RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 ESRRBO95718 433 aa11.37□□□□□ -0.59
VEGFA-216ENST00000512683 IFI6P09912 130 aa11.37□□□□□ -0.59
VEGFA-216ENST00000512683 CD8BP10966 210 aa11.37□□□□□ -0.59
VEGFA-216ENST00000512683 PCSK2P16519 638 aa11.37□□□□□ -0.59
VEGFA-216ENST00000512683 CRYGSP22914 178 aa11.37□□□□□ -0.59
VEGFA-216ENST00000512683 GRK2P25098 689 aa11.37□□□□□ -0.59
VEGFA-216ENST00000512683 IL12BP29460 328 aa11.37□□□□□ -0.59
VEGFA-216ENST00000512683 CD79BP40259 229 aa11.37□□□□□ -0.59
VEGFA-216ENST00000512683 STARP49675 285 aa11.37□□□□□ -0.59
VEGFA-216ENST00000512683 CLK3P49761 638 aaKnown RBP11.37□□□□□ -0.59
VEGFA-216ENST00000512683 GAS1P54826 345 aa11.37□□□□□ -0.59
VEGFA-216ENST00000512683 LCP2Q13094 533 aa11.37□□□□□ -0.59
VEGFA-216ENST00000512683 NNATQ16517 81 aa11.37□□□□□ -0.59
VEGFA-216ENST00000512683 ACKR1Q16570 336 aa11.37□□□□□ -0.59
VEGFA-216ENST00000512683 SPIN4Q56A73 249 aa11.37□□□□□ -0.59
VEGFA-216ENST00000512683 FAM180BQ6P0A1 224 aa11.37□□□□□ -0.59
VEGFA-216ENST00000512683 C20orf204Q6ZNR8 217 aa11.37□□□□□ -0.59
VEGFA-216ENST00000512683 LARP4Q71RC2 724 aaKnown RBP eCLIP11.37□□□□□ -0.591e-25■□□□□ 10.3
VEGFA-216ENST00000512683 SLC22A9Q8IVM8 553 aa11.37□□□□□ -0.59
VEGFA-216ENST00000512683 EIF1ADQ8N9N8 165 aaKnown RBP11.37□□□□□ -0.59
VEGFA-216ENST00000512683 METTL6Q8TCB7 284 aa11.37□□□□□ -0.59
VEGFA-216ENST00000512683 ARSGQ96EG1 525 aa11.37□□□□□ -0.59
VEGFA-216ENST00000512683 KCNA7Q96RP8 456 aa11.37□□□□□ -0.59
VEGFA-216ENST00000512683 ACPTQ9BZG2 426 aa11.37□□□□□ -0.59
VEGFA-216ENST00000512683 GSTO2Q9H4Y5 243 aa11.37□□□□□ -0.59
VEGFA-216ENST00000512683 PTGES2Q9H7Z7 377 aa11.37□□□□□ -0.59
VEGFA-216ENST00000512683 FANCFQ9NPI8 374 aa11.37□□□□□ -0.59
VEGFA-216ENST00000512683 SLC35C2Q9NQQ7 365 aa11.37□□□□□ -0.59
VEGFA-216ENST00000512683 DCDC2Q9UHG0 476 aa11.37□□□□□ -0.59
VEGFA-216ENST00000512683 DKKL1Q9UK85 242 aa11.37□□□□□ -0.59
VEGFA-216ENST00000512683 FBXL2Q9UKC9 423 aa11.37□□□□□ -0.59
VEGFA-216ENST00000512683 GRID1Q9ULK0 1009 aa11.37□□□□□ -0.59
VEGFA-216ENST00000512683 ABCG2Q9UNQ0 655 aa11.37□□□□□ -0.59
VEGFA-216ENST00000512683 KIAA1549Q9HCM3 1950 aa11.37□□□□□ -0.59
VEGFA-216ENST00000512683 A0A087WV62 115 aa11.36□□□□□ -0.59
VEGFA-216ENST00000512683 SLC22A20A6NK97 555 aa11.36□□□□□ -0.59
VEGFA-216ENST00000512683 C16orf97H3BN30 126 aa11.36□□□□□ -0.59
VEGFA-216ENST00000512683 H3BQF6 201 aa11.36□□□□□ -0.59
VEGFA-216ENST00000512683 COQ9O75208 318 aa11.36□□□□□ -0.59
VEGFA-216ENST00000512683 TGM6O95932 706 aa11.36□□□□□ -0.59
VEGFA-216ENST00000512683 PPP3CBP16298 524 aa11.36□□□□□ -0.59
VEGFA-216ENST00000512683 ALDH9A1P49189 494 aa11.36□□□□□ -0.59
VEGFA-216ENST00000512683 PSMD4P55036 377 aaKnown RBP11.36□□□□□ -0.59
VEGFA-216ENST00000512683 PKNOX1P55347 436 aa11.36□□□□□ -0.59
VEGFA-216ENST00000512683 B3GALT5-AS1P59052 145 aa11.36□□□□□ -0.59
VEGFA-216ENST00000512683 FAM27E3Q08E93 113 aa11.36□□□□□ -0.59
VEGFA-216ENST00000512683 DESI1Q6ICB0 168 aa11.36□□□□□ -0.59
VEGFA-216ENST00000512683 KRTAP1-3Q8IUG1 177 aa11.36□□□□□ -0.59
VEGFA-216ENST00000512683 FADS6Q8N9I5 356 aa11.36□□□□□ -0.59
VEGFA-216ENST00000512683 OR4K17Q8NGC6 315 aa11.36□□□□□ -0.59
VEGFA-216ENST00000512683 RDH11Q8TC12 318 aa11.36□□□□□ -0.59
VEGFA-216ENST00000512683 APIPQ96GX9 242 aa11.36□□□□□ -0.59
VEGFA-216ENST00000512683 WFIKKN1Q96NZ8 548 aa11.36□□□□□ -0.59
VEGFA-216ENST00000512683 PIGQQ9BRB3 760 aa11.36□□□□□ -0.59
VEGFA-216ENST00000512683 ZNF395Q9H8N7 513 aaPredicted RBP11.36□□□□□ -0.59
VEGFA-216ENST00000512683 L2HGDHQ9H9P8 463 aa11.36□□□□□ -0.59
VEGFA-216ENST00000512683 PFDN4Q9NQP4 134 aa11.36□□□□□ -0.59
VEGFA-216ENST00000512683 PAQR5Q9NXK6 330 aaPredicted RBP11.36□□□□□ -0.59
VEGFA-216ENST00000512683 TAS2R7Q9NYW3 318 aa11.36□□□□□ -0.59
VEGFA-216ENST00000512683 TIMM22Q9Y584 194 aa11.36□□□□□ -0.59
VEGFA-216ENST00000512683 PCNX3Q9H6A9 2034 aa11.36□□□□□ -0.59
VEGFA-216ENST00000512683 MED12Q93074 2177 aa11.35□□□□□ -0.59
VEGFA-216ENST00000512683 PROCP04070 461 aa11.35□□□□□ -0.59
VEGFA-216ENST00000512683 ENO1P06733 434 aaKnown RBP11.35□□□□□ -0.59
VEGFA-216ENST00000512683 FCGR2AP12318 317 aa11.35□□□□□ -0.59
VEGFA-216ENST00000512683 IL11P20809 199 aa11.35□□□□□ -0.59
VEGFA-216ENST00000512683 HMOX2P30519 316 aa11.35□□□□□ -0.59
VEGFA-216ENST00000512683 KIR2DL2P43627 348 aaPredicted RBP11.35□□□□□ -0.59
VEGFA-216ENST00000512683 FOXA1P55317 472 aa11.35□□□□□ -0.59
VEGFA-216ENST00000512683 RPS3AP61247 264 aaKnown RBP11.35□□□□□ -0.59
VEGFA-216ENST00000512683 NAA20P61599 178 aa11.35□□□□□ -0.59
VEGFA-216ENST00000512683 MRPS35P82673 323 aaKnown RBP11.35□□□□□ -0.59
VEGFA-216ENST00000512683 ACSM2AQ08AH3 577 aa11.35□□□□□ -0.59
VEGFA-216ENST00000512683 LTB4RQ15722 352 aa11.35□□□□□ -0.59
VEGFA-216ENST00000512683 ACSM2BQ68CK6 577 aa11.35□□□□□ -0.59
VEGFA-216ENST00000512683 ZNF474Q6S9Z5 364 aaPredicted RBP11.35□□□□□ -0.59
VEGFA-216ENST00000512683 ZYG11AQ6WRX3 759 aa11.35□□□□□ -0.59
VEGFA-216ENST00000512683 TDRPQ86YL5 185 aa11.35□□□□□ -0.59
VEGFA-216ENST00000512683 HOMEZQ8IX15 550 aa11.35□□□□□ -0.59
VEGFA-216ENST00000512683 FAM9CQ8IZT9 166 aa11.35□□□□□ -0.59
VEGFA-216ENST00000512683 GCNT2Q8N0V5 402 aa11.35□□□□□ -0.59
VEGFA-216ENST00000512683 FAM76AQ8TAV0 307 aa11.35□□□□□ -0.59
VEGFA-216ENST00000512683 PGM2Q96G03 612 aa11.35□□□□□ -0.59
VEGFA-216ENST00000512683 METTL2AQ96IZ6 378 aaKnown RBP11.35□□□□□ -0.59
VEGFA-216ENST00000512683 COX4I2Q96KJ9 171 aa11.35□□□□□ -0.59
VEGFA-216ENST00000512683 MED18Q9BUE0 208 aa11.35□□□□□ -0.59
VEGFA-216ENST00000512683 C12orf65Q9H3J6 166 aaKnown RBP11.35□□□□□ -0.59
VEGFA-216ENST00000512683 RNF122Q9H9V4 155 aa11.35□□□□□ -0.59
VEGFA-216ENST00000512683 FOLH1BQ9HBA9 442 aa11.35□□□□□ -0.59
VEGFA-216ENST00000512683 C3orf14Q9HBI5 128 aa11.35□□□□□ -0.59
VEGFA-216ENST00000512683 TNFRSF12AQ9NP84 129 aa11.35□□□□□ -0.59
VEGFA-216ENST00000512683 OR10H1Q9Y4A9 318 aa11.35□□□□□ -0.59
VEGFA-216ENST00000512683 AP4B1Q9Y6B7 739 aa11.35□□□□□ -0.59
VEGFA-216ENST00000512683 GNG14A0A1W2PPG7 69 aa11.34□□□□□ -0.59
VEGFA-216ENST00000512683 A0A1W2PPR1 153 aa11.34□□□□□ -0.59
VEGFA-216ENST00000512683 DEFB108AA8MXU0 73 aa11.34□□□□□ -0.59
VEGFA-216ENST00000512683 PCDH7O60245 1069 aa11.34□□□□□ -0.59
VEGFA-216ENST00000512683 FADS1O60427 444 aa11.34□□□□□ -0.59
VEGFA-216ENST00000512683 PLIN3O60664 434 aa11.34□□□□□ -0.59
VEGFA-216ENST00000512683 GLRA3O75311 464 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms