RNA–Protein interactions for RNA: ENST00000517534.5

CTNNA1-203, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-203ENST00000517534 PIGQQ9BRB3 760 aa7.53□□□□□ -1.2
CTNNA1-203ENST00000517534 ACPTQ9BZG2 426 aa7.53□□□□□ -1.2
CTNNA1-203ENST00000517534 OPN3Q9H1Y3 402 aaPredicted RBP7.53□□□□□ -1.2
CTNNA1-203ENST00000517534 MRPL46Q9H2W6 279 aaKnown RBP7.53□□□□□ -1.2
CTNNA1-203ENST00000517534 DSN1Q9H410 356 aa7.53□□□□□ -1.2
CTNNA1-203ENST00000517534 RNF122Q9H9V4 155 aa7.53□□□□□ -1.2
CTNNA1-203ENST00000517534 FOLH1BQ9HBA9 442 aa7.53□□□□□ -1.2
CTNNA1-203ENST00000517534 SLC35C2Q9NQQ7 365 aa7.53□□□□□ -1.2
CTNNA1-203ENST00000517534 NMRK1Q9NWW6 199 aa7.53□□□□□ -1.2
CTNNA1-203ENST00000517534 KLHL28Q9NXS3 571 aa7.53□□□□□ -1.2
CTNNA1-203ENST00000517534 FLRT3Q9NZU0 649 aa7.53□□□□□ -1.2
CTNNA1-203ENST00000517534 DKKL1Q9UK85 242 aa7.53□□□□□ -1.2
CTNNA1-203ENST00000517534 ZNF337Q9Y3M9 751 aa7.53□□□□□ -1.2
CTNNA1-203ENST00000517534 USF3Q68DE3 2245 aa7.53□□□□□ -1.2
CTNNA1-203ENST00000517534 SLC22A20A6NK97 555 aa7.52□□□□□ -1.21
CTNNA1-203ENST00000517534 FAM171A2A8MVW0 826 aa7.52□□□□□ -1.21
CTNNA1-203ENST00000517534 KIAA1324LA8MWY0 1029 aaPredicted RBP7.52□□□□□ -1.21
CTNNA1-203ENST00000517534 TRIM49D1C9J1S8 452 aa7.52□□□□□ -1.21
CTNNA1-203ENST00000517534 H7C1Q1 480 aa7.52□□□□□ -1.21
CTNNA1-203ENST00000517534 EMC8O43402 210 aa7.52□□□□□ -1.21
CTNNA1-203ENST00000517534 PCDH7O60245 1069 aa7.52□□□□□ -1.21
CTNNA1-203ENST00000517534 SMPD2O60906 423 aa7.52□□□□□ -1.21
CTNNA1-203ENST00000517534 TNFRSF21O75509 655 aa7.52□□□□□ -1.21
CTNNA1-203ENST00000517534 SMNDC1O75940 238 aaKnown RBP eCLIP7.52□□□□□ -1.21
CTNNA1-203ENST00000517534 INHBAP08476 426 aa7.52□□□□□ -1.21
CTNNA1-203ENST00000517534 CD8BP10966 210 aa7.52□□□□□ -1.21
CTNNA1-203ENST00000517534 CASQ1P31415 396 aa7.52□□□□□ -1.21
CTNNA1-203ENST00000517534 SERPINB9P50453 376 aa7.52□□□□□ -1.21
CTNNA1-203ENST00000517534 ETF1P62495 437 aaKnown RBP7.52□□□□□ -1.21
CTNNA1-203ENST00000517534 PSPHP78330 225 aa7.52□□□□□ -1.21
CTNNA1-203ENST00000517534 CSTF3Q12996 717 aaKnown RBP7.52□□□□□ -1.21
CTNNA1-203ENST00000517534 GALNT18Q6P9A2 607 aa7.52□□□□□ -1.21
CTNNA1-203ENST00000517534 P4HA3Q7Z4N8 544 aa7.52□□□□□ -1.21
CTNNA1-203ENST00000517534 YTHDF3Q7Z739 585 aaKnown RBP7.52□□□□□ -1.21
CTNNA1-203ENST00000517534 SLC44A2Q8IWA5 706 aaPredicted RBP7.52□□□□□ -1.21
CTNNA1-203ENST00000517534 UBQLNLQ8IYU4 475 aa7.52□□□□□ -1.21
CTNNA1-203ENST00000517534 C17orf53Q8N3J3 647 aaPredicted RBP7.52□□□□□ -1.21
CTNNA1-203ENST00000517534 CDYL2Q8N8U2 506 aa7.52□□□□□ -1.21
CTNNA1-203ENST00000517534 GBP7Q8N8V2 638 aaPredicted RBP7.52□□□□□ -1.21
CTNNA1-203ENST00000517534 CNEP1R1Q8N9A8 125 aa7.52□□□□□ -1.21
CTNNA1-203ENST00000517534 ZNF610Q8N9Z0 462 aa7.52□□□□□ -1.21
CTNNA1-203ENST00000517534 OR4K17Q8NGC6 315 aa7.52□□□□□ -1.21
CTNNA1-203ENST00000517534 OR5M1Q8NGP8 315 aa7.52□□□□□ -1.21
CTNNA1-203ENST00000517534 DCAKDQ8WVC6 231 aa7.52□□□□□ -1.21
CTNNA1-203ENST00000517534 EXOSC8Q96B26 276 aaKnown RBP7.52□□□□□ -1.21
CTNNA1-203ENST00000517534 EFHD2Q96C19 240 aaPredicted RBP7.52□□□□□ -1.21
CTNNA1-203ENST00000517534 PIK3IP1Q96FE7 263 aa7.52□□□□□ -1.21
CTNNA1-203ENST00000517534 PGM2Q96G03 612 aa7.52□□□□□ -1.21
CTNNA1-203ENST00000517534 APIPQ96GX9 242 aa7.52□□□□□ -1.21
CTNNA1-203ENST00000517534 Q96MF0 132 aa7.52□□□□□ -1.21
CTNNA1-203ENST00000517534 PAFAH2Q99487 392 aa7.52□□□□□ -1.21
CTNNA1-203ENST00000517534 MDFIQ99750 246 aa7.52□□□□□ -1.21
CTNNA1-203ENST00000517534 CDC42EP4Q9H3Q1 356 aaKnown RBP7.52□□□□□ -1.21
CTNNA1-203ENST00000517534 SIRT5Q9NXA8 310 aa7.52□□□□□ -1.21
CTNNA1-203ENST00000517534 ELOVL5Q9NYP7 299 aa7.52□□□□□ -1.21
CTNNA1-203ENST00000517534 MED11Q9P086 117 aa7.52□□□□□ -1.21
CTNNA1-203ENST00000517534 ZNF180Q9UJW8 692 aa7.52□□□□□ -1.21
CTNNA1-203ENST00000517534 ANK2Q01484 3957 aa7.52□□□□□ -1.21
CTNNA1-203ENST00000517534 MED12LQ86YW9 2145 aa7.52□□□□□ -1.21
CTNNA1-203ENST00000517534 MXRA5Q9NR99 2828 aa7.51□□□□□ -1.21
CTNNA1-203ENST00000517534 OR2M5A3KFT3 312 aa7.51□□□□□ -1.21
CTNNA1-203ENST00000517534 TRIM64A6NGJ6 449 aa7.51□□□□□ -1.21
CTNNA1-203ENST00000517534 TRIM64BA6NI03 449 aa7.51□□□□□ -1.21
CTNNA1-203ENST00000517534 MYO1GB0I1T2 1018 aa7.51□□□□□ -1.21
CTNNA1-203ENST00000517534 C16orf97H3BN30 126 aa7.51□□□□□ -1.21
CTNNA1-203ENST00000517534 KLF4O43474 513 aa7.51□□□□□ -1.21
CTNNA1-203ENST00000517534 SCO2O43819 266 aa7.51□□□□□ -1.21
CTNNA1-203ENST00000517534 DLX3O60479 287 aa7.51□□□□□ -1.21
CTNNA1-203ENST00000517534 ULK1O75385 1050 aa7.51□□□□□ -1.21
CTNNA1-203ENST00000517534 PSMG1O95456 288 aa7.51□□□□□ -1.21
CTNNA1-203ENST00000517534 ESRRBO95718 433 aa7.51□□□□□ -1.21
CTNNA1-203ENST00000517534 KRT6AP02538 564 aa7.51□□□□□ -1.21
CTNNA1-203ENST00000517534 KRT6BP04259 564 aa7.51□□□□□ -1.21
CTNNA1-203ENST00000517534 THBDP07204 575 aa7.51□□□□□ -1.21
CTNNA1-203ENST00000517534 POU2F1P14859 743 aa7.51□□□□□ -1.21
CTNNA1-203ENST00000517534 HK1P19367 917 aa7.51□□□□□ -1.21
CTNNA1-203ENST00000517534 FPR1P21462 350 aa7.51□□□□□ -1.21
CTNNA1-203ENST00000517534 IL12BP29460 328 aa7.51□□□□□ -1.21
CTNNA1-203ENST00000517534 TIA1P31483 386 aaKnown RBP eCLIP7.51□□□□□ -1.21
CTNNA1-203ENST00000517534 EVI2BP34910 448 aa7.51□□□□□ -1.21
CTNNA1-203ENST00000517534 KRT20P35900 424 aa7.51□□□□□ -1.21
CTNNA1-203ENST00000517534 KRT6CP48668 564 aa7.51□□□□□ -1.21
CTNNA1-203ENST00000517534 CLDN20P56880 219 aa7.51□□□□□ -1.21
CTNNA1-203ENST00000517534 EEFSECP57772 596 aaKnown RBP7.51□□□□□ -1.21
CTNNA1-203ENST00000517534 SIRPAP78324 504 aa7.51□□□□□ -1.21
CTNNA1-203ENST00000517534 MRPS22P82650 360 aaKnown RBP7.51□□□□□ -1.21
CTNNA1-203ENST00000517534 OCRLQ01968 901 aa7.51□□□□□ -1.21
CTNNA1-203ENST00000517534 HEPACAMQ14CZ8 416 aa7.51□□□□□ -1.21
CTNNA1-203ENST00000517534 RASA2Q15283 850 aa7.51□□□□□ -1.21
CTNNA1-203ENST00000517534 ERCC6LQ2NKX8 1250 aa7.51□□□□□ -1.21
CTNNA1-203ENST00000517534 TMEM44Q2T9K0 475 aa7.51□□□□□ -1.21
CTNNA1-203ENST00000517534 ZNF678Q5SXM1 525 aa7.51□□□□□ -1.21
CTNNA1-203ENST00000517534 APOOLQ6UXV4 268 aa7.51□□□□□ -1.21
CTNNA1-203ENST00000517534 SYT10Q6XYQ8 523 aa7.51□□□□□ -1.21
CTNNA1-203ENST00000517534 TIFABQ6ZNK6 161 aa7.51□□□□□ -1.21
CTNNA1-203ENST00000517534 GPRIN3Q6ZVF9 776 aa7.51□□□□□ -1.21
CTNNA1-203ENST00000517534 CHMP1BQ7LBR1 199 aa7.51□□□□□ -1.21
CTNNA1-203ENST00000517534 ZNF550Q7Z398 422 aa7.51□□□□□ -1.21
CTNNA1-203ENST00000517534 SAMD14Q8IZD0 417 aaPredicted RBP7.51□□□□□ -1.21
CTNNA1-203ENST00000517534 MEIOBQ8N635 442 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms