RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 CAPN3P20807 821 aa11.8□□□□□ -0.52
COL6A6-203ENST00000511332 DRD4P21917 467 aa11.8□□□□□ -0.52
COL6A6-203ENST00000511332 MATN1P21941 496 aa11.8□□□□□ -0.52
COL6A6-203ENST00000511332 ADSLP30566 484 aaPredicted RBP11.8□□□□□ -0.52
COL6A6-203ENST00000511332 CDKN2CP42773 168 aa11.8□□□□□ -0.52
COL6A6-203ENST00000511332 RFX3P48380 749 aa11.8□□□□□ -0.52
COL6A6-203ENST00000511332 RPS26P62854 115 aaKnown RBP11.8□□□□□ -0.52
COL6A6-203ENST00000511332 ALDH6A1Q02252 535 aaKnown RBP11.8□□□□□ -0.52
COL6A6-203ENST00000511332 PLGLB1Q02325 96 aa11.8□□□□□ -0.52
COL6A6-203ENST00000511332 MAPRE2Q15555 327 aa11.8□□□□□ -0.52
COL6A6-203ENST00000511332 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.8□□□□□ -0.52
COL6A6-203ENST00000511332 SLC30A6Q6NXT4 461 aa11.8□□□□□ -0.52
COL6A6-203ENST00000511332 SLC2A7Q6PXP3 512 aa11.8□□□□□ -0.52
COL6A6-203ENST00000511332 PACS2Q86VP3 889 aa11.8□□□□□ -0.52
COL6A6-203ENST00000511332 SLC22A16Q86VW1 577 aa11.8□□□□□ -0.52
COL6A6-203ENST00000511332 CLEC4FQ8N1N0 589 aa11.8□□□□□ -0.52
COL6A6-203ENST00000511332 NR4A3Q92570 626 aa11.8□□□□□ -0.52
COL6A6-203ENST00000511332 GTF2H4Q92759 462 aa11.8□□□□□ -0.52
COL6A6-203ENST00000511332 DTNBP1Q96EV8 351 aa11.8□□□□□ -0.52
COL6A6-203ENST00000511332 OTUB1Q96FW1 271 aaPredicted RBP11.8□□□□□ -0.52
COL6A6-203ENST00000511332 OR7D2Q96RA2 312 aa11.8□□□□□ -0.52
COL6A6-203ENST00000511332 BARD1Q99728 777 aaKnown RBP11.8□□□□□ -0.52
COL6A6-203ENST00000511332 ELAC2Q9BQ52 826 aaKnown RBP11.8□□□□□ -0.52
COL6A6-203ENST00000511332 ANGPTL4Q9BY76 406 aa11.8□□□□□ -0.52
COL6A6-203ENST00000511332 IL1RL2Q9HB29 575 aa11.8□□□□□ -0.52
COL6A6-203ENST00000511332 SAR1AQ9NR31 198 aa11.8□□□□□ -0.52
COL6A6-203ENST00000511332 EXD2Q9NVH0 621 aa11.8□□□□□ -0.52
COL6A6-203ENST00000511332 B4GALT7Q9UBV7 327 aa11.8□□□□□ -0.52
COL6A6-203ENST00000511332 LEF1Q9UJU2 399 aaPredicted RBP11.8□□□□□ -0.52
COL6A6-203ENST00000511332 NTNG1Q9Y2I2 539 aa11.8□□□□□ -0.52
COL6A6-203ENST00000511332 CCDC22O60826 627 aa11.79□□□□□ -0.52
COL6A6-203ENST00000511332 ICOSLGO75144 302 aa11.79□□□□□ -0.52
COL6A6-203ENST00000511332 KCNK2O95069 426 aa11.79□□□□□ -0.52
COL6A6-203ENST00000511332 GSNP06396 782 aa11.79□□□□□ -0.52
COL6A6-203ENST00000511332 SNRPB2P08579 225 aaKnown RBP11.79□□□□□ -0.52
COL6A6-203ENST00000511332 CYP4B1P13584 511 aa11.79□□□□□ -0.52
COL6A6-203ENST00000511332 ATP6V1C1P21283 382 aa11.79□□□□□ -0.52
COL6A6-203ENST00000511332 ELAVL4P26378 380 aaKnown RBP11.79□□□□□ -0.52
COL6A6-203ENST00000511332 EVI2BP34910 448 aa11.79□□□□□ -0.52
COL6A6-203ENST00000511332 CASP3P42574 277 aa11.79□□□□□ -0.52
COL6A6-203ENST00000511332 MASP1P48740 699 aa11.79□□□□□ -0.52
COL6A6-203ENST00000511332 DNASE1L1P49184 302 aa11.79□□□□□ -0.52
COL6A6-203ENST00000511332 MAN2A2P49641 1150 aa11.79□□□□□ -0.52
COL6A6-203ENST00000511332 CLK3P49761 638 aaKnown RBP11.79□□□□□ -0.52
COL6A6-203ENST00000511332 DCST2Q5T1A1 773 aa11.79□□□□□ -0.52
COL6A6-203ENST00000511332 ATAD3BQ5T9A4 648 aa11.79□□□□□ -0.52
COL6A6-203ENST00000511332 TNFAIP8L2Q6P589 184 aaPredicted RBP11.79□□□□□ -0.52
COL6A6-203ENST00000511332 BNC2Q6ZN30 1099 aaPredicted RBP11.79□□□□□ -0.52
COL6A6-203ENST00000511332 C16orf62Q7Z3J2 963 aa11.79□□□□□ -0.52
COL6A6-203ENST00000511332 ATCAYQ86WG3 371 aa11.79□□□□□ -0.52
COL6A6-203ENST00000511332 RNF130Q86XS8 419 aa11.79□□□□□ -0.52
COL6A6-203ENST00000511332 OR5D16Q8NGK9 328 aa11.79□□□□□ -0.52
COL6A6-203ENST00000511332 MIB2Q96AX9 1013 aa11.79□□□□□ -0.52
COL6A6-203ENST00000511332 TMEM41AQ96HV5 264 aa11.79□□□□□ -0.52
COL6A6-203ENST00000511332 PHF12Q96QT6 1004 aa11.79□□□□□ -0.52
COL6A6-203ENST00000511332 NODALQ96S42 347 aa11.79□□□□□ -0.52
COL6A6-203ENST00000511332 SLX1AQ9BQ83 275 aa11.79□□□□□ -0.52
COL6A6-203ENST00000511332 TTTY12Q9BZ98 90 aa11.79□□□□□ -0.52
COL6A6-203ENST00000511332 OR51I1Q9H343 314 aa11.79□□□□□ -0.52
COL6A6-203ENST00000511332 RAD21L1Q9H4I0 556 aa11.79□□□□□ -0.52
COL6A6-203ENST00000511332 SERHL2Q9H4I8 314 aa11.79□□□□□ -0.52
COL6A6-203ENST00000511332 HHATLQ9HCP6 504 aa11.79□□□□□ -0.52
COL6A6-203ENST00000511332 TUBA8Q9NY65 449 aaPredicted RBP11.79□□□□□ -0.52
COL6A6-203ENST00000511332 WIF1Q9Y5W5 379 aa11.79□□□□□ -0.52
COL6A6-203ENST00000511332 CAPN7Q9Y6W3 813 aa11.79□□□□□ -0.52
COL6A6-203ENST00000511332 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.79□□□□□ -0.52
COL6A6-203ENST00000511332 BBIP1A8MTZ0 92 aa11.78□□□□□ -0.52
COL6A6-203ENST00000511332 SNX3O60493 162 aa11.78□□□□□ -0.52
COL6A6-203ENST00000511332 TRIM3O75382 744 aaPredicted RBP11.78□□□□□ -0.52
COL6A6-203ENST00000511332 GLSO94925 669 aaPredicted RBP11.78□□□□□ -0.52
COL6A6-203ENST00000511332 UTS2O95399 124 aa11.78□□□□□ -0.52
COL6A6-203ENST00000511332 NGFRP08138 427 aa11.78□□□□□ -0.52
COL6A6-203ENST00000511332 EDN3P14138 238 aa11.78□□□□□ -0.52
COL6A6-203ENST00000511332 PPIBP23284 216 aaKnown RBP11.78□□□□□ -0.52
COL6A6-203ENST00000511332 PTPN6P29350 595 aa11.78□□□□□ -0.52
COL6A6-203ENST00000511332 RFC3P40938 356 aa11.78□□□□□ -0.52
COL6A6-203ENST00000511332 HPCAP84074 193 aa11.78□□□□□ -0.52
COL6A6-203ENST00000511332 FOXK1P85037 733 aa11.78□□□□□ -0.52
COL6A6-203ENST00000511332 KLF10Q13118 480 aa11.78□□□□□ -0.52
COL6A6-203ENST00000511332 UBAP2LQ14157 1087 aaKnown RBP11.78□□□□□ -0.52
COL6A6-203ENST00000511332 HYAL4Q2M3T9 481 aa11.78□□□□□ -0.52
COL6A6-203ENST00000511332 LRIF1Q5T3J3 769 aa11.78□□□□□ -0.52
COL6A6-203ENST00000511332 BICRALQ6AI39 1079 aa11.78□□□□□ -0.52
COL6A6-203ENST00000511332 ZNF324BQ6AW86 544 aaPredicted RBP11.78□□□□□ -0.52
COL6A6-203ENST00000511332 FIGNL1Q6PIW4 674 aa11.78□□□□□ -0.52
COL6A6-203ENST00000511332 ZNF527Q8NB42 609 aa11.78□□□□□ -0.52
COL6A6-203ENST00000511332 GALNT11Q8NCW6 608 aa11.78□□□□□ -0.52
COL6A6-203ENST00000511332 CHDHQ8NE62 594 aaPredicted RBP11.78□□□□□ -0.52
COL6A6-203ENST00000511332 FAM110BQ8TC76 370 aa11.78□□□□□ -0.52
COL6A6-203ENST00000511332 ZFP90Q8TF47 636 aa11.78□□□□□ -0.52
COL6A6-203ENST00000511332 RNF138Q8WVD3 245 aa11.78□□□□□ -0.52
COL6A6-203ENST00000511332 JSRP1Q96MG2 331 aaPredicted RBP11.78□□□□□ -0.52
COL6A6-203ENST00000511332 NMUR2Q9GZQ4 415 aa11.78□□□□□ -0.52
COL6A6-203ENST00000511332 PAIP1Q9H074 479 aaKnown RBP11.78□□□□□ -0.52
COL6A6-203ENST00000511332 TPT1P8Q9HAU6 139 aa11.78□□□□□ -0.52
COL6A6-203ENST00000511332 ZFP64Q9NPA5 681 aa11.78□□□□□ -0.52
COL6A6-203ENST00000511332 SLC52A3Q9NQ40 469 aa11.78□□□□□ -0.52
COL6A6-203ENST00000511332 SLC6A13Q9NSD5 602 aa11.78□□□□□ -0.52
COL6A6-203ENST00000511332 THUMPD1Q9NXG2 353 aaKnown RBP11.78□□□□□ -0.52
COL6A6-203ENST00000511332 CORO2BQ9UQ03 480 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms