RNA–Protein interactions for RNA: ENST00000512878.1

RHOBTB3-213, Transcript of Rho related BTB domain containing 3, human

TSL 2

Gene RHOBTB3, Length 483 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RHOBTB3-213	ENST00000512878	TNFAIP8L3	Q5GJ75	292 aa		11.64	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	PLCZ1	Q86YW0	608 aa		11.64	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	DDIAS	Q8IXT1	998 aa		11.64	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	DMRTC2	Q8IXT2	367 aa	Predicted RBP	11.64	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	PM20D2	Q8IYS1	436 aa		11.64	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	TNIP2	Q8NFZ5	429 aa		11.64	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	AGR3	Q8TD06	166 aa		11.64	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	ABTB1	Q969K4	478 aa	Predicted RBP	11.64	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	GIMAP5	Q96F15	307 aa		11.64	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	LMF2	Q9BU23	707 aa	Known RBP	11.64	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	RTN4R	Q9BZR6	473 aa		11.64	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	DDX18	Q9NVP1	670 aa	Known RBP	11.64	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	NTM	Q9P121	344 aa		11.64	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	PRR14L	Q5THK1	2151 aa		11.64	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	PDPK1	O15530	556 aa		11.63	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	FADS1	O60427	444 aa		11.63	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	ZIC3	O60481	467 aa		11.63	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	GRK2	P25098	689 aa		11.63	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	EVI2B	P34910	448 aa		11.63	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	NSUN5P2	Q63ZY6	315 aa		11.63	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	OR5M10	Q6IEU7	315 aa		11.63	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	PLXDC2	Q6UX71	529 aa		11.63	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	ADGRE4P	Q86SQ3	457 aa		11.63	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	LACC1	Q8IV20	430 aa		11.63	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	FADS6	Q8N9I5	356 aa		11.63	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	RELL2	Q8NC24	303 aa	Predicted RBP	11.63	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	PPCDC	Q96CD2	204 aa		11.63	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	PKNOX2	Q96KN3	472 aa		11.63	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	G6PC3	Q9BUM1	346 aa		11.63	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	EML4	Q9HC35	981 aa	Known RBP	11.63	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	ITGB1BP2	Q9UKP3	347 aa		11.63	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	CBLC	Q9ULV8	474 aa		11.63	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	OR10H1	Q9Y4A9	318 aa		11.63	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	GXYLT2	A0PJZ3	443 aa		11.62	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	CD8B2	A6NJW9	211 aa		11.62	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	FAM47E-STBD1	D6RA91	191 aa		11.62	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	ITM2A	O43736	263 aa		11.62	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	IL33	O95760	270 aa		11.62	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	ACTL6A	O96019	429 aa		11.62	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	IGKV1D-16	P01601	117 aa		11.62	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	CPN1	P15169	458 aa		11.62	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	SSTR2	P30874	369 aa		11.62	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	SRD5A2	P31213	254 aa		11.62	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	KRT20	P35900	424 aa		11.62	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	ASMT	P46597	345 aa		11.62	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	SERPINB4	P48594	390 aa		11.62	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	ZNF136	P52737	540 aa		11.62	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	SLC25A35	Q3KQZ1	300 aa		11.62	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	KRT71	Q3SY84	523 aa		11.62	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	EXOSC6	Q5RKV6	272 aa	Known RBP	11.62	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	EXOC3L1	Q86VI1	746 aa		11.62	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	HOMEZ	Q8IX15	550 aa		11.62	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	NUDT8	Q8WV74	236 aa		11.62	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	NRGN	Q92686	78 aa		11.62	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	MTERF3	Q96E29	417 aa		11.62	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	ZBED6CL	Q96FA7	236 aa	Predicted RBP	11.62	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	C20orf27	Q9GZN8	174 aa		11.62	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	ZNF395	Q9H8N7	513 aa	Predicted RBP	11.62	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	SIRT3	Q9NTG7	399 aa	Predicted RBP	11.62	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	ACSS1	Q9NUB1	689 aa	Predicted RBP	11.62	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	TAS2R10	Q9NYW0	307 aa		11.62	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	SH3BP4	Q9P0V3	963 aa		11.62	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	ATP6V1H	Q9UI12	483 aa		11.62	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	CAMK2A	Q9UQM7	478 aa		11.62	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	MRPS18C	Q9Y3D5	142 aa	Known RBP	11.62	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	ZFHX3	Q15911	3703 aa		11.61	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	MBD3L4	A6NDZ8	208 aa	Predicted RBP	11.61	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	MBD3L3	A6NE82	208 aa	Predicted RBP	11.61	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	MBD3L5	A6NJ08	208 aa	Predicted RBP	11.61	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	HSPB2	A8KAH6	182 aa		11.61	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	ESPN	B1AK53	854 aa		11.61	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	SCAMP2	O15127	329 aa	Known RBP	11.61	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	RGS16	O15492	202 aa	Predicted RBP	11.61	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	PEX11A	O75192	247 aa		11.61	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	SKAP2	O75563	359 aa	Predicted RBP	11.61	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	LYPLA1	O75608	230 aa	Predicted RBP	11.61	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	NKX2-2	O95096	273 aa		11.61	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	DHRS4L1	P0CG22	281 aa		11.61	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	EFNA1	P20827	205 aa	Predicted RBP	11.61	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	LHX2	P50458	406 aa		11.61	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	MANF	P55145	182 aa	Known RBP	11.61	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	B3GALT5-AS1	P59052	145 aa		11.61	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	MPP2	Q14168	576 aa		11.61	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	PTGR1	Q14914	329 aa		11.61	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	MLC1	Q15049	377 aa		11.61	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	HSPB2	Q16082	182 aa		11.61	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	DECR1	Q16698	335 aa		11.61	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	C6orf136	Q5SQH8	315 aa		11.61	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	APOOL	Q6UXV4	268 aa		11.61	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	IFNE	Q86WN2	208 aa		11.61	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	TRIM42	Q8IWZ5	723 aa		11.61	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	OR2M3	Q8NG83	312 aa		11.61	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	OR7A2P	Q8NGA2	310 aa		11.61	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	OR14L1P	Q8NHC6	308 aa		11.61	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	11.61	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	ZPLD1	Q8TCW7	415 aa		11.61	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	PIK3R3	Q92569	461 aa		11.61	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	PPP3R2	Q96LZ3	170 aa		11.61	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	SH3GL2	Q99962	352 aa		11.61	□□□□□ -0.55
RHOBTB3-213	ENST00000512878	TUBA1C	Q9BQE3	449 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms