RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 DNAJC13O75165 2243 aa12.77□□□□□ -0.37
DDX41-212ENST00000511040 LRRK2Q5S007 2527 aa12.77□□□□□ -0.37
DDX41-212ENST00000511040 UQCRHLA0A096LP55 91 aa12.76□□□□□ -0.37
DDX41-212ENST00000511040 SLCO1B7G3V0H7 640 aa12.76□□□□□ -0.37
DDX41-212ENST00000511040 ZNF195O14628 629 aa12.76□□□□□ -0.37
DDX41-212ENST00000511040 SNPHO15079 494 aa12.76□□□□□ -0.37
DDX41-212ENST00000511040 DIAPH2O60879 1101 aa12.76□□□□□ -0.37
DDX41-212ENST00000511040 IL33O95760 270 aa12.76□□□□□ -0.37
DDX41-212ENST00000511040 CLDN1O95832 211 aa12.76□□□□□ -0.37
DDX41-212ENST00000511040 ALOX5P09917 674 aa12.76□□□□□ -0.37
DDX41-212ENST00000511040 TCEA1P23193 301 aaKnown RBP12.76□□□□□ -0.37
DDX41-212ENST00000511040 PTPN6P29350 595 aa12.76□□□□□ -0.37
DDX41-212ENST00000511040 CCT3P49368 545 aaKnown RBP12.76□□□□□ -0.37
DDX41-212ENST00000511040 HBA1P69905 142 aa12.76□□□□□ -0.37
DDX41-212ENST00000511040 PSPHP78330 225 aa12.76□□□□□ -0.37
DDX41-212ENST00000511040 PHC1P78364 1004 aa12.76□□□□□ -0.37
DDX41-212ENST00000511040 MRPS22P82650 360 aaKnown RBP12.76□□□□□ -0.37
DDX41-212ENST00000511040 PRR5P85299 388 aa12.76□□□□□ -0.37
DDX41-212ENST00000511040 STX5Q13190 355 aa12.76□□□□□ -0.37
DDX41-212ENST00000511040 TP53BP2Q13625 1128 aa12.76□□□□□ -0.37
DDX41-212ENST00000511040 LASP1Q14847 261 aaKnown RBP12.76□□□□□ -0.37
DDX41-212ENST00000511040 DUSP5Q16690 384 aa12.76□□□□□ -0.37
DDX41-212ENST00000511040 SPANXN4Q5MJ08 99 aa12.76□□□□□ -0.37
DDX41-212ENST00000511040 OGFOD2Q6N063 350 aa12.76□□□□□ -0.37
DDX41-212ENST00000511040 FIGNL1Q6PIW4 674 aa12.76□□□□□ -0.37
DDX41-212ENST00000511040 SPATA19Q7Z5L4 167 aa12.76□□□□□ -0.37
DDX41-212ENST00000511040 CAMKMTQ7Z624 323 aa12.76□□□□□ -0.37
DDX41-212ENST00000511040 YRDCQ86U90 279 aaKnown RBP12.76□□□□□ -0.37
DDX41-212ENST00000511040 NATD1Q8N6N6 113 aa12.76□□□□□ -0.37
DDX41-212ENST00000511040 CDRT4Q8N9R6 151 aa12.76□□□□□ -0.37
DDX41-212ENST00000511040 WDSUB1Q8N9V3 476 aa12.76□□□□□ -0.37
DDX41-212ENST00000511040 PIWIL2Q8TC59 973 aaKnown RBP12.76□□□□□ -0.37
DDX41-212ENST00000511040 HOXB13Q92826 284 aaPredicted RBP12.76□□□□□ -0.37
DDX41-212ENST00000511040 OR52B2Q96RD2 323 aa12.76□□□□□ -0.37
DDX41-212ENST00000511040 PNPLA3Q9NST1 481 aa12.76□□□□□ -0.37
DDX41-212ENST00000511040 INTS9Q9NV88 658 aaKnown RBP12.76□□□□□ -0.37
DDX41-212ENST00000511040 ACAD8Q9UKU7 415 aa12.76□□□□□ -0.37
DDX41-212ENST00000511040 SLC6A5Q9Y345 797 aa12.76□□□□□ -0.37
DDX41-212ENST00000511040 USH1CQ9Y6N9 552 aa12.76□□□□□ -0.37
DDX41-212ENST00000511040 NUP214P35658 2090 aaPredicted RBP12.76□□□□□ -0.37
DDX41-212ENST00000511040 FREM3P0C091 2139 aa12.76□□□□□ -0.37
DDX41-212ENST00000511040 C15orf38-AP3S2A0A0A6YYH1 394 aa12.75□□□□□ -0.37
DDX41-212ENST00000511040 A0A1B0GVC2 190 aa12.75□□□□□ -0.37
DDX41-212ENST00000511040 AQP7O14520 342 aa12.75□□□□□ -0.37
DDX41-212ENST00000511040 ADAM10O14672 748 aa12.75□□□□□ -0.37
DDX41-212ENST00000511040 SUSD5O60279 629 aa12.75□□□□□ -0.37
DDX41-212ENST00000511040 HCN1O60741 890 aa12.75□□□□□ -0.37
DDX41-212ENST00000511040 NKX2-2O95096 273 aa12.75□□□□□ -0.37
DDX41-212ENST00000511040 KCNH1O95259 989 aa12.75□□□□□ -0.37
DDX41-212ENST00000511040 UTS2O95399 124 aa12.75□□□□□ -0.37
DDX41-212ENST00000511040 CPSF4O95639 269 aaKnown RBP12.75□□□□□ -0.37
DDX41-212ENST00000511040 HMGN2P05204 90 aaKnown RBP12.75□□□□□ -0.37
DDX41-212ENST00000511040 EVI2BP34910 448 aa12.75□□□□□ -0.37
DDX41-212ENST00000511040 MAP3K8P41279 467 aa12.75□□□□□ -0.37
DDX41-212ENST00000511040 KIR3DL1P43629 444 aa12.75□□□□□ -0.37
DDX41-212ENST00000511040 PRIM2P49643 509 aa12.75□□□□□ -0.37
DDX41-212ENST00000511040 DGKQP52824 942 aa12.75□□□□□ -0.37
DDX41-212ENST00000511040 GAS1P54826 345 aa12.75□□□□□ -0.37
DDX41-212ENST00000511040 RPS26P62854 115 aaKnown RBP12.75□□□□□ -0.37
DDX41-212ENST00000511040 ADORA2A-AS1P86434 159 aa12.75□□□□□ -0.37
DDX41-212ENST00000511040 SNTA1Q13424 505 aa12.75□□□□□ -0.37
DDX41-212ENST00000511040 FAM174BQ3ZCQ3 159 aa12.75□□□□□ -0.37
DDX41-212ENST00000511040 VPS26BQ4G0F5 336 aa12.75□□□□□ -0.37
DDX41-212ENST00000511040 GXYLT1Q4G148 440 aa12.75□□□□□ -0.37
DDX41-212ENST00000511040 EIPR1Q53HC9 387 aa12.75□□□□□ -0.37
DDX41-212ENST00000511040 EMC4Q5J8M3 183 aa12.75□□□□□ -0.37
DDX41-212ENST00000511040 WIPI1Q5MNZ9 446 aaPredicted RBP12.75□□□□□ -0.37
DDX41-212ENST00000511040 CCNJQ5T5M9 372 aa12.75□□□□□ -0.37
DDX41-212ENST00000511040 ZNF585AQ6P3V2 769 aa12.75□□□□□ -0.37
DDX41-212ENST00000511040 TMEM81Q6P7N7 255 aa12.75□□□□□ -0.37
DDX41-212ENST00000511040 ZAR1Q86SH2 424 aa12.75□□□□□ -0.37
DDX41-212ENST00000511040 LRRC34Q8IZ02 419 aa12.75□□□□□ -0.37
DDX41-212ENST00000511040 RPRMLQ8N4K4 120 aa12.75□□□□□ -0.37
DDX41-212ENST00000511040 OR56A1Q8NGH5 318 aa12.75□□□□□ -0.37
DDX41-212ENST00000511040 OR4A15Q8NGL6 344 aa12.75□□□□□ -0.37
DDX41-212ENST00000511040 ITLN2Q8WWU7 325 aaPredicted RBP12.75□□□□□ -0.37
DDX41-212ENST00000511040 CDS1Q92903 461 aa12.75□□□□□ -0.37
DDX41-212ENST00000511040 C7orf26Q96N11 449 aa12.75□□□□□ -0.37
DDX41-212ENST00000511040 RTN4RQ9BZR6 473 aa12.75□□□□□ -0.37
DDX41-212ENST00000511040 UBQLN3Q9H347 655 aa12.75□□□□□ -0.37
DDX41-212ENST00000511040 ACKR4Q9NPB9 350 aa12.75□□□□□ -0.37
DDX41-212ENST00000511040 FBXO34Q9NWN3 711 aa12.75□□□□□ -0.37
DDX41-212ENST00000511040 ALKBH4Q9NXW9 302 aa12.75□□□□□ -0.37
DDX41-212ENST00000511040 PLEKHB1Q9UF11 243 aaPredicted RBP12.75□□□□□ -0.37
DDX41-212ENST00000511040 FBXL2Q9UKC9 423 aa12.75□□□□□ -0.37
DDX41-212ENST00000511040 MRTO4Q9UKD2 239 aaKnown RBP12.75□□□□□ -0.37
DDX41-212ENST00000511040 ICE1Q9Y2F5 2266 aa12.75□□□□□ -0.37
DDX41-212ENST00000511040 WIF1Q9Y5W5 379 aa12.75□□□□□ -0.37
DDX41-212ENST00000511040 GPR45Q9Y5Y3 372 aa12.75□□□□□ -0.37
DDX41-212ENST00000511040 TTC36A6NLP5 189 aa12.74□□□□□ -0.37
DDX41-212ENST00000511040 B4DXG7 233 aa12.74□□□□□ -0.37
DDX41-212ENST00000511040 E9PBE3 544 aa12.74□□□□□ -0.37
DDX41-212ENST00000511040 RNASET2O00584 256 aaKnown RBP12.74□□□□□ -0.37
DDX41-212ENST00000511040 FADS1O60427 444 aa12.74□□□□□ -0.37
DDX41-212ENST00000511040 KCNK2O95069 426 aa12.74□□□□□ -0.37
DDX41-212ENST00000511040 HPNP05981 417 aa12.74□□□□□ -0.37
DDX41-212ENST00000511040 ELAVL4P26378 380 aaKnown RBP12.74□□□□□ -0.37
DDX41-212ENST00000511040 COL8A1P27658 744 aa12.74□□□□□ -0.37
DDX41-212ENST00000511040 IL12AP29459 219 aa12.74□□□□□ -0.37
DDX41-212ENST00000511040 S100A3P33764 101 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms