RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 GRHL2Q6ISB3 625 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 FIGLAQ6QHK4 219 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 GDPD1Q8N9F7 314 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 OR2T33Q8NG76 320 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 DEDD2Q8WXF8 326 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 NPIPA1Q9UND3 350 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 GPR52Q9Y2T5 361 aa10.24□□□□□ -0.77
PCDHGA1-202ENST00000517417 FRS3O43559 492 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 CYP17A1P05093 508 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 TIMP2P16035 220 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 ZNF20P17024 532 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 CR2P20023 1033 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 S100GP29377 79 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 SOX9P48436 509 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 GGTA1PQ4G0N0 100 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 TMEM164Q5U3C3 297 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 FRMPD2BQ6IN97 320 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 C1orf94Q6P1W5 598 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 UBQLNLQ8IYU4 475 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 OR6N2Q8NGY6 317 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 GNPDA2Q8TDQ7 276 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 PKMYT1Q99640 499 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 POLDIP3Q9BY77 421 aaKnown RBP10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 NDUFAF4Q9P032 175 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 CCL26Q9Y258 94 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 WDR81Q562E7 1941 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 SMAD9O15198 467 aaKnown RBP10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 RNF13O43567 381 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 MT-ND5P03915 603 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 RNH1P13489 461 aaKnown RBP10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 DRD2P14416 443 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 CHMP24386 653 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 AK4P27144 223 aaPredicted RBP10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 HHEXQ03014 270 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 CRYZQ08257 329 aaKnown RBP10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 ADAM15Q13444 863 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 CDK10Q15131 360 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 LEXMQ3ZCV2 418 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 C4orf46Q504U0 113 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 IQCF2Q8IXL9 164 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 OR2L3Q8NG85 312 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 OR7G1Q8NGA0 311 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 OR8J2Q8NGG1 315 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 SUN3Q8TAQ9 357 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 NSMAFQ92636 917 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 CHMP1AQ9HD42 196 aaPredicted RBP10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 SIRT5Q9NXA8 310 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 PADI2Q9Y2J8 665 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 M0R082 166 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 EIF3FO00303 357 aaPredicted RBP10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 PLGP00747 810 aaPredicted RBP10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 THEGLP0DJG4 465 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 PGAM2P15259 253 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 HSD11B1P28845 292 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 GDI2P50395 445 aaKnown RBP10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 RASGEF1BQ0VAM2 473 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 PUS10Q3MIT2 529 aaKnown RBP10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 UNC5DQ6UXZ4 953 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 GAREM2Q75VX8 874 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 SHFQ7M4L6 423 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 C12orf40Q86WS4 652 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 NEIL3Q8TAT5 605 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 ZDHHC12Q96GR4 267 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 NEDD4LQ96PU5 975 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 GPR34Q9UPC5 381 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 TMEM5Q9Y2B1 443 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 LCTP09848 1927 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 SBF1O95248 1867 aa10.23□□□□□ -0.77
PCDHGA1-202ENST00000517417 OR5K4A6NMS3 321 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 I3L521 148 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 M0R3H8 397 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 RNASET2O00584 256 aaKnown RBP10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 TSPAN9O75954 239 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 SEMA4FO95754 770 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 CHRNB1P11230 501 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 ACVR1BP36896 505 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 PITPNAQ00169 270 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 MAPK14Q16539 360 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 C1orf189Q5VU69 101 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 FAHD1Q6P587 224 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 PAMR1Q6UXH9 720 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 RTN4RL1Q86UN2 441 aaPredicted RBP10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 ZNF683Q8IZ20 524 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 ZNF431Q8TF32 576 aaPredicted RBP10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 ZNF480Q8WV37 535 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 AKAP1Q92667 903 aaKnown RBP eCLIP10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 MOAP1Q96BY2 351 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 PITX2Q99697 317 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 GABARAPL3Q9BY60 117 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 ABI3Q9P2A4 366 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 EIF3KQ9UBQ5 218 aaKnown RBP10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 LAMP5Q9UJQ1 280 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 MAFFQ9ULX9 164 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 ZFR2Q9UPR6 939 aaKnown RBP10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 MAU2Q9Y6X3 613 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 SCN4AP35499 1836 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 ZNF670-ZNF695F2Z2N8 137 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 CRYZL1O95825 349 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 MAGEA2P43356 314 aa10.22□□□□□ -0.77
PCDHGA1-202ENST00000517417 ERVFC1P60507 584 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms