RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 ZNF75CPQ92670 426 aaPredicted RBP17.04■□□□□ 0.32
FAM49B-208ENST00000518344 OTUB1Q96FW1 271 aaPredicted RBP17.04■□□□□ 0.32
FAM49B-208ENST00000518344 RMND5BQ96G75 393 aaPredicted RBP17.04■□□□□ 0.32
FAM49B-208ENST00000518344 UBQLN3Q9H347 655 aa17.04■□□□□ 0.32
FAM49B-208ENST00000518344 WDR55Q9H6Y2 383 aaPredicted RBP17.04■□□□□ 0.32
FAM49B-208ENST00000518344 FLRT3Q9NZU0 649 aa17.04■□□□□ 0.32
FAM49B-208ENST00000518344 SLC6A5Q9Y345 797 aa17.04■□□□□ 0.32
FAM49B-208ENST00000518344 EML6Q6ZMW3 1958 aa17.04■□□□□ 0.32
FAM49B-208ENST00000518344 TRPC5OSA6NMA1 111 aa17.03■□□□□ 0.32
FAM49B-208ENST00000518344 FIGNL2A6NMB9 653 aa17.03■□□□□ 0.32
FAM49B-208ENST00000518344 PRSS44E7EML9 344 aa17.03■□□□□ 0.32
FAM49B-208ENST00000518344 SLCO1B7G3V0H7 640 aa17.03■□□□□ 0.32
FAM49B-208ENST00000518344 SDHDO14521 159 aa17.03■□□□□ 0.32
FAM49B-208ENST00000518344 SCO2O43819 266 aa17.03■□□□□ 0.32
FAM49B-208ENST00000518344 CBR3O75828 277 aa17.03■□□□□ 0.32
FAM49B-208ENST00000518344 NKX2-2O95096 273 aa17.03■□□□□ 0.32
FAM49B-208ENST00000518344 ACP2P11117 423 aa17.03■□□□□ 0.32
FAM49B-208ENST00000518344 EPHA3P29320 983 aa17.03■□□□□ 0.32
FAM49B-208ENST00000518344 EVI2BP34910 448 aa17.03■□□□□ 0.32
FAM49B-208ENST00000518344 CCT3P49368 545 aaKnown RBP17.03■□□□□ 0.32
FAM49B-208ENST00000518344 PRIM2P49643 509 aa17.03■□□□□ 0.32
FAM49B-208ENST00000518344 C21orf58P58505 322 aa17.03■□□□□ 0.32
FAM49B-208ENST00000518344 OCRLQ01968 901 aa17.03■□□□□ 0.32
FAM49B-208ENST00000518344 WIPI1Q5MNZ9 446 aaPredicted RBP17.03■□□□□ 0.32
FAM49B-208ENST00000518344 NXNQ6DKJ4 435 aa17.03■□□□□ 0.32
FAM49B-208ENST00000518344 TMEM211Q6ICI0 200 aa17.03■□□□□ 0.32
FAM49B-208ENST00000518344 OR4F3Q6IEY1 312 aa17.03■□□□□ 0.32
FAM49B-208ENST00000518344 MFSD12Q6NUT3 480 aa17.03■□□□□ 0.32
FAM49B-208ENST00000518344 GALNT10Q86SR1 603 aa17.03■□□□□ 0.32
FAM49B-208ENST00000518344 YRDCQ86U90 279 aaKnown RBP17.03■□□□□ 0.32
FAM49B-208ENST00000518344 PLCZ1Q86YW0 608 aa17.03■□□□□ 0.32
FAM49B-208ENST00000518344 LRRC34Q8IZ02 419 aa17.03■□□□□ 0.32
FAM49B-208ENST00000518344 RPRMLQ8N4K4 120 aa17.03■□□□□ 0.32
FAM49B-208ENST00000518344 WDSUB1Q8N9V3 476 aa17.03■□□□□ 0.32
FAM49B-208ENST00000518344 SLC16A11Q8NCK7 471 aa17.03■□□□□ 0.32
FAM49B-208ENST00000518344 PHF10Q8WUB8 498 aaKnown RBP17.03■□□□□ 0.32
FAM49B-208ENST00000518344 CXorf36Q9H7Y0 433 aa17.03■□□□□ 0.32
FAM49B-208ENST00000518344 WIF1Q9Y5W5 379 aa17.03■□□□□ 0.32
FAM49B-208ENST00000518344 HMGN2P05204 90 aaKnown RBP17.02■□□□□ 0.32
FAM49B-208ENST00000518344 ALOX5P09917 674 aa17.02■□□□□ 0.32
FAM49B-208ENST00000518344 ACVR2AP27037 513 aa17.02■□□□□ 0.32
FAM49B-208ENST00000518344 MAP3K8P41279 467 aa17.02■□□□□ 0.32
FAM49B-208ENST00000518344 CLK3P49761 638 aaKnown RBP17.02■□□□□ 0.32
FAM49B-208ENST00000518344 NME5P56597 212 aa17.02■□□□□ 0.32
FAM49B-208ENST00000518344 PMPCAQ10713 525 aa17.02■□□□□ 0.32
FAM49B-208ENST00000518344 TP53BP2Q13625 1128 aa17.02■□□□□ 0.32
FAM49B-208ENST00000518344 DUSP5Q16690 384 aa17.02■□□□□ 0.32
FAM49B-208ENST00000518344 ZCCHC12Q6PEW1 402 aa17.02■□□□□ 0.32
FAM49B-208ENST00000518344 FIGNL1Q6PIW4 674 aa17.02■□□□□ 0.32
FAM49B-208ENST00000518344 MARVELD2Q8N4S9 558 aa17.02■□□□□ 0.32
FAM49B-208ENST00000518344 FAM83FQ8NEG4 500 aaPredicted RBP17.02■□□□□ 0.32
FAM49B-208ENST00000518344 HOXB13Q92826 284 aaPredicted RBP17.02■□□□□ 0.32
FAM49B-208ENST00000518344 SH3GL2Q99962 352 aa17.02■□□□□ 0.32
FAM49B-208ENST00000518344 VIPAS39Q9H9C1 493 aa17.02■□□□□ 0.32
FAM49B-208ENST00000518344 PPP4R1LQ9P1A2 415 aa17.02■□□□□ 0.32
FAM49B-208ENST00000518344 CYSRT1A8MQ03 144 aa17.01■□□□□ 0.31
FAM49B-208ENST00000518344 KLF11O14901 512 aa17.01■□□□□ 0.31
FAM49B-208ENST00000518344 FADS1O60427 444 aa17.01■□□□□ 0.31
FAM49B-208ENST00000518344 IGKV1D-16P01601 117 aa17.01■□□□□ 0.31
FAM49B-208ENST00000518344 ALDOCP09972 364 aaKnown RBP17.01■□□□□ 0.31
FAM49B-208ENST00000518344 SOAT1P35610 550 aa17.01■□□□□ 0.31
FAM49B-208ENST00000518344 KIR3DL1P43629 444 aa17.01■□□□□ 0.31
FAM49B-208ENST00000518344 GAS1P54826 345 aa17.01■□□□□ 0.31
FAM49B-208ENST00000518344 HBA1P69905 142 aa17.01■□□□□ 0.31
FAM49B-208ENST00000518344 STX5Q13190 355 aa17.01■□□□□ 0.31
FAM49B-208ENST00000518344 ART3Q13508 389 aa17.01■□□□□ 0.31
FAM49B-208ENST00000518344 LASP1Q14847 261 aaKnown RBP17.01■□□□□ 0.31
FAM49B-208ENST00000518344 SPATA19Q7Z5L4 167 aa17.01■□□□□ 0.31
FAM49B-208ENST00000518344 CAMKMTQ7Z624 323 aa17.01■□□□□ 0.31
FAM49B-208ENST00000518344 CLECL1Q8IZS7 167 aa17.01■□□□□ 0.31
FAM49B-208ENST00000518344 COX18Q8N8Q8 333 aa17.01■□□□□ 0.31
FAM49B-208ENST00000518344 OR56A1Q8NGH5 318 aa17.01■□□□□ 0.31
FAM49B-208ENST00000518344 OR5AK3PQ8NH89 298 aa17.01■□□□□ 0.31
FAM49B-208ENST00000518344 OR14L1PQ8NHC6 308 aa17.01■□□□□ 0.31
FAM49B-208ENST00000518344 PSMA8Q8TAA3 256 aa17.01■□□□□ 0.31
FAM49B-208ENST00000518344 PIWIL2Q8TC59 973 aaKnown RBP17.01■□□□□ 0.31
FAM49B-208ENST00000518344 DYDC1Q8WWB3 177 aa17.01■□□□□ 0.31
FAM49B-208ENST00000518344 SDCCAG3Q96C92 435 aa17.01■□□□□ 0.31
FAM49B-208ENST00000518344 TIMP4Q99727 224 aa17.01■□□□□ 0.31
FAM49B-208ENST00000518344 NEUROD4Q9HD90 331 aa17.01■□□□□ 0.31
FAM49B-208ENST00000518344 SDHAF3Q9NRP4 125 aa17.01■□□□□ 0.31
FAM49B-208ENST00000518344 COQ3Q9NZJ6 369 aa17.01■□□□□ 0.31
FAM49B-208ENST00000518344 FBXL2Q9UKC9 423 aa17.01■□□□□ 0.31
FAM49B-208ENST00000518344 FAF1Q9UNN5 650 aaPredicted RBP17.01■□□□□ 0.31
FAM49B-208ENST00000518344 USP9YO00507 2555 aaPredicted RBP17.01■□□□□ 0.31
FAM49B-208ENST00000518344 SETXQ7Z333 2677 aaKnown RBP17.01■□□□□ 0.31
FAM49B-208ENST00000518344 C17orf51A8MQB3 221 aa17■□□□□ 0.31
FAM49B-208ENST00000518344 HMGB1P1B2RPK0 211 aaPredicted RBP17■□□□□ 0.31
FAM49B-208ENST00000518344 ANKRD28O15084 1053 aa17■□□□□ 0.31
FAM49B-208ENST00000518344 WDR1O75083 606 aa17■□□□□ 0.31
FAM49B-208ENST00000518344 UTP20O75691 2785 aaKnown RBP17■□□□□ 0.31
FAM49B-208ENST00000518344 UTS2O95399 124 aa17■□□□□ 0.31
FAM49B-208ENST00000518344 AGAP20933 346 aa17■□□□□ 0.31
FAM49B-208ENST00000518344 GCKP35557 465 aa17■□□□□ 0.31
FAM49B-208ENST00000518344 WNT3P56703 355 aa17■□□□□ 0.31
FAM49B-208ENST00000518344 NUP107P57740 925 aa17■□□□□ 0.31
FAM49B-208ENST00000518344 UFM1P61960 85 aa17■□□□□ 0.31
FAM49B-208ENST00000518344 CDSNQ15517 529 aa17■□□□□ 0.31
FAM49B-208ENST00000518344 ANXA8L1Q5VT79 327 aa17■□□□□ 0.31
FAM49B-208ENST00000518344 SP5Q6BEB4 398 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms