RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 GABARAPL1Q9H0R8 117 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 SLC26A1Q9H2B4 701 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 SOX17Q9H6I2 414 aaPredicted RBP7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 Q9N2J8 555 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 SMPD3Q9NY59 655 aaPredicted RBP7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 USE1Q9NZ43 259 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 COPS7AQ9UBW8 275 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 GPN3Q9UHW5 284 aaPredicted RBP7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 ZNF443Q9Y2A4 671 aaPredicted RBP7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 OR10H1Q9Y4A9 318 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 LOXL2Q9Y4K0 774 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 PCDHGA1Q9Y5H4 931 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 ORC6Q9Y5N6 252 aa7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 MAGED1Q9Y5V3 778 aaPredicted RBP7.09□□□□□ -1.27
SCARNA20.1-201ENST00000516009 PCNX2A6NKB5 2137 aa7.09□□□□□ -1.28
SCARNA20.1-201ENST00000516009 AGAP5A6NIR3 686 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 OR6C76A6NM76 312 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 C9J4A7 227 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 J3KTA2 159 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 M0R3H8 397 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 DLGAP1O14490 977 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 HS6ST1O60243 411 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 KIAA0513O60268 411 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 BRINP1O60477 761 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 ALOX12BO75342 701 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 GADD45GO95257 159 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 IGKV3-11P04433 115 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 CYC1P08574 325 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 JMJD7P0C870 316 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 CT45A8P0DMV1 189 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 CT45A9P0DMV2 189 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 THRBP10828 461 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 CDK4P11802 303 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 IL7RP16871 459 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 ITIH1P19827 911 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 RPS4Y1P22090 263 aaKnown RBP7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 PRKACGP22612 351 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 SLC5A2P31639 672 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 NBL1P41271 181 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 PPICP45877 212 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 RFX3P48380 749 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 RAD23AP54725 363 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 RGS8P57771 180 aaPredicted RBP7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 SMIM11AP58511 58 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 DCAF7P61962 342 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 MERTKQ12866 999 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 EPS8Q12929 822 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 RFX4Q33E94 735 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 FLYWCH1Q4VC44 716 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 LIN52Q52LA3 116 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 CT45A2Q5DJT8 189 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 NHSL2Q5HYW2 709 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 COLEC12Q5KU26 742 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 STPG1Q5TH74 334 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 CDCP2Q5VXM1 449 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 HLA-DQA1Q5Y7H0 255 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 FAAH2Q6GMR7 532 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 TCTN3Q6NUS6 607 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 MRPL14Q6P1L8 145 aaKnown RBP7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 DEF8Q6ZN54 512 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 ZNF836Q6ZNA1 936 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 LANCL3Q6ZV70 420 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 RAB11FIP2Q7L804 512 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 SLC29A4Q7RTT9 530 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 ANKRD37Q7Z713 158 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 ZNF605Q86T29 641 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 RBM45Q8IUH3 476 aaKnown RBP7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 LACC1Q8IV20 430 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 TAGAPQ8N103 731 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 MARVELD2Q8N4S9 558 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 DHRSXQ8N5I4 330 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 ZNF321PQ8N8H1 164 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 OR4N2Q8NGD1 307 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 OR4D11Q8NGI4 311 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 OR1N1Q8NGS0 311 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 ZNF721Q8TF20 911 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 GIPC3Q8TF64 312 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 PHF10Q8WUB8 498 aaKnown RBP7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 NR4A3Q92570 626 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 LIN37Q96GY3 246 aaPredicted RBP7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 DEPDC7Q96QD5 511 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 NR1H4Q96RI1 486 aaPredicted RBP7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 SPSB2Q99619 263 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 ZPBPQ9BS86 351 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 CRB3Q9BUF7 120 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 G6PC3Q9BUM1 346 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 ADI1Q9BV57 179 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 NUDT9Q9BW91 350 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 RSPO3Q9BXY4 272 aaPredicted RBP7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 ULBP3Q9BZM4 244 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 ARMC7Q9H6L4 198 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 WDR54Q9H977 334 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 SMURF2Q9HAU4 748 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 FAM86C1Q9NVL1 165 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 FBXO34Q9NWN3 711 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 PDP1Q9P0J1 537 aaPredicted RBP7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 KIF17Q9P2E2 1029 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 C19orf25Q9UFG5 118 aaPredicted RBP7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 C3orf18Q9UK00 162 aa7.08□□□□□ -1.28
SCARNA20.1-201ENST00000516009 NXT1Q9UKK6 140 aaKnown RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms