RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 ZNF574Q6ZN55 896 aaPredicted RBP8.47□□□□□ -1.05
VCAN-208ENST00000512590 AAED1Q7RTV5 226 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 NOXA1Q86UR1 476 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 DCAF4L2Q8NA75 395 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 DNAJB8Q8NHS0 232 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 TNFRSF25Q93038 417 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 FOXRED1Q96CU9 486 aaPredicted RBP8.47□□□□□ -1.05
VCAN-208ENST00000512590 FRG2BQ96QU4 278 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 MEPEQ9NQ76 525 aaPredicted RBP8.47□□□□□ -1.05
VCAN-208ENST00000512590 A0A0U1RQF3 1178 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 K7EQS6 105 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 RAB27BO00194 218 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 TUSC2O75896 110 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 GSRP00390 522 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 GBAP04062 536 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 SLC10A3P09131 477 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 OR8U9P0C7N5 309 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 HOXD12P35452 270 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 GABRB2P47870 512 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 KCNQ1P51787 676 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 DAOAP59103 153 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 RAB11AP62491 216 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 GRB2P62993 217 aaKnown RBP8.47□□□□□ -1.05
VCAN-208ENST00000512590 MBTPS1Q14703 1052 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 GPRC6AQ5T6X5 926 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 ASRGL1Q7L266 308 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 DEFB124Q8NES8 71 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 RHEBL1Q8TAI7 183 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 RNF128Q8TEB7 428 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 TOMM40LQ969M1 308 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 ZUFSPQ96AP4 578 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 KCTD7Q96MP8 289 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 METTL9Q9H1A3 318 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 RETREG1Q9H6L5 497 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 UBE2ZQ9H832 354 aaPredicted RBP8.47□□□□□ -1.05
VCAN-208ENST00000512590 MINDY3Q9H8M7 445 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 PLSCR3Q9NRY6 295 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 C1orf226A1L170 272 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 SHOX2O60902 331 aaPredicted RBP8.47□□□□□ -1.05
VCAN-208ENST00000512590 CILPO75339 1184 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 ADRB3P13945 408 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 ROR2Q01974 943 aaKnown RBP8.47□□□□□ -1.05
VCAN-208ENST00000512590 ZNF169Q14929 603 aaPredicted RBP8.47□□□□□ -1.05
VCAN-208ENST00000512590 GGNBP1Q5YKI7 109 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 PQLC1Q8N2U9 271 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 ZFPM2Q8WW38 1151 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 MAF1Q9H063 256 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 FBXW11Q9UKB1 542 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 PCDHA9Q9Y5H5 950 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 A0A1W2PP18 115 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 UNCXA6NJT0 531 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 AIPO00170 330 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 KDELR3O43731 214 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 NXPH2O95156 264 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 CAPN3P20807 821 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 HOXA10P31260 410 aaPredicted RBP8.47□□□□□ -1.05
VCAN-208ENST00000512590 XCR1P46094 333 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 SUOXP51687 545 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 GTF2BQ00403 316 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 LRRC18Q8N456 261 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 BPIFB2Q8N4F0 458 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 WDR20Q8TBZ3 569 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 ESAMQ96AP7 390 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 UHRF2Q96PU4 802 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 AKTIPQ9H8T0 292 aa8.47□□□□□ -1.05
VCAN-208ENST00000512590 INO80Q9ULG1 1556 aaPredicted RBP8.46□□□□□ -1.05
VCAN-208ENST00000512590 PCP4L1A6NKN8 68 aa8.46□□□□□ -1.05
VCAN-208ENST00000512590 SELEP16581 610 aa8.46□□□□□ -1.05
VCAN-208ENST00000512590 AHRP35869 848 aa8.46□□□□□ -1.05
VCAN-208ENST00000512590 HTR3AP46098 478 aa8.46□□□□□ -1.05
VCAN-208ENST00000512590 ZNF648Q5T619 568 aaPredicted RBP8.46□□□□□ -1.05
VCAN-208ENST00000512590 LRRC38Q5VT99 294 aa8.46□□□□□ -1.05
VCAN-208ENST00000512590 TMEM107Q6UX40 140 aa8.46□□□□□ -1.05
VCAN-208ENST00000512590 SHFQ7M4L6 423 aa8.46□□□□□ -1.05
VCAN-208ENST00000512590 AKAP14Q86UN6 197 aa8.46□□□□□ -1.05
VCAN-208ENST00000512590 SERPINA12Q8IW75 414 aa8.46□□□□□ -1.05
VCAN-208ENST00000512590 SVOPLQ8N434 492 aa8.46□□□□□ -1.05
VCAN-208ENST00000512590 TMEM230Q96A57 120 aa8.46□□□□□ -1.05
VCAN-208ENST00000512590 MRIQ9BWK5 157 aa8.46□□□□□ -1.05
VCAN-208ENST00000512590 TFB2MQ9H5Q4 396 aaKnown RBP8.46□□□□□ -1.05
VCAN-208ENST00000512590 BCO1Q9HAY6 547 aa8.46□□□□□ -1.05
VCAN-208ENST00000512590 KCMF1Q9P0J7 381 aa8.46□□□□□ -1.05
VCAN-208ENST00000512590 FBXL17Q9UF56 701 aa8.46□□□□□ -1.05
VCAN-208ENST00000512590 TMED5Q9Y3A6 229 aa8.46□□□□□ -1.05
VCAN-208ENST00000512590 SPINT2O43291 252 aa8.46□□□□□ -1.05
VCAN-208ENST00000512590 PLRG1O43660 514 aaKnown RBP8.46□□□□□ -1.05
VCAN-208ENST00000512590 PEX10O60683 326 aa8.46□□□□□ -1.05
VCAN-208ENST00000512590 RGS9O75916 674 aaPredicted RBP8.46□□□□□ -1.05
VCAN-208ENST00000512590 UBCP0CG48 685 aaKnown RBP8.46□□□□□ -1.05
VCAN-208ENST00000512590 SPP1P10451 314 aa8.46□□□□□ -1.05
VCAN-208ENST00000512590 ENGP17813 658 aa8.46□□□□□ -1.05
VCAN-208ENST00000512590 SERPINF1P36955 418 aa8.46□□□□□ -1.05
VCAN-208ENST00000512590 GRIA1P42261 906 aa8.46□□□□□ -1.05
VCAN-208ENST00000512590 CAMLGP49069 296 aa8.46□□□□□ -1.05
VCAN-208ENST00000512590 CARD18P57730 90 aa8.46□□□□□ -1.05
VCAN-208ENST00000512590 RAB15P59190 212 aa8.46□□□□□ -1.05
VCAN-208ENST00000512590 TAS2R20P59543 309 aa8.46□□□□□ -1.05
VCAN-208ENST00000512590 MRPS21P82921 87 aaKnown RBP8.46□□□□□ -1.05
VCAN-208ENST00000512590 UPP1Q16831 310 aa8.46□□□□□ -1.05
VCAN-208ENST00000512590 CMC1Q7Z7K0 106 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms