RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 JADE3Q92613 823 aa11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 DIO2Q92813 273 aa11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 CDS1Q92903 461 aa11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 AGAP4Q96P64 663 aa11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 RASL10BQ96S79 203 aa11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 SECISBP2Q96T21 854 aaKnown RBP11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 CDRT15Q96T59 188 aa11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 SDF2Q99470 211 aa11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 SMAD5Q99717 465 aaKnown RBP11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 YIPF4Q9BSR8 244 aa11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 ZNF350Q9GZX5 532 aa11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 ALG2Q9H553 416 aa11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 CPNE5Q9HCH3 593 aa11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 WDR70Q9NW82 654 aa11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 OR10H1Q9Y4A9 318 aa11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 PCDHGB7Q9Y5F8 929 aa11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 NPFFR2Q9Y5X5 522 aa11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 KCNE3Q9Y6H6 103 aa11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 CELSR3Q9NYQ7 3312 aa11.05□□□□□ -0.64
PDLIM5-220ENST00000514830 GXYLT2A0PJZ3 443 aa11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 PRAMEF27A3QJZ7 478 aa11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 TMEM247A6NEH6 219 aa11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 PRORSD1PA6NEY8 169 aa11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 MASP2O00187 686 aa11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 ATXN7O15265 892 aaPredicted RBP11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 RRP9O43818 475 aaKnown RBP11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 ZNF354AO60765 605 aaPredicted RBP11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 NME6O75414 186 aaPredicted RBP11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 STX11O75558 287 aa11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 PPM1BO75688 479 aa11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 DNAJC8O75937 253 aaPredicted RBP11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 NUDT7P0C024 238 aa11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 PCGF2P35227 344 aa11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 GSK3BP49841 420 aa11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 SSR4P51571 173 aa11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 CRISP3P54108 245 aa11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 LIPEQ05469 1076 aa11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 MFAP5Q13361 173 aa11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 EFR3AQ14156 821 aa11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 NTRK2Q16620 822 aa11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 CYP51A1Q16850 503 aa11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 VMACQ2NL98 169 aa11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 ZNF791Q3KP31 576 aaPredicted RBP11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 DCST2Q5T1A1 773 aa11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 REEP3Q6NUK4 255 aa11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 PGM2L1Q6PCE3 622 aa11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 ISLR2Q6UXK2 745 aa11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 CCDC80Q76M96 950 aa11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 NUP54Q7Z3B4 507 aa11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 C16orf62Q7Z3J2 963 aa11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 WDR53Q7Z5U6 358 aaPredicted RBP11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 PTRH1Q86Y79 214 aaKnown RBP11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 HPS6Q86YV9 775 aa11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 BCORP1Q8N888 145 aa11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 OR2T12Q8NG77 320 aa11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 OR4N2Q8NGD1 307 aa11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 PIK3R3Q92569 461 aa11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 TTC9Q92623 222 aa11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 RAB8BQ92930 207 aa11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 NTNG2Q96CW9 530 aa11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 TRIM8Q9BZR9 551 aa11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 MUC13Q9H3R2 512 aa11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 CDCP1Q9H5V8 836 aa11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 ZNF552Q9H707 407 aaPredicted RBP11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 ABI3Q9P2A4 366 aa11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 SUCOQ9UBS9 1254 aaKnown RBP11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 PCDHGA10Q9Y5H3 936 aa11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 MGAQ8IWI9 3026 aa11.04□□□□□ -0.64
PDLIM5-220ENST00000514830 A0A0G2JPF8 293 aa11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 ELOVL7A1L3X0 281 aa11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 A8MUI8 341 aa11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 HNRNPCL2B2RXH8 293 aa11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 HNRNPCL3B7ZW38 293 aa11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 NPIPB9F8W1W9 429 aa11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 WWP2O00308 870 aa11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 GSC2O15499 205 aa11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 IGKV1D-16P01601 117 aa11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 ALPPP05187 535 aa11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 HNRNPCL4P0DMR1 293 aa11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 ETS2P15036 469 aa11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 HLCSP50747 726 aa11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 CASP9P55211 416 aa11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 PCBP3P57721 371 aaKnown RBP11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 CDK6Q00534 326 aa11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 PLCXD2Q0VAA5 305 aa11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 BNIP2Q12982 314 aa11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 CEACAM7Q14002 265 aa11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 INTS11Q5TA45 600 aaKnown RBP11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 ABHD17BQ5VST6 288 aa11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 IGFL3Q6UXB1 125 aa11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 MICU2Q8IYU8 434 aa11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 SIRT6Q8N6T7 355 aa11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 GOLM1Q8NBJ4 401 aa11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 HIPK4Q8NE63 616 aa11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 OR52E4Q8NGH9 312 aa11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 BBS10Q8TAM1 723 aa11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 FBXO30Q8TB52 745 aa11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 THAP3Q8WTV1 239 aaPredicted RBP11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 TMBIM1Q969X1 311 aa11.03□□□□□ -0.64
PDLIM5-220ENST00000514830 SPACA9Q96E40 222 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms