RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 FBXL2Q9UKC9 423 aa12.52□□□□□ -0.41
SPCS3-204ENST00000513139 CDC42EP3Q9UKI2 254 aa12.52□□□□□ -0.41
SPCS3-204ENST00000513139 PROCRQ9UNN8 238 aa12.52□□□□□ -0.41
SPCS3-204ENST00000513139 LAMP3Q9UQV4 416 aa12.52□□□□□ -0.41
SPCS3-204ENST00000513139 H0YIV9 168 aa12.51□□□□□ -0.41
SPCS3-204ENST00000513139 GOLGA8RI6L899 631 aa12.51□□□□□ -0.41
SPCS3-204ENST00000513139 LINC01387J3KSC0 135 aa12.51□□□□□ -0.41
SPCS3-204ENST00000513139 H2AFXP16104 143 aaPredicted RBP12.51□□□□□ -0.41
SPCS3-204ENST00000513139 PORP16435 677 aaPredicted RBP12.51□□□□□ -0.41
SPCS3-204ENST00000513139 EPB42P16452 691 aa12.51□□□□□ -0.41
SPCS3-204ENST00000513139 NT5EP21589 574 aa12.51□□□□□ -0.41
SPCS3-204ENST00000513139 DPP4P27487 766 aa12.51□□□□□ -0.41
SPCS3-204ENST00000513139 THBS2P35442 1172 aa12.51□□□□□ -0.41
SPCS3-204ENST00000513139 PPICP45877 212 aa12.51□□□□□ -0.41
SPCS3-204ENST00000513139 MMP16P51512 607 aa12.51□□□□□ -0.41
SPCS3-204ENST00000513139 B3GALT5-AS1P59052 145 aa12.51□□□□□ -0.41
SPCS3-204ENST00000513139 ZNF844Q08AG5 666 aa12.51□□□□□ -0.41
SPCS3-204ENST00000513139 NNATQ16517 81 aa12.51□□□□□ -0.41
SPCS3-204ENST00000513139 PRICKLE4Q2TBC4 344 aa12.51□□□□□ -0.41
SPCS3-204ENST00000513139 TIFABQ6ZNK6 161 aa12.51□□□□□ -0.41
SPCS3-204ENST00000513139 FAM214BQ7L5A3 538 aa12.51□□□□□ -0.41
SPCS3-204ENST00000513139 TBC1D1Q86TI0 1168 aaPredicted RBP12.51□□□□□ -0.41
SPCS3-204ENST00000513139 PLPPR2Q96GM1 343 aa12.51□□□□□ -0.41
SPCS3-204ENST00000513139 COL21A1Q96P44 957 aa12.51□□□□□ -0.41
SPCS3-204ENST00000513139 ZIM3Q96PE6 472 aa12.51□□□□□ -0.41
SPCS3-204ENST00000513139 ITPAQ9BY32 194 aa12.51□□□□□ -0.41
SPCS3-204ENST00000513139 OR10A4Q9H209 315 aa12.51□□□□□ -0.41
SPCS3-204ENST00000513139 PLSCR4Q9NRQ2 329 aa12.51□□□□□ -0.41
SPCS3-204ENST00000513139 NUDT4Q9NZJ9 180 aa12.51□□□□□ -0.41
SPCS3-204ENST00000513139 ZNF639Q9UID6 485 aa12.51□□□□□ -0.41
SPCS3-204ENST00000513139 FOXE1O00358 373 aaPredicted RBP12.5□□□□□ -0.41
SPCS3-204ENST00000513139 UGDHO60701 494 aa12.5□□□□□ -0.41
SPCS3-204ENST00000513139 SEMA3DO95025 777 aa12.5□□□□□ -0.41
SPCS3-204ENST00000513139 ATP1B1P05026 303 aa12.5□□□□□ -0.41
SPCS3-204ENST00000513139 THBS1P07996 1170 aa12.5□□□□□ -0.41
SPCS3-204ENST00000513139 LTA4HP09960 611 aaKnown RBP12.5□□□□□ -0.41
SPCS3-204ENST00000513139 DSCR4P56555 118 aaPredicted RBP12.5□□□□□ -0.41
SPCS3-204ENST00000513139 CLDN15P56746 228 aa12.5□□□□□ -0.41
SPCS3-204ENST00000513139 MGAT2Q10469 447 aa12.5□□□□□ -0.41
SPCS3-204ENST00000513139 UBQLNLQ8IYU4 475 aa12.5□□□□□ -0.41
SPCS3-204ENST00000513139 STAG3L4Q8TBR4 150 aa12.5□□□□□ -0.41
SPCS3-204ENST00000513139 RNF138Q8WVD3 245 aa12.5□□□□□ -0.41
SPCS3-204ENST00000513139 AKAP1Q92667 903 aaKnown RBP eCLIP12.5□□□□□ -0.41
SPCS3-204ENST00000513139 MTBPQ96DY7 904 aa12.5□□□□□ -0.41
SPCS3-204ENST00000513139 SLC35A4Q96G79 324 aa12.5□□□□□ -0.41
SPCS3-204ENST00000513139 GPR78Q96P69 363 aa12.5□□□□□ -0.41
SPCS3-204ENST00000513139 TMEM109Q9BVC6 243 aa12.5□□□□□ -0.41
SPCS3-204ENST00000513139 PINK1Q9BXM7 581 aa12.5□□□□□ -0.41
SPCS3-204ENST00000513139 ROPN1BQ9BZX4 212 aaPredicted RBP12.5□□□□□ -0.41
SPCS3-204ENST00000513139 AMBRA1Q9C0C7 1298 aa12.5□□□□□ -0.41
SPCS3-204ENST00000513139 SLCO5A1Q9H2Y9 848 aa12.5□□□□□ -0.41
SPCS3-204ENST00000513139 ALG9Q9H6U8 611 aa12.5□□□□□ -0.41
SPCS3-204ENST00000513139 PPCSQ9HAB8 311 aa12.5□□□□□ -0.41
SPCS3-204ENST00000513139 ROPN1Q9HAT0 212 aaPredicted RBP12.5□□□□□ -0.41
SPCS3-204ENST00000513139 FANCFQ9NPI8 374 aa12.5□□□□□ -0.41
SPCS3-204ENST00000513139 MAT2BQ9NZL9 334 aa12.5□□□□□ -0.41
SPCS3-204ENST00000513139 EHD3Q9NZN3 535 aa12.5□□□□□ -0.41
SPCS3-204ENST00000513139 BCAP29Q9UHQ4 241 aa12.5□□□□□ -0.41
SPCS3-204ENST00000513139 FREM1Q5H8C1 2179 aa12.5□□□□□ -0.41
SPCS3-204ENST00000513139 PLCE1Q9P212 2302 aa12.5□□□□□ -0.41
SPCS3-204ENST00000513139 GOLGA6L10A6NI86 522 aa12.49□□□□□ -0.41
SPCS3-204ENST00000513139 KLHL2O95198 593 aa12.49□□□□□ -0.41
SPCS3-204ENST00000513139 DANCRP0C864 163 aa12.49□□□□□ -0.41
SPCS3-204ENST00000513139 FCGR2AP12318 317 aa12.49□□□□□ -0.41
SPCS3-204ENST00000513139 GRK2P25098 689 aa12.49□□□□□ -0.41
SPCS3-204ENST00000513139 ACVR1BP36896 505 aa12.49□□□□□ -0.41
SPCS3-204ENST00000513139 PSPHP78330 225 aa12.49□□□□□ -0.41
SPCS3-204ENST00000513139 RASA2Q15283 850 aa12.49□□□□□ -0.41
SPCS3-204ENST00000513139 KRTAP24-1Q3LI83 254 aa12.49□□□□□ -0.41
SPCS3-204ENST00000513139 KRT71Q3SY84 523 aa12.49□□□□□ -0.41
SPCS3-204ENST00000513139 CEP85LQ5SZL2 805 aa12.49□□□□□ -0.41
SPCS3-204ENST00000513139 STAC2Q6ZMT1 411 aa12.49□□□□□ -0.41
SPCS3-204ENST00000513139 ISCA2Q86U28 154 aa12.49□□□□□ -0.41
SPCS3-204ENST00000513139 MYLK4Q86YV6 388 aaPredicted RBP12.49□□□□□ -0.41
SPCS3-204ENST00000513139 FNDC9Q8TBE3 224 aa12.49□□□□□ -0.41
SPCS3-204ENST00000513139 EXT2Q93063 718 aa12.49□□□□□ -0.41
SPCS3-204ENST00000513139 BRINP2Q9C0B6 783 aa12.49□□□□□ -0.41
SPCS3-204ENST00000513139 NMRAL1Q9HBL8 299 aa12.49□□□□□ -0.41
SPCS3-204ENST00000513139 TMEM160Q9NX00 188 aa12.49□□□□□ -0.41
SPCS3-204ENST00000513139 PRODH2Q9UF12 536 aa12.49□□□□□ -0.41
SPCS3-204ENST00000513139 GPR55Q9Y2T6 319 aaPredicted RBP12.49□□□□□ -0.41
SPCS3-204ENST00000513139 MALRD1Q5VYJ5 2156 aa12.49□□□□□ -0.41
SPCS3-204ENST00000513139 UQCRHLA0A096LP55 91 aa12.48□□□□□ -0.41
SPCS3-204ENST00000513139 REM1O75628 298 aa12.48□□□□□ -0.41
SPCS3-204ENST00000513139 GBAP04062 536 aa12.48□□□□□ -0.41
SPCS3-204ENST00000513139 IL11P20809 199 aa12.48□□□□□ -0.41
SPCS3-204ENST00000513139 EMDP50402 254 aa12.48□□□□□ -0.41
SPCS3-204ENST00000513139 NEK2P51955 445 aa12.48□□□□□ -0.41
SPCS3-204ENST00000513139 SUCLG1P53597 346 aaKnown RBP12.48□□□□□ -0.41
SPCS3-204ENST00000513139 GAS1P54826 345 aa12.48□□□□□ -0.41
SPCS3-204ENST00000513139 EFR3AQ14156 821 aa12.48□□□□□ -0.41
SPCS3-204ENST00000513139 CASP8Q14790 479 aa12.48□□□□□ -0.41
SPCS3-204ENST00000513139 EXOSC7Q15024 291 aaKnown RBP12.48□□□□□ -0.41
SPCS3-204ENST00000513139 PON3Q15166 354 aa12.48□□□□□ -0.41
SPCS3-204ENST00000513139 FAM83EQ2M2I3 478 aa12.48□□□□□ -0.41
SPCS3-204ENST00000513139 EXOC3L2Q2M3D2 409 aa12.48□□□□□ -0.41
SPCS3-204ENST00000513139 C6orf52Q5T4I8 152 aa12.48□□□□□ -0.41
SPCS3-204ENST00000513139 OR5M10Q6IEU7 315 aa12.48□□□□□ -0.41
SPCS3-204ENST00000513139 FAM111BQ6SJ93 734 aa12.48□□□□□ -0.41
SPCS3-204ENST00000513139 DNAJC14Q6Y2X3 702 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms