RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 CAPRIN1Q14444 709 aaKnown RBP11.97□□□□□ -0.49
PABPC1-205ENST00000518196 RGNQ15493 299 aa11.97□□□□□ -0.49
PABPC1-205ENST00000518196 EXOSC6Q5RKV6 272 aaKnown RBP11.97□□□□□ -0.49
PABPC1-205ENST00000518196 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.97□□□□□ -0.49
PABPC1-205ENST00000518196 IGFL2Q6UWQ7 119 aa11.97□□□□□ -0.49
PABPC1-205ENST00000518196 IL20RBQ6UXL0 311 aa11.97□□□□□ -0.49
PABPC1-205ENST00000518196 MSRB3Q8IXL7 192 aa11.97□□□□□ -0.49
PABPC1-205ENST00000518196 PRR22Q8IZ63 422 aa11.97□□□□□ -0.49
PABPC1-205ENST00000518196 OR5D16Q8NGK9 328 aa11.97□□□□□ -0.49
PABPC1-205ENST00000518196 C9orf43Q8TAL5 461 aaPredicted RBP11.97□□□□□ -0.49
PABPC1-205ENST00000518196 PIK3R3Q92569 461 aa11.97□□□□□ -0.49
PABPC1-205ENST00000518196 HAS2Q92819 552 aa11.97□□□□□ -0.49
PABPC1-205ENST00000518196 CDS1Q92903 461 aa11.97□□□□□ -0.49
PABPC1-205ENST00000518196 TMBIM1Q969X1 311 aa11.97□□□□□ -0.49
PABPC1-205ENST00000518196 OMA1Q96E52 524 aa11.97□□□□□ -0.49
PABPC1-205ENST00000518196 OTUB1Q96FW1 271 aaPredicted RBP11.97□□□□□ -0.49
PABPC1-205ENST00000518196 HOPXQ9BPY8 73 aaPredicted RBP11.97□□□□□ -0.49
PABPC1-205ENST00000518196 TIMMDC1Q9NPL8 285 aa11.97□□□□□ -0.49
PABPC1-205ENST00000518196 PLA2G3Q9NZ20 509 aa11.97□□□□□ -0.49
PABPC1-205ENST00000518196 GMPR2Q9P2T1 348 aaKnown RBP11.97□□□□□ -0.49
PABPC1-205ENST00000518196 TNRC6AQ8NDV7 1962 aaKnown RBP11.97□□□□□ -0.49
PABPC1-205ENST00000518196 C15orf38-AP3S2A0A0A6YYH1 394 aa11.96□□□□□ -0.49
PABPC1-205ENST00000518196 GXYLT2A0PJZ3 443 aa11.96□□□□□ -0.49
PABPC1-205ENST00000518196 OR5H15A6NDH6 313 aa11.96□□□□□ -0.49
PABPC1-205ENST00000518196 TMEM247A6NEH6 219 aa11.96□□□□□ -0.49
PABPC1-205ENST00000518196 TP53I11O14683 189 aa11.96□□□□□ -0.49
PABPC1-205ENST00000518196 DPM1O60762 260 aa11.96□□□□□ -0.49
PABPC1-205ENST00000518196 ZNF354AO60765 605 aaPredicted RBP11.96□□□□□ -0.49
PABPC1-205ENST00000518196 PPM1BO75688 479 aa11.96□□□□□ -0.49
PABPC1-205ENST00000518196 OR6B1O95007 311 aa11.96□□□□□ -0.49
PABPC1-205ENST00000518196 CBX6O95503 412 aa11.96□□□□□ -0.49
PABPC1-205ENST00000518196 FAM87AP0C7U9 286 aa11.96□□□□□ -0.49
PABPC1-205ENST00000518196 GPX2P18283 190 aa11.96□□□□□ -0.49
PABPC1-205ENST00000518196 CD96P40200 585 aa11.96□□□□□ -0.49
PABPC1-205ENST00000518196 PNLIPRP2P54317 469 aa11.96□□□□□ -0.49
PABPC1-205ENST00000518196 DSTNP60981 165 aa11.96□□□□□ -0.49
PABPC1-205ENST00000518196 TUBA3CQ13748 450 aa11.96□□□□□ -0.49
PABPC1-205ENST00000518196 EFR3AQ14156 821 aa11.96□□□□□ -0.49
PABPC1-205ENST00000518196 LACTB2Q53H82 288 aaPredicted RBP11.96□□□□□ -0.49
PABPC1-205ENST00000518196 COX20Q5RI15 118 aa11.96□□□□□ -0.49
PABPC1-205ENST00000518196 NANOGP8Q6NSW7 305 aa11.96□□□□□ -0.49
PABPC1-205ENST00000518196 TUBA3EQ6PEY2 450 aa11.96□□□□□ -0.49
PABPC1-205ENST00000518196 IGFL3Q6UXB1 125 aa11.96□□□□□ -0.49
PABPC1-205ENST00000518196 NUP54Q7Z3B4 507 aa11.96□□□□□ -0.49
PABPC1-205ENST00000518196 C16orf62Q7Z3J2 963 aa11.96□□□□□ -0.49
PABPC1-205ENST00000518196 ARPINQ7Z6K5 226 aa11.96□□□□□ -0.49
PABPC1-205ENST00000518196 CYP4Z2PQ8N1L4 340 aa11.96□□□□□ -0.49
PABPC1-205ENST00000518196 BCORP1Q8N888 145 aa11.96□□□□□ -0.49
PABPC1-205ENST00000518196 OR4N2Q8NGD1 307 aa11.96□□□□□ -0.49
PABPC1-205ENST00000518196 OR8J3Q8NGG0 315 aa11.96□□□□□ -0.49
PABPC1-205ENST00000518196 DIO2Q92813 273 aa11.96□□□□□ -0.49
PABPC1-205ENST00000518196 RAB8BQ92930 207 aa11.96□□□□□ -0.49
PABPC1-205ENST00000518196 TMEM125Q96AQ2 219 aa11.96□□□□□ -0.49
PABPC1-205ENST00000518196 SPACA9Q96E40 222 aaPredicted RBP11.96□□□□□ -0.49
PABPC1-205ENST00000518196 RMND5BQ96G75 393 aaPredicted RBP11.96□□□□□ -0.49
PABPC1-205ENST00000518196 COL21A1Q96P44 957 aa11.96□□□□□ -0.49
PABPC1-205ENST00000518196 CPPED1Q9BRF8 314 aaPredicted RBP11.96□□□□□ -0.49
PABPC1-205ENST00000518196 G6PC3Q9BUM1 346 aa11.96□□□□□ -0.49
PABPC1-205ENST00000518196 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.96□□□□□ -0.49
PABPC1-205ENST00000518196 SERHL2Q9H4I8 314 aa11.96□□□□□ -0.49
PABPC1-205ENST00000518196 TRIM45Q9H8W5 580 aaPredicted RBP11.96□□□□□ -0.49
PABPC1-205ENST00000518196 NANOGQ9H9S0 305 aa11.96□□□□□ -0.49
PABPC1-205ENST00000518196 ZBTB20Q9HC78 741 aaPredicted RBP11.96□□□□□ -0.49
PABPC1-205ENST00000518196 NDE1Q9NXR1 346 aa11.96□□□□□ -0.49
PABPC1-205ENST00000518196 LRFN1Q9P244 771 aa11.96□□□□□ -0.49
PABPC1-205ENST00000518196 LIPT1Q9Y234 373 aa11.96□□□□□ -0.49
PABPC1-205ENST00000518196 AP3M1Q9Y2T2 418 aa11.96□□□□□ -0.49
PABPC1-205ENST00000518196 KCNE3Q9Y6H6 103 aa11.96□□□□□ -0.49
PABPC1-205ENST00000518196 OR6C70A6NIJ9 312 aa11.95□□□□□ -0.5
PABPC1-205ENST00000518196 FXYD1O00168 92 aa11.95□□□□□ -0.5
PABPC1-205ENST00000518196 HMGN4O00479 90 aa11.95□□□□□ -0.5
PABPC1-205ENST00000518196 HS6ST1O60243 411 aa11.95□□□□□ -0.5
PABPC1-205ENST00000518196 TSPAN2O60636 221 aa11.95□□□□□ -0.5
PABPC1-205ENST00000518196 UBOX5O94941 541 aa11.95□□□□□ -0.5
PABPC1-205ENST00000518196 KCNK2O95069 426 aa11.95□□□□□ -0.5
PABPC1-205ENST00000518196 IL33O95760 270 aa11.95□□□□□ -0.5
PABPC1-205ENST00000518196 F10P00742 488 aa11.95□□□□□ -0.5
PABPC1-205ENST00000518196 C1QCP02747 245 aa11.95□□□□□ -0.5
PABPC1-205ENST00000518196 ETFAP13804 333 aa11.95□□□□□ -0.5
PABPC1-205ENST00000518196 ATP6V1C1P21283 382 aa11.95□□□□□ -0.5
PABPC1-205ENST00000518196 LCN1P31025 176 aa11.95□□□□□ -0.5
PABPC1-205ENST00000518196 RFX3P48380 749 aa11.95□□□□□ -0.5
PABPC1-205ENST00000518196 ST13P50502 369 aaKnown RBP11.95□□□□□ -0.5
PABPC1-205ENST00000518196 MVDP53602 400 aa11.95□□□□□ -0.5
PABPC1-205ENST00000518196 MTPNP58546 118 aa11.95□□□□□ -0.5
PABPC1-205ENST00000518196 GNA13Q14344 377 aa11.95□□□□□ -0.5
PABPC1-205ENST00000518196 OR1C1Q15619 314 aa11.95□□□□□ -0.5
PABPC1-205ENST00000518196 NTRK2Q16620 822 aa11.95□□□□□ -0.5
PABPC1-205ENST00000518196 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.95□□□□□ -0.5
PABPC1-205ENST00000518196 ZNF791Q3KP31 576 aaPredicted RBP11.95□□□□□ -0.5
PABPC1-205ENST00000518196 ARHGAP11BQ3KRB8 267 aa11.95□□□□□ -0.5
PABPC1-205ENST00000518196 DCST2Q5T1A1 773 aa11.95□□□□□ -0.5
PABPC1-205ENST00000518196 ZNF468Q5VIY5 522 aaPredicted RBP11.95□□□□□ -0.5
PABPC1-205ENST00000518196 FIGNL1Q6PIW4 674 aa11.95□□□□□ -0.5
PABPC1-205ENST00000518196 C16orf89Q6UX73 402 aa11.95□□□□□ -0.5
PABPC1-205ENST00000518196 RTL4Q6ZR62 310 aa11.95□□□□□ -0.5
PABPC1-205ENST00000518196 ASB18Q6ZVZ8 466 aa11.95□□□□□ -0.5
PABPC1-205ENST00000518196 FAM13CQ8NE31 585 aa11.95□□□□□ -0.5
PABPC1-205ENST00000518196 CHDHQ8NE62 594 aaPredicted RBP11.95□□□□□ -0.5
PABPC1-205ENST00000518196 FAM110BQ8TC76 370 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms