RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 AGAP14A8MT82 685 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 ARHGEF33A8MVX0 844 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 H3BQ06 376 aaPredicted RBP7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 ADAMDEC1O15204 470 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 FFAR2O15552 330 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 SELENOFO60613 162 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 SDC3O75056 442 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 ERN1O75460 977 aaKnown RBP7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 CLDN7O95471 211 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 GLUD1P00367 558 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 IFNA10P01566 189 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 PF4V1P10720 104 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 RNH1P13489 461 aaKnown RBP7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 BPIP17213 487 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 TUBG1P23258 451 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 ITGA3P26006 1051 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 ACRV1P26436 265 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 PPP2R1BP30154 601 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 POLR2JP52435 117 aaKnown RBP7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 NCS1P62166 190 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 GTF2H2Q13888 395 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 CLINT1Q14677 625 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 ABRAXAS2Q15018 415 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 TATDN3Q17R31 274 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 SLC5A12Q1EHB4 618 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 PYCR3Q53H96 274 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 SPANXN2Q5MJ10 180 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 GTF2H2CQ6P1K8 395 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 GAREM2Q75VX8 874 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 RGL4Q8IZJ4 473 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 CLDN19Q8N6F1 224 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 DENND6BQ8NEG7 585 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 NUDT10Q8NFP7 164 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 SETD6Q8TBK2 473 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 STK35Q8TDR2 534 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 C16orf78Q8WTQ4 265 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 RHBDF1Q96CC6 855 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 EGFL8Q99944 293 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 OCSTAMPQ9BR26 566 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 POLDIP3Q9BY77 421 aaKnown RBP7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 SLC6A16Q9GZN6 736 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 DUSP15Q9H1R2 295 aaPredicted RBP7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 NSUN3Q9H649 340 aaKnown RBP7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 KCNK12Q9HB15 430 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 TUBG2Q9NRH3 451 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 PAK1IP1Q9NWT1 392 aaPredicted RBP7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 MED11Q9P086 117 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 KIF25Q9UIL4 384 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 TBC1D24Q9ULP9 559 aa7.05□□□□□ -1.28
PDLIM5-219ENST00000514743 A0A1W2PRB8 838 aa7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 SOX15O60248 233 aa7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 AKR7A3O95154 331 aa7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 SLC34A2O95436 690 aa7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 PTBP3O95758 552 aaKnown RBP7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 PNPP00491 289 aa7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 ELK4P28324 431 aa7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 CD70P32970 193 aa7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 SERPINF1P36955 418 aa7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 TGFBR2P37173 567 aa7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 NR0B1P51843 470 aaKnown RBP7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 SMSP52788 366 aa7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 PRRX1P54821 245 aa7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 MRPL49Q13405 166 aaKnown RBP7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 CDH18Q13634 790 aa7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 PCGF3Q3KNV8 242 aa7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 GPRC6AQ5T6X5 926 aa7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 ACSM5Q6NUN0 579 aa7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 TMEM88Q6PEY1 159 aa7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 CERS6Q6ZMG9 384 aa7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 SHFQ7M4L6 423 aa7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 TSPAN33Q86UF1 283 aa7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 DCUN1D3Q8IWE4 304 aa7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 CMTR2Q8IYT2 770 aaKnown RBP7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 OR10A7Q8NGE5 316 aa7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 OR8D4Q8NGM9 314 aa7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 LIPHQ8WWY8 451 aa7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 MARS2Q96GW9 593 aaKnown RBP7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 MRGPRX4Q96LA9 322 aa7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 ZFYVE1Q9HBF4 777 aa7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 CD320Q9NPF0 282 aa7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 KRT84Q9NSB2 600 aa7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 MED17Q9NVC6 651 aa7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 OPTCQ9UBM4 332 aa7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 ANAPC2Q9UJX6 822 aa7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 OAZ3Q9UMX2 235 aa7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 OARD1Q9Y530 152 aa7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 C5orf42Q9H799 3197 aa7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 LRRK1Q38SD2 2015 aa7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 PNMA8CA0A1B0GUJ8 204 aa7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 TCRBV16S1A1N1A0A5B0 115 aa7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 NPIPB15A6NHN6 443 aaPredicted RBP7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 UBE2CO00762 179 aa7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 PRRG1O14668 218 aa7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 DLEU1O43261 78 aa7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 FADS1O60427 444 aa7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 VAMP5O95183 116 aa7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 ERCC1P07992 297 aaPredicted RBP7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 NPSP0C0P6 89 aa7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 G6PDP11413 515 aa7.04□□□□□ -1.28
PDLIM5-219ENST00000514743 IRS1P35568 1242 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms