RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 HDAC3O15379 428 aa11.66□□□□□ -0.54
CLCN3-210ENST00000515420 ZNHIT1O43257 154 aa11.66□□□□□ -0.54
CLCN3-210ENST00000515420 NME6O75414 186 aaPredicted RBP11.66□□□□□ -0.54
CLCN3-210ENST00000515420 KCNH1O95259 989 aa11.66□□□□□ -0.54
CLCN3-210ENST00000515420 CYP4B1P13584 511 aa11.66□□□□□ -0.54
CLCN3-210ENST00000515420 LBPP18428 481 aa11.66□□□□□ -0.54
CLCN3-210ENST00000515420 EVI2BP34910 448 aa11.66□□□□□ -0.54
CLCN3-210ENST00000515420 PRIM2P49643 509 aa11.66□□□□□ -0.54
CLCN3-210ENST00000515420 GAS1P54826 345 aa11.66□□□□□ -0.54
CLCN3-210ENST00000515420 OCRLQ01968 901 aa11.66□□□□□ -0.54
CLCN3-210ENST00000515420 DESI1Q6ICB0 168 aa11.66□□□□□ -0.54
CLCN3-210ENST00000515420 MFSD12Q6NUT3 480 aa11.66□□□□□ -0.54
CLCN3-210ENST00000515420 PLCZ1Q86YW0 608 aa11.66□□□□□ -0.54
CLCN3-210ENST00000515420 KRTCAP2Q8N6L1 136 aa11.66□□□□□ -0.54
CLCN3-210ENST00000515420 WDSUB1Q8N9V3 476 aa11.66□□□□□ -0.54
CLCN3-210ENST00000515420 OR8J2Q8NGG1 315 aa11.66□□□□□ -0.54
CLCN3-210ENST00000515420 OR56A1Q8NGH5 318 aa11.66□□□□□ -0.54
CLCN3-210ENST00000515420 MGARPQ8TDB4 240 aa11.66□□□□□ -0.54
CLCN3-210ENST00000515420 ASB5Q8WWX0 329 aa11.66□□□□□ -0.54
CLCN3-210ENST00000515420 TESCQ96BS2 214 aa11.66□□□□□ -0.54
CLCN3-210ENST00000515420 ZBTB9Q96C00 473 aa11.66□□□□□ -0.54
CLCN3-210ENST00000515420 EFHD2Q96C19 240 aaPredicted RBP11.66□□□□□ -0.54
CLCN3-210ENST00000515420 FAM120BQ96EK7 910 aaKnown RBP11.66□□□□□ -0.54
CLCN3-210ENST00000515420 ATP6V1G3Q96LB4 118 aa11.66□□□□□ -0.54
CLCN3-210ENST00000515420 STACQ99469 402 aa11.66□□□□□ -0.54
CLCN3-210ENST00000515420 DUSP26Q9BV47 211 aa11.66□□□□□ -0.54
CLCN3-210ENST00000515420 OR2B2Q9GZK3 357 aa11.66□□□□□ -0.54
CLCN3-210ENST00000515420 SLC6A15Q9H2J7 730 aa11.66□□□□□ -0.54
CLCN3-210ENST00000515420 MANSC1Q9H8J5 431 aa11.66□□□□□ -0.54
CLCN3-210ENST00000515420 CHST11Q9NPF2 352 aa11.66□□□□□ -0.54
CLCN3-210ENST00000515420 DUSP22Q9NRW4 184 aa11.66□□□□□ -0.54
CLCN3-210ENST00000515420 PNPLA3Q9NST1 481 aa11.66□□□□□ -0.54
CLCN3-210ENST00000515420 FAM120CQ9NX05 1096 aaKnown RBP11.66□□□□□ -0.54
CLCN3-210ENST00000515420 COQ3Q9NZJ6 369 aa11.66□□□□□ -0.54
CLCN3-210ENST00000515420 SPRR3Q9UBC9 169 aa11.66□□□□□ -0.54
CLCN3-210ENST00000515420 UNC79Q9P2D8 2635 aa11.65□□□□□ -0.54
CLCN3-210ENST00000515420 FAM47E-STBD1D6RA91 191 aa11.65□□□□□ -0.54
CLCN3-210ENST00000515420 RNASET2O00584 256 aaKnown RBP11.65□□□□□ -0.54
CLCN3-210ENST00000515420 FADS1O60427 444 aa11.65□□□□□ -0.54
CLCN3-210ENST00000515420 TRAPPC6AO75865 159 aa11.65□□□□□ -0.54
CLCN3-210ENST00000515420 CLDN14O95500 239 aa11.65□□□□□ -0.54
CLCN3-210ENST00000515420 NGFRP08138 427 aa11.65□□□□□ -0.54
CLCN3-210ENST00000515420 KRT16P08779 473 aa11.65□□□□□ -0.54
CLCN3-210ENST00000515420 H2AFXP16104 143 aaPredicted RBP11.65□□□□□ -0.54
CLCN3-210ENST00000515420 SRD5A2P31213 254 aa11.65□□□□□ -0.54
CLCN3-210ENST00000515420 GABRA3P34903 492 aa11.65□□□□□ -0.54
CLCN3-210ENST00000515420 GCKP35557 465 aa11.65□□□□□ -0.54
CLCN3-210ENST00000515420 CLK3P49761 638 aaKnown RBP11.65□□□□□ -0.54
CLCN3-210ENST00000515420 CLNS1AP54105 237 aaKnown RBP11.65□□□□□ -0.54
CLCN3-210ENST00000515420 DIO3P55073 304 aa11.65□□□□□ -0.54
CLCN3-210ENST00000515420 CRYZQ08257 329 aaKnown RBP11.65□□□□□ -0.54
CLCN3-210ENST00000515420 SF3B4Q15427 424 aaKnown RBP eCLIP11.65□□□□□ -0.54
CLCN3-210ENST00000515420 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.65□□□□□ -0.54
CLCN3-210ENST00000515420 ZNF630Q2M218 657 aaPredicted RBP11.65□□□□□ -0.54
CLCN3-210ENST00000515420 VASNQ6EMK4 673 aa11.65□□□□□ -0.54
CLCN3-210ENST00000515420 BHLHB9Q6PI77 547 aa11.65□□□□□ -0.54
CLCN3-210ENST00000515420 B3GNT6Q6ZMB0 384 aa11.65□□□□□ -0.54
CLCN3-210ENST00000515420 C3P1Q6ZMU1 363 aa11.65□□□□□ -0.54
CLCN3-210ENST00000515420 HDXQ7Z353 690 aa11.65□□□□□ -0.54
CLCN3-210ENST00000515420 SZRD1Q7Z422 152 aa11.65□□□□□ -0.54
CLCN3-210ENST00000515420 PM20D2Q8IYS1 436 aa11.65□□□□□ -0.54
CLCN3-210ENST00000515420 MARVELD2Q8N4S9 558 aa11.65□□□□□ -0.54
CLCN3-210ENST00000515420 FAM83FQ8NEG4 500 aaPredicted RBP11.65□□□□□ -0.54
CLCN3-210ENST00000515420 GPR151Q8TDV0 419 aa11.65□□□□□ -0.54
CLCN3-210ENST00000515420 RND1Q92730 232 aa11.65□□□□□ -0.54
CLCN3-210ENST00000515420 PPP1R36Q96LQ0 422 aa11.65□□□□□ -0.54
CLCN3-210ENST00000515420 SH3GL2Q99962 352 aa11.65□□□□□ -0.54
CLCN3-210ENST00000515420 PRDM14Q9GZV8 571 aa11.65□□□□□ -0.54
CLCN3-210ENST00000515420 EQTNQ9NQ60 294 aa11.65□□□□□ -0.54
CLCN3-210ENST00000515420 SDHAF3Q9NRP4 125 aa11.65□□□□□ -0.54
CLCN3-210ENST00000515420 ZCCHC3Q9NUD5 404 aaKnown RBP11.65□□□□□ -0.54
CLCN3-210ENST00000515420 PNPOQ9NVS9 261 aa11.65□□□□□ -0.54
CLCN3-210ENST00000515420 C15orf38-AP3S2A0A0A6YYH1 394 aa11.64□□□□□ -0.55
CLCN3-210ENST00000515420 AHRRA9YTQ3 701 aa11.64□□□□□ -0.55
CLCN3-210ENST00000515420 PRSS44E7EML9 344 aa11.64□□□□□ -0.55
CLCN3-210ENST00000515420 SDHDO14521 159 aa11.64□□□□□ -0.55
CLCN3-210ENST00000515420 ANKRD28O15084 1053 aa11.64□□□□□ -0.55
CLCN3-210ENST00000515420 C6orf47O95873 294 aa11.64□□□□□ -0.55
CLCN3-210ENST00000515420 ACTL6AO96019 429 aa11.64□□□□□ -0.55
CLCN3-210ENST00000515420 ALOX5P09917 674 aa11.64□□□□□ -0.55
CLCN3-210ENST00000515420 ACP2P11117 423 aa11.64□□□□□ -0.55
CLCN3-210ENST00000515420 CHRNB4P30926 498 aa11.64□□□□□ -0.55
CLCN3-210ENST00000515420 TRPC1P48995 793 aa11.64□□□□□ -0.55
CLCN3-210ENST00000515420 CCT3P49368 545 aaKnown RBP11.64□□□□□ -0.55
CLCN3-210ENST00000515420 PRKAG1P54619 331 aa11.64□□□□□ -0.55
CLCN3-210ENST00000515420 GANABQ14697 944 aaKnown RBP11.64□□□□□ -0.55
CLCN3-210ENST00000515420 SPATA19Q7Z5L4 167 aa11.64□□□□□ -0.55
CLCN3-210ENST00000515420 WDR53Q7Z5U6 358 aaPredicted RBP11.64□□□□□ -0.55
CLCN3-210ENST00000515420 ULK2Q8IYT8 1036 aa11.64□□□□□ -0.55
CLCN3-210ENST00000515420 SLC16A11Q8NCK7 471 aa11.64□□□□□ -0.55
CLCN3-210ENST00000515420 OR5M9Q8NGP3 310 aa11.64□□□□□ -0.55
CLCN3-210ENST00000515420 PIWIL2Q8TC59 973 aaKnown RBP11.64□□□□□ -0.55
CLCN3-210ENST00000515420 FAM110BQ8TC76 370 aa11.64□□□□□ -0.55
CLCN3-210ENST00000515420 SLC9A6Q92581 669 aa11.64□□□□□ -0.55
CLCN3-210ENST00000515420 ARL8AQ96BM9 186 aa11.64□□□□□ -0.55
CLCN3-210ENST00000515420 RMND5BQ96G75 393 aaPredicted RBP11.64□□□□□ -0.55
CLCN3-210ENST00000515420 MAELQ96JY0 434 aaKnown RBP11.64□□□□□ -0.55
CLCN3-210ENST00000515420 TIMP4Q99727 224 aa11.64□□□□□ -0.55
CLCN3-210ENST00000515420 TTYH2Q9BSA4 534 aa11.64□□□□□ -0.55
CLCN3-210ENST00000515420 G6PC3Q9BUM1 346 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms