RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 GOT1L1Q8NHS2 421 aaPredicted RBP6.06□□□□□ -1.44
COPS4-209ENST00000511653 LINC01560Q8TB33 94 aa6.06□□□□□ -1.44
COPS4-209ENST00000511653 SLC22A8Q8TCC7 542 aa6.06□□□□□ -1.44
COPS4-209ENST00000511653 ZNF473Q8WTR7 871 aaKnown RBP6.06□□□□□ -1.44
COPS4-209ENST00000511653 FAM222BQ8WU58 562 aa6.06□□□□□ -1.44
COPS4-209ENST00000511653 ANKRD7Q92527 254 aa6.06□□□□□ -1.44
COPS4-209ENST00000511653 FBXL20Q96IG2 436 aa6.06□□□□□ -1.44
COPS4-209ENST00000511653 VPS39Q96JC1 886 aa6.06□□□□□ -1.44
COPS4-209ENST00000511653 DGAT2Q96PD7 388 aa6.06□□□□□ -1.44
COPS4-209ENST00000511653 KCNC2Q96PR1 638 aa6.06□□□□□ -1.44
COPS4-209ENST00000511653 OSBPL9Q96SU4 736 aa6.06□□□□□ -1.44
COPS4-209ENST00000511653 ERVK-6Q9BXR3 956 aa6.06□□□□□ -1.44
COPS4-209ENST00000511653 MRPL46Q9H2W6 279 aaKnown RBP6.06□□□□□ -1.44
COPS4-209ENST00000511653 C12orf65Q9H3J6 166 aaKnown RBP6.06□□□□□ -1.44
COPS4-209ENST00000511653 EHD1Q9H4M9 534 aa6.06□□□□□ -1.44
COPS4-209ENST00000511653 PLEKHF2Q9H8W4 249 aa6.06□□□□□ -1.44
COPS4-209ENST00000511653 ACKR4Q9NPB9 350 aa6.06□□□□□ -1.44
COPS4-209ENST00000511653 GPRC5BQ9NZH0 403 aa6.06□□□□□ -1.44
COPS4-209ENST00000511653 TAGLN3Q9UI15 199 aa6.06□□□□□ -1.44
COPS4-209ENST00000511653 OAZ3Q9UMX2 235 aa6.06□□□□□ -1.44
COPS4-209ENST00000511653 BOKQ9UMX3 212 aaPredicted RBP6.06□□□□□ -1.44
COPS4-209ENST00000511653 SLC45A2Q9UMX9 530 aa6.06□□□□□ -1.44
COPS4-209ENST00000511653 ERVK-19Q9WJR5 959 aa6.06□□□□□ -1.44
COPS4-209ENST00000511653 JRKLQ9Y4A0 524 aa6.06□□□□□ -1.44
COPS4-209ENST00000511653 SYNDIG1LA6NDD5 238 aa6.05□□□□□ -1.44
COPS4-209ENST00000511653 GOLGA6L6A8MZA4 724 aa6.05□□□□□ -1.44
COPS4-209ENST00000511653 TRIM3O75382 744 aaPredicted RBP6.05□□□□□ -1.44
COPS4-209ENST00000511653 STK16O75716 305 aa6.05□□□□□ -1.44
COPS4-209ENST00000511653 EPPINO95925 133 aa6.05□□□□□ -1.44
COPS4-209ENST00000511653 CD1DP15813 335 aa6.05□□□□□ -1.44
COPS4-209ENST00000511653 CPN2P22792 545 aa6.05□□□□□ -1.44
COPS4-209ENST00000511653 GDF1P27539 372 aa6.05□□□□□ -1.44
COPS4-209ENST00000511653 GGT5P36269 586 aa6.05□□□□□ -1.44
COPS4-209ENST00000511653 SSR2P43308 183 aa6.05□□□□□ -1.44
COPS4-209ENST00000511653 HNRNPH2P55795 449 aaKnown RBP6.05□□□□□ -1.44
COPS4-209ENST00000511653 CHIT1Q13231 466 aa6.05□□□□□ -1.44
COPS4-209ENST00000511653 KEAP1Q14145 624 aa6.05□□□□□ -1.44
COPS4-209ENST00000511653 RCN2Q14257 317 aa6.05□□□□□ -1.44
COPS4-209ENST00000511653 DAZAP2Q15038 168 aaPredicted RBP6.05□□□□□ -1.44
COPS4-209ENST00000511653 PDK4Q16654 411 aa6.05□□□□□ -1.44
COPS4-209ENST00000511653 FNDC7Q5VTL7 733 aa6.05□□□□□ -1.44
COPS4-209ENST00000511653 PLXDC2Q6UX71 529 aa6.05□□□□□ -1.44
COPS4-209ENST00000511653 LRRC8AQ8IWT6 810 aa6.05□□□□□ -1.44
COPS4-209ENST00000511653 PDIK1LQ8N165 341 aa6.05□□□□□ -1.44
COPS4-209ENST00000511653 SLC35F6Q8N357 371 aa6.05□□□□□ -1.44
COPS4-209ENST00000511653 LIX1Q8N485 282 aa6.05□□□□□ -1.44
COPS4-209ENST00000511653 PDPRQ8NCN5 879 aa6.05□□□□□ -1.44
COPS4-209ENST00000511653 BBOF1Q8ND07 529 aa6.05□□□□□ -1.44
COPS4-209ENST00000511653 FBXO36Q8NEA4 188 aa6.05□□□□□ -1.44
COPS4-209ENST00000511653 ACTRT1Q8TDG2 376 aa6.05□□□□□ -1.44
COPS4-209ENST00000511653 EXT2Q93063 718 aa6.05□□□□□ -1.44
COPS4-209ENST00000511653 UCN3Q969E3 161 aa6.05□□□□□ -1.44
COPS4-209ENST00000511653 PTCD3Q96EY7 689 aaKnown RBP6.05□□□□□ -1.44
COPS4-209ENST00000511653 NAP1L3Q99457 506 aaPredicted RBP6.05□□□□□ -1.44
COPS4-209ENST00000511653 TBCDQ9BTW9 1192 aa6.05□□□□□ -1.44
COPS4-209ENST00000511653 DOHHQ9BU89 302 aa6.05□□□□□ -1.44
COPS4-209ENST00000511653 EFCAB11Q9BUY7 163 aa6.05□□□□□ -1.44
COPS4-209ENST00000511653 MRI1Q9BV20 369 aa6.05□□□□□ -1.44
COPS4-209ENST00000511653 DERL2Q9GZP9 239 aa6.05□□□□□ -1.44
COPS4-209ENST00000511653 WWTR1Q9GZV5 400 aa6.05□□□□□ -1.44
COPS4-209ENST00000511653 OR51B5Q9H339 312 aa6.05□□□□□ -1.44
COPS4-209ENST00000511653 UBQLN3Q9H347 655 aa6.05□□□□□ -1.44
COPS4-209ENST00000511653 RHOJQ9H4E5 214 aa6.05□□□□□ -1.44
COPS4-209ENST00000511653 MTO1Q9Y2Z2 717 aaKnown RBP6.05□□□□□ -1.44
COPS4-209ENST00000511653 SLC6A5Q9Y345 797 aa6.05□□□□□ -1.44
COPS4-209ENST00000511653 PCDHGB3Q9Y5G1 929 aa6.05□□□□□ -1.44
COPS4-209ENST00000511653 GOLGA6L10A0A0M3HER8 536 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 TUBAL3A6NHL2 446 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 GLOD5A6NK44 160 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 CLCA1A8K7I4 914 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 PLPP1O14494 284 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 HOXA3O43365 443 aaPredicted RBP6.04□□□□□ -1.44
COPS4-209ENST00000511653 CCNT2O60583 730 aaKnown RBP6.04□□□□□ -1.44
COPS4-209ENST00000511653 CDC14BO60729 498 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 C1QAP02745 245 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 CCDC166P0CW27 439 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 PCNAP12004 261 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 COX7A2P14406 83 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 HPDP32754 393 aaPredicted RBP6.04□□□□□ -1.44
COPS4-209ENST00000511653 PTTG1IPP53801 180 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 SLC37A1P57057 533 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 FBXW4P57775 412 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 DCAF7P61962 342 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 PLIN5Q00G26 463 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 TNFRSF17Q02223 184 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 IRF8Q02556 426 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 TGM3Q08188 693 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 SLAMF1Q13291 335 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 DDX39BQ13838 428 aaKnown RBP6.04□□□□□ -1.44
COPS4-209ENST00000511653 E2F2Q14209 437 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 FRG1Q14331 258 aaKnown RBP6.04□□□□□ -1.44
COPS4-209ENST00000511653 MORF4L2Q15014 288 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 RPS6KA2Q15349 733 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 NTRK2Q16620 822 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 C10orf62Q5T681 223 aaPredicted RBP6.04□□□□□ -1.44
COPS4-209ENST00000511653 TMEM198Q66K66 360 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 CAMKMTQ7Z624 323 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 BIVMQ86UB2 503 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 GPSM1Q86YR5 675 aa6.04□□□□□ -1.44
COPS4-209ENST00000511653 LACC1Q8IV20 430 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms