RNA–Protein interactions for RNA: ENST00000517251.1

SCARNA20.6-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 106 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.6-201ENST00000517251 NCBP2P52298 156 aaKnown RBP eCLIP3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 EFNA3P52797 238 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 MANFP55145 182 aaKnown RBP3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 WNT4P56705 351 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 CLDN2P57739 230 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 PPP1CAP62136 330 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 RPS21P63220 83 aaKnown RBP3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 OLR1P78380 273 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 IGLV3-21P80748 117 aaPredicted RBP3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 HOXC5Q00444 222 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 FABP5Q01469 135 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 ZNF45Q02386 682 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 CHRNEQ04844 493 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 ACSM1Q08AH1 577 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 SLAMF1Q13291 335 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 ITGADQ13349 1161 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 ASAH1Q13510 395 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 RUNX2Q13950 521 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 DSG2Q14126 1118 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 FAM53BQ14153 422 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 LARS2Q15031 903 aaKnown RBP3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 SPHARQ15513 63 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 BAK1Q16611 211 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 DECR1Q16698 335 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 ALG11Q2TAA5 492 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 ITPRIPL2Q3MIP1 535 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 ATAT1Q5SQI0 421 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 ZNF362Q5T0B9 420 aaPredicted RBP3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 DCST1Q5T197 706 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 ATAD3BQ5T9A4 648 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 GARNL3Q5VVW2 1013 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 DESI1Q6ICB0 168 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 ANKRD54Q6NXT1 300 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 NIPAL3Q6P499 406 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 SLC36A4Q6YBV0 504 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 THSD4Q6ZMP0 1018 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 GDPGP1Q6ZNW5 385 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 PTCHD4Q6ZW05 846 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 SPATC1Q76KD6 591 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 GDPD3Q7L5L3 318 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 SHFQ7M4L6 423 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 GDF7Q7Z4P5 450 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 ABI3BPQ7Z7G0 1075 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 SLC44A2Q8IWA5 706 aaPredicted RBP3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 LRRC25Q8N386 305 aaPredicted RBP3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 CLIP4Q8N3C7 705 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 STX19Q8N4C7 294 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 HDDC3Q8N4P3 179 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 TMEM99Q8N816 258 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 BMPERQ8N8U9 685 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 SLC16A11Q8NCK7 471 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 FAM71CQ8NEG0 241 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 PROKR2Q8NFJ6 384 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 IL17RDQ8NFM7 739 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 OR6F1Q8NGZ6 308 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 OR52N1Q8NH53 320 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 SETD6Q8TBK2 473 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 BRIX1Q8TDN6 353 aaKnown RBP3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 TMEM255BQ8WV15 326 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 RASSF5Q8WWW0 418 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 PATE1Q8WXA2 126 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 ACOT11Q8WXI4 607 aaPredicted RBP3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 CDS1Q92903 461 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 RNF166Q96A37 237 aaPredicted RBP3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 SLC25A46Q96AG3 418 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 KIAA1143Q96AT1 154 aaPredicted RBP3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 MOAP1Q96BY2 351 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 CTHRC1Q96CG8 243 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 ZG16BQ96DA0 208 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 ELP4Q96EB1 424 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 ARSGQ96EG1 525 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 SLC35A4Q96G79 324 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 C16orf58Q96GQ5 468 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 TMEM80Q96HE8 168 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 SENP5Q96HI0 755 aaPredicted RBP3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 FAM46AQ96IP4 442 aaKnown RBP3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 PGLYRP3Q96LB9 341 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 BMFQ96LC9 184 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 FAM210AQ96ND0 272 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 OR2A5Q96R48 311 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 ZNF607Q96SK3 696 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 CTRCQ99895 268 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 SLX1AQ9BQ83 275 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 ARHGAP9Q9BRR9 750 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 YIPF4Q9BSR8 244 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 MED18Q9BUE0 208 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 APOOQ9BUR5 198 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 KATNB1Q9BVA0 655 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 PRR14Q9BWN1 585 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 MND1Q9BWT6 205 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 HCAR1Q9BXC0 346 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 ASPNQ9BXN1 380 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 HOXD1Q9GZZ0 328 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 ENKD1Q9H0I2 346 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 S1PR5Q9H228 398 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 OSGEPL1Q9H4B0 414 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 ZNF556Q9HAH1 456 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 FBRSQ9HAH7 460 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 SIAEQ9HAT2 523 aa3.03□□□□□ -1.92
SCARNA20.6-201ENST00000517251 C3orf14Q9HBI5 128 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms