6
COL13A1-212ENST00000520133 ZNF267Q14586 743 aaPredicted RBP25.07■■□□□ 1.6
COL13A1-212ENST00000520133 PTGES3Q15185 160 aaKnown RBP25.07■■□□□ 1.6
COL13A1-212ENST00000520133 PGBD2Q6P3X8 592 aa25.07■■□□□ 1.6
COL13A1-212ENST00000520133 MAML2Q8IZL2 1156 aaPredicted RBP25.07■■□□□ 1.6
COL13A1-212ENST00000520133 SPARTQ8N0X7 666 aa25.07■■□□□ 1.6
COL13A1-212ENST00000520133 OR1F2PQ96R84 312 aa25.07■■□□□ 1.6
COL13A1-212ENST00000520133 YIPF2Q9BWQ6 316 aa25.07■■□□□ 1.6
COL13A1-212ENST00000520133 ANKRD19PQ9H560 264 aa25.07■■□□□ 1.6
COL13A1-212ENST00000520133 ZNF768Q9H5H4 540 aaKnown RBP25.07■■□□□ 1.6
COL13A1-212ENST00000520133 FANCEQ9HB96 536 aa25.07■■□□□ 1.6
COL13A1-212ENST00000520133 RSL24D1Q9UHA3 163 aaKnown RBP25.07■■□□□ 1.6
COL13A1-212ENST00000520133 HEMK1Q9Y5R4 338 aaPredicted RBP25.07■■□□□ 1.6
COL13A1-212ENST00000520133 COMMD3-BMI1R4GMX3 469 aa25.07■■□□□ 1.6
COL13A1-212ENST00000520133 FRS3O43559 492 aa25.07■■□□□ 1.6
COL13A1-212ENST00000520133 FOLR1P15328 257 aa25.07■■□□□ 1.6
COL13A1-212ENST00000520133 CDC42P60953 191 aa25.07■■□□□ 1.6
COL13A1-212ENST00000520133 TMEM71Q6P5X7 295 aa25.07■■□□□ 1.6
COL13A1-212ENST00000520133 OR4K5Q8NGD3 323 aa25.07■■□□□ 1.6
COL13A1-212ENST00000520133 NUDT22Q9BRQ3 303 aa25.07■■□□□ 1.6
COL13A1-212ENST00000520133 ARMC7Q9H6L4 198 aa25.07■■□□□ 1.6
COL13A1-212ENST00000520133 CAPN10Q9HC96 672 aa25.07■■□□□ 1.6
COL13A1-212ENST00000520133 CCNB1IP1Q9NPC3 277 aa25.07■■□□□ 1.6
COL13A1-212ENST00000520133 CTPS2Q9NRF8 586 aa25.07■■□□□ 1.6
COL13A1-212ENST00000520133 IMPAD1Q9NX62 359 aa25.07■■□□□ 1.6
COL13A1-212ENST00000520133 AASSQ9UDR5 926 aa25.07■■□□□ 1.6
COL13A1-212ENST00000520133 MMACHCQ9Y4U1 282 aa25.07■■□□□ 1.6
COL13A1-212ENST00000520133 BRINP1O60477 761 aa25.06■■□□□ 1.6
COL13A1-212ENST00000520133 CYP7B1O75881 506 aa25.06■■□□□ 1.6
COL13A1-212ENST00000520133 IFNA16P05015 189 aa25.06■■□□□ 1.6
COL13A1-212ENST00000520133 CFIP05156 583 aa25.06■■□□□ 1.6
COL13A1-212ENST00000520133 CHMP24386 653 aa25.06■■□□□ 1.6
COL13A1-212ENST00000520133 EMDP50402 254 aa25.06■■□□□ 1.6
COL13A1-212ENST00000520133 EEF1A1P68104 462 aaKnown RBP25.06■■□□□ 1.6
COL13A1-212ENST00000520133 RAB39AQ14964 217 aa25.06■■□□□ 1.6
COL13A1-212ENST00000520133 TRAM2Q15035 370 aa25.06■■□□□ 1.6
COL13A1-212ENST00000520133 YOD1Q5VVQ6 348 aaPredicted RBP25.06■■□□□ 1.6
COL13A1-212ENST00000520133 FIGNL1Q6PIW4 674 aa25.06■■□□□ 1.6
COL13A1-212ENST00000520133 MED25Q71SY5 747 aa25.06■■□□□ 1.6
COL13A1-212ENST00000520133 UBE2FQ969M7 185 aa25.06■■□□□ 1.6
COL13A1-212ENST00000520133 NMD3Q96D46 503 aaKnown RBP25.06■■□□□ 1.6
COL13A1-212ENST00000520133 DUSP21Q9H596 190 aa25.06■■□□□ 1.6
COL13A1-212ENST00000520133 GXYLT2A0PJZ3 443 aa25.05■■□□□ 1.6
COL13A1-212ENST00000520133 CPED1A4D0V7 1026 aa25.05■■□□□ 1.6
COL13A1-212ENST00000520133 CPSF4LA6NMK7 179 aaKnown RBP25.05■■□□□ 1.6
COL13A1-212ENST00000520133 FAM20BO75063 409 aa25.05■■□□□ 1.6
COL13A1-212ENST00000520133 WBP4O75554 376 aaKnown RBP25.05■■□□□ 1.6
COL13A1-212ENST00000520133 PAX7P23759 505 aa25.05■■□□□ 1.6
COL13A1-212ENST00000520133 SSTR4P31391 388 aa25.05■■□□□ 1.6
COL13A1-212ENST00000520133 PSG6Q00889 435 aa25.05■■□□□ 1.6
COL13A1-212ENST00000520133 TEKQ02763 1124 aa25.05■■□□□ 1.6
COL13A1-212ENST00000520133 COX10Q12887 443 aa25.05■■□□□ 1.6
COL13A1-212ENST00000520133 ILKQ13418 452 aa25.05■■□□□ 1.6
COL13A1-212ENST00000520133 SQSTM1Q13501 440 aa25.05■■□□□ 1.6
COL13A1-212ENST00000520133 PEAR1Q5VY43 1037 aaPredicted RBP25.05■■□□□ 1.6
COL13A1-212ENST00000520133 AP1ARQ63HQ0 302 aa25.05■■□□□ 1.6
COL13A1-212ENST00000520133 RHOXF1Q8NHV9 184 aa25.05■■□□□ 1.6
COL13A1-212ENST00000520133 SGCDQ92629 289 aa25.05■■□□□ 1.6
COL13A1-212ENST00000520133 MCHR1Q99705 422 aa25.05■■□□□ 1.6
COL13A1-212ENST00000520133 CNPPD1Q9BV87 410 aa25.05■■□□□ 1.6
COL13A1-212ENST00000520133 POLR2J3Q9H1A7 115 aaKnown RBP25.05■■□□□ 1.6
COL13A1-212ENST00000520133 PAK1IP1Q9NWT1 392 aaPredicted RBP25.05■■□□□ 1.6
COL13A1-212ENST00000520133 FTSJ1Q9UET6 329 aa25.05■■□□□ 1.6
COL13A1-212ENST00000520133 ZDBF2Q9HCK1 2354 aa25.05■■□□□ 1.6
COL13A1-212ENST00000520133 ADAMTS9Q9P2N4 1935 aa25.05■■□□□ 1.6
COL13A1-212ENST00000520133 ZAR1LA6NP61 321 aa25.05■■□□□ 1.6
COL13A1-212ENST00000520133 MRPS14O60783 128 aaKnown RBP25.05■■□□□ 1.6
COL13A1-212ENST00000520133 GUSBP08236 651 aa25.05■■□□□ 1.6
COL13A1-212ENST00000520133 HTR1AP08908 422 aa25.05■■□□□ 1.6
COL13A1-212ENST00000520133 NID1P14543 1247 aa25.05■■□□□ 1.6
COL13A1-212ENST00000520133 IFNGR2P38484 337 aa25.05■■□□□ 1.6
COL13A1-212ENST00000520133 OR1D4P47884 311 aa25.05■■□□□ 1.6
COL13A1-212ENST00000520133 SLC35A2P78381 396 aa25.05■■□□□ 1.6
COL13A1-212ENST00000520133 ENTPD8Q5MY95 495 aa25.05■■□□□ 1.6
COL13A1-212ENST00000520133 PLEKHM3Q6ZWE6 761 aa25.05■■□□□ 1.6
COL13A1-212ENST00000520133 MORN4Q8NDC4 146 aa25.05■■□□□ 1.6
COL13A1-212ENST00000520133 ZNF540Q8NDQ6 660 aa25.05■■□□□ 1.6
COL13A1-212ENST00000520133 C7orf57Q8NEG2 295 aa25.05■■□□□ 1.6
COL13A1-212ENST00000520133 APH1BQ8WW43 257 aa25.05■■□□□ 1.6
COL13A1-212ENST00000520133 IPCEF1Q8WWN9 437 aaPredicted RBP25.05■■□□□ 1.6
COL13A1-212ENST00000520133 DIO2Q92813 273 aa25.05■■□□□ 1.6
COL13A1-212ENST00000520133 VSTM2LQ96N03 204 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms