RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 MAPRE2Q15555 327 aa6.87□□□□□ -1.31
NR1I3-231ENST00000512340 NNATQ16517 81 aa6.87□□□□□ -1.31
NR1I3-231ENST00000512340 SLC9B1Q4ZJI4 515 aa6.87□□□□□ -1.31
NR1I3-231ENST00000512340 FHL5Q5TD97 284 aa6.87□□□□□ -1.31
NR1I3-231ENST00000512340 ZNF468Q5VIY5 522 aaPredicted RBP6.87□□□□□ -1.31
NR1I3-231ENST00000512340 CES4AQ5XG92 561 aa6.87□□□□□ -1.31
NR1I3-231ENST00000512340 OR4F3Q6IEY1 312 aa6.87□□□□□ -1.31
NR1I3-231ENST00000512340 CDC73Q6P1J9 531 aa6.87□□□□□ -1.31
NR1I3-231ENST00000512340 ARHGAP11AQ6P4F7 1023 aa6.87□□□□□ -1.31
NR1I3-231ENST00000512340 TMEM81Q6P7N7 255 aa6.87□□□□□ -1.31
NR1I3-231ENST00000512340 ANGPTL8Q6UXH0 198 aa6.87□□□□□ -1.31
NR1I3-231ENST00000512340 C16orf62Q7Z3J2 963 aa6.87□□□□□ -1.31
NR1I3-231ENST00000512340 MDGA2Q7Z553 956 aa6.87□□□□□ -1.31
NR1I3-231ENST00000512340 ZGRF1Q86YA3 2104 aa6.87□□□□□ -1.31
NR1I3-231ENST00000512340 MISPQ8IVT2 679 aa6.87□□□□□ -1.31
NR1I3-231ENST00000512340 FAM109AQ8N4B1 249 aa6.87□□□□□ -1.31
NR1I3-231ENST00000512340 KRTCAP2Q8N6L1 136 aa6.87□□□□□ -1.31
NR1I3-231ENST00000512340 OR10G3Q8NGC4 313 aa6.87□□□□□ -1.31
NR1I3-231ENST00000512340 OR1J4Q8NGS1 313 aa6.87□□□□□ -1.31
NR1I3-231ENST00000512340 PSMA8Q8TAA3 256 aa6.87□□□□□ -1.31
NR1I3-231ENST00000512340 FAM81AQ8TBF8 368 aa6.87□□□□□ -1.31
NR1I3-231ENST00000512340 SPPL2AQ8TCT8 520 aa6.87□□□□□ -1.31
NR1I3-231ENST00000512340 TMBIM1Q969X1 311 aa6.87□□□□□ -1.31
NR1I3-231ENST00000512340 SLC35A4Q96G79 324 aa6.87□□□□□ -1.31
NR1I3-231ENST00000512340 SLC35G5Q96KT7 338 aa6.87□□□□□ -1.31
NR1I3-231ENST00000512340 FRMD6Q96NE9 622 aa6.87□□□□□ -1.31
NR1I3-231ENST00000512340 ADOQ96SZ5 270 aa6.87□□□□□ -1.31
NR1I3-231ENST00000512340 LMF2Q9BU23 707 aaKnown RBP6.87□□□□□ -1.31
NR1I3-231ENST00000512340 BTBD2Q9BX70 525 aa6.87□□□□□ -1.31
NR1I3-231ENST00000512340 OSBPL11Q9BXB4 747 aa6.87□□□□□ -1.31
NR1I3-231ENST00000512340 TBL1XR1Q9BZK7 514 aa6.87□□□□□ -1.31
NR1I3-231ENST00000512340 TRIM4Q9C037 500 aa6.87□□□□□ -1.31
NR1I3-231ENST00000512340 PIGUQ9H490 435 aa6.87□□□□□ -1.31
NR1I3-231ENST00000512340 NPHS2Q9NP85 383 aa6.87□□□□□ -1.31
NR1I3-231ENST00000512340 BATF3Q9NR55 127 aa6.87□□□□□ -1.31
NR1I3-231ENST00000512340 SDR39U1Q9NRG7 319 aaPredicted RBP6.87□□□□□ -1.31
NR1I3-231ENST00000512340 NPIPA1Q9UND3 350 aa6.87□□□□□ -1.31
NR1I3-231ENST00000512340 CORO2BQ9UQ03 480 aa6.87□□□□□ -1.31
NR1I3-231ENST00000512340 EXO1Q9UQ84 846 aaKnown RBP6.87□□□□□ -1.31
NR1I3-231ENST00000512340 GPR45Q9Y5Y3 372 aa6.87□□□□□ -1.31
NR1I3-231ENST00000512340 NUP214P35658 2090 aaPredicted RBP6.87□□□□□ -1.31
NR1I3-231ENST00000512340 PCSK5Q92824 1860 aa6.87□□□□□ -1.31
NR1I3-231ENST00000512340 SPTBN1Q01082 2364 aaKnown RBP6.87□□□□□ -1.31
NR1I3-231ENST00000512340 USP9YO00507 2555 aaPredicted RBP6.86□□□□□ -1.31
NR1I3-231ENST00000512340 RNF103-CHMP3A0A140T963 221 aa6.86□□□□□ -1.31
NR1I3-231ENST00000512340 OR14I1A6ND48 311 aa6.86□□□□□ -1.31
NR1I3-231ENST00000512340 CCDC154A6NI56 674 aa6.86□□□□□ -1.31
NR1I3-231ENST00000512340 SCDO00767 359 aa6.86□□□□□ -1.31
NR1I3-231ENST00000512340 BCKDKO14874 412 aa6.86□□□□□ -1.31
NR1I3-231ENST00000512340 ASNA1O43681 348 aa6.86□□□□□ -1.31
NR1I3-231ENST00000512340 AHCYL1O43865 530 aa6.86□□□□□ -1.31
NR1I3-231ENST00000512340 CDC40O60508 579 aaKnown RBP eCLIP6.86□□□□□ -1.31
NR1I3-231ENST00000512340 HCN1O60741 890 aa6.86□□□□□ -1.31
NR1I3-231ENST00000512340 CBR3O75828 277 aa6.86□□□□□ -1.31
NR1I3-231ENST00000512340 NKX2-2O95096 273 aa6.86□□□□□ -1.31
NR1I3-231ENST00000512340 UNC5CO95185 931 aa6.86□□□□□ -1.31
NR1I3-231ENST00000512340 IL33O95760 270 aa6.86□□□□□ -1.31
NR1I3-231ENST00000512340 CLPSP04118 112 aa6.86□□□□□ -1.31
NR1I3-231ENST00000512340 HMGN2P05204 90 aaKnown RBP6.86□□□□□ -1.31
NR1I3-231ENST00000512340 CT45A8P0DMV1 189 aa6.86□□□□□ -1.31
NR1I3-231ENST00000512340 CT45A9P0DMV2 189 aa6.86□□□□□ -1.31
NR1I3-231ENST00000512340 ESRRAP11474 423 aaPredicted RBP6.86□□□□□ -1.31
NR1I3-231ENST00000512340 MATN1P21941 496 aa6.86□□□□□ -1.31
NR1I3-231ENST00000512340 GDF1P27539 372 aa6.86□□□□□ -1.31
NR1I3-231ENST00000512340 CASP3P42574 277 aa6.86□□□□□ -1.31
NR1I3-231ENST00000512340 MRPL19P49406 292 aaKnown RBP6.86□□□□□ -1.31
NR1I3-231ENST00000512340 KHKP50053 298 aa6.86□□□□□ -1.31
NR1I3-231ENST00000512340 IDH3AP50213 366 aa6.86□□□□□ -1.31
NR1I3-231ENST00000512340 CDK9P50750 372 aaKnown RBP6.86□□□□□ -1.31
NR1I3-231ENST00000512340 NME5P56597 212 aa6.86□□□□□ -1.31
NR1I3-231ENST00000512340 GPR85P60893 370 aa6.86□□□□□ -1.31
NR1I3-231ENST00000512340 UFM1P61960 85 aa6.86□□□□□ -1.31
NR1I3-231ENST00000512340 DUSP2Q05923 314 aa6.86□□□□□ -1.31
NR1I3-231ENST00000512340 LASP1Q14847 261 aaKnown RBP6.86□□□□□ -1.31
NR1I3-231ENST00000512340 ZNF385BQ569K4 471 aa6.86□□□□□ -1.31
NR1I3-231ENST00000512340 CT45A2Q5DJT8 189 aa6.86□□□□□ -1.31
NR1I3-231ENST00000512340 SPANXN4Q5MJ08 99 aa6.86□□□□□ -1.31
NR1I3-231ENST00000512340 C6orf10Q5SRN2 563 aa6.86□□□□□ -1.31
NR1I3-231ENST00000512340 PRAMEF20Q5VT98 475 aa6.86□□□□□ -1.31
NR1I3-231ENST00000512340 MFSD12Q6NUT3 480 aa6.86□□□□□ -1.31
NR1I3-231ENST00000512340 C16orf47Q6ZP98 133 aaPredicted RBP6.86□□□□□ -1.31
NR1I3-231ENST00000512340 ZNF621Q6ZSS3 439 aa6.86□□□□□ -1.31
NR1I3-231ENST00000512340 PRR22Q8IZ63 422 aa6.86□□□□□ -1.31
NR1I3-231ENST00000512340 CPSF7Q8N684 471 aaKnown RBP6.86□□□□□ -1.31
NR1I3-231ENST00000512340 OR4K17Q8NGC6 315 aa6.86□□□□□ -1.31
NR1I3-231ENST00000512340 PRR7Q8TB68 274 aa6.86□□□□□ -1.31
NR1I3-231ENST00000512340 TSPEARQ8WU66 669 aa6.86□□□□□ -1.31
NR1I3-231ENST00000512340 OIT3Q8WWZ8 545 aa6.86□□□□□ -1.31
NR1I3-231ENST00000512340 SARAFQ96BY9 339 aa6.86□□□□□ -1.31
NR1I3-231ENST00000512340 FAM120BQ96EK7 910 aaKnown RBP6.86□□□□□ -1.31
NR1I3-231ENST00000512340 RMND5BQ96G75 393 aaPredicted RBP6.86□□□□□ -1.31
NR1I3-231ENST00000512340 TMEM41AQ96HV5 264 aa6.86□□□□□ -1.31
NR1I3-231ENST00000512340 GPR137Q96N19 417 aa6.86□□□□□ -1.31
NR1I3-231ENST00000512340 CCDC115Q96NT0 180 aa6.86□□□□□ -1.31
NR1I3-231ENST00000512340 BARD1Q99728 777 aaKnown RBP6.86□□□□□ -1.31
NR1I3-231ENST00000512340 ANGPTL4Q9BY76 406 aa6.86□□□□□ -1.31
NR1I3-231ENST00000512340 MMADHCQ9H3L0 296 aaPredicted RBP6.86□□□□□ -1.31
NR1I3-231ENST00000512340 CCDC134Q9H6E4 229 aa6.86□□□□□ -1.31
NR1I3-231ENST00000512340 ARMC7Q9H6L4 198 aa6.86□□□□□ -1.31
NR1I3-231ENST00000512340 POLE3Q9NRF9 147 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms