RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-216ENST00000509784 HMBSP08397 361 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 SNRPAP09012 282 aaKnown RBP2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 SBK2P0C263 348 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 POLR2MP0CAP2 368 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 PRSS56P0CW18 603 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 CD59P13987 128 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 CCDC130P13994 396 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 CHRNB4P30926 498 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 CDH5P33151 784 aaPredicted RBP2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 HSPA1LP34931 641 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 ELK3P41970 407 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 CASP3P42574 277 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 IER3P46695 156 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 CD151P48509 253 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 NUMBP49757 651 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 KHKP50053 298 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 SERPINB9P50453 376 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 SERPINH1P50454 418 aaKnown RBP2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 CDK9P50750 372 aaKnown RBP2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 CLDN17P56750 224 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 KIAA1024LP59773 190 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 SNAP25P60880 206 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 YWHAGP61981 247 aaKnown RBP eCLIP2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 PSMC5P62195 406 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 NOP14P78316 857 aaKnown RBP2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 OTUD4Q01804 1114 aaKnown RBP2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 OGDHQ02218 1023 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 CNTN2Q02246 1040 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 SLC25A11Q02978 314 aaKnown RBP2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 RPA4Q13156 261 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 STX3Q13277 289 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 TMED1Q13445 227 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 CUL2Q13617 745 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 BTG3Q14201 252 aaPredicted RBP2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 CHI3L2Q15782 390 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 SGCBQ16585 318 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 SHROOM1Q2M3G4 852 aaPredicted RBP2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 C2orf76Q3KRA6 126 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 CEP55Q53EZ4 464 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 IFI44LQ53G44 452 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 TFDP3Q5H9I0 405 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 FFAR4Q5NUL3 377 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 FAM72AQ5TYM5 149 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 PRAMEF8Q5VWM4 474 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 PM20D1Q6GTS8 502 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 ZNF770Q6IQ21 691 aaPredicted RBP2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 FAM72DQ6L9T8 149 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 FAM53AQ6NSI3 398 aaPredicted RBP2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 CDC42EP5Q6NZY7 148 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 TATDN1Q6P1N9 297 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 ZFP1Q6P2D0 407 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 TIFABQ6ZNK6 161 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 TMEM179Q6ZVK1 233 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 SLC24A5Q71RS6 500 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 NIPA1Q7RTP0 329 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 MIER3Q7Z3K6 550 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 ZNF410Q86VK4 478 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 FAM72BQ86X60 149 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 NUDCD3Q8IVD9 361 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 SIAH3Q8IW03 269 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 CCDC60Q8IWA6 550 aaPredicted RBP2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 KLHDC8AQ8IYD2 350 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 PDIK1LQ8N165 341 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 GPD1LQ8N335 351 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 FBXW8Q8N3Y1 598 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 PRSS35Q8N3Z0 413 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 SFRP1Q8N474 314 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 ARL10Q8N8L6 244 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 SMYD1Q8NB12 490 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 TMEM178AQ8NBL3 297 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 TMEM161BQ8NDZ6 487 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 LPCAT1Q8NF37 534 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 OR1L3Q8NH93 324 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 ACTL9Q8TC94 416 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 ST7LQ8TDW4 575 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 TFB1MQ8WVM0 346 aaKnown RBP2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 APOBEC4Q8WW27 367 aaKnown RBP2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 SLC35B4Q969S0 331 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 CCDC127Q96BQ5 260 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 CFAP36Q96G28 342 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 PRAC1Q96KF2 57 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 C10orf90Q96M02 699 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 MCEEQ96PE7 176 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 NEDD4LQ96PU5 975 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 KCNK16Q96T55 309 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 RIT2Q99578 217 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 LPAR4Q99677 370 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 CCT7Q99832 543 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 C17orf62Q9BQA9 187 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 EBF4Q9BQW3 602 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 ZNF577Q9BSK1 485 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 ACAT2Q9BWD1 397 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 SLC39A8Q9C0K1 460 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 DEFB129Q9H1M3 183 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 FAM96AQ9H5X1 160 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 EGLN3Q9H6Z9 239 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 SMYD3Q9H7B4 428 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 AKIRIN1Q9H9L7 192 aaPredicted RBP2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 DBNDD1Q9H9R9 158 aa2.78□□□□□ -1.96
CALCOCO2-216ENST00000509784 RPF1Q9H9Y2 349 aaKnown RBP2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms