RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 KRTAP1-1Q07627 177 aa14.32□□□□□ -0.12
RAB40C-202ENST00000509637 C10orf62Q5T681 223 aaPredicted RBP14.32□□□□□ -0.12
RAB40C-202ENST00000509637 AAGABQ6PD74 315 aa14.32□□□□□ -0.12
RAB40C-202ENST00000509637 YTHDF3Q7Z739 585 aaKnown RBP14.32□□□□□ -0.12
RAB40C-202ENST00000509637 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.32□□□□□ -0.12
RAB40C-202ENST00000509637 PERPQ96FX8 193 aa14.32□□□□□ -0.12
RAB40C-202ENST00000509637 ZC3HAV1LQ96H79 300 aaKnown RBP14.32□□□□□ -0.12
RAB40C-202ENST00000509637 TMEM237Q96Q45 408 aa14.32□□□□□ -0.12
RAB40C-202ENST00000509637 PINK1Q9BXM7 581 aa14.32□□□□□ -0.12
RAB40C-202ENST00000509637 EBPLQ9BY08 206 aa14.32□□□□□ -0.12
RAB40C-202ENST00000509637 MRPL46Q9H2W6 279 aaKnown RBP14.32□□□□□ -0.12
RAB40C-202ENST00000509637 RNF122Q9H9V4 155 aa14.32□□□□□ -0.12
RAB40C-202ENST00000509637 UBTD1Q9HAC8 227 aa14.32□□□□□ -0.12
RAB40C-202ENST00000509637 SLC35C2Q9NQQ7 365 aa14.32□□□□□ -0.12
RAB40C-202ENST00000509637 NDRG3Q9UGV2 375 aa14.32□□□□□ -0.12
RAB40C-202ENST00000509637 SNX6Q9UNH7 406 aa14.32□□□□□ -0.12
RAB40C-202ENST00000509637 EIF3LQ9Y262 564 aaKnown RBP14.32□□□□□ -0.12
RAB40C-202ENST00000509637 MYO1GB0I1T2 1018 aa14.31□□□□□ -0.12
RAB40C-202ENST00000509637 ABCB7O75027 752 aa14.31□□□□□ -0.12
RAB40C-202ENST00000509637 CRHP06850 196 aa14.31□□□□□ -0.12
RAB40C-202ENST00000509637 HK1P19367 917 aa14.31□□□□□ -0.12
RAB40C-202ENST00000509637 EVI2BP34910 448 aa14.31□□□□□ -0.12
RAB40C-202ENST00000509637 DIO3P55073 304 aa14.31□□□□□ -0.12
RAB40C-202ENST00000509637 FOXA1P55317 472 aa14.31□□□□□ -0.12
RAB40C-202ENST00000509637 DSCR4P56555 118 aaPredicted RBP14.31□□□□□ -0.12
RAB40C-202ENST00000509637 TMEM44Q2T9K0 475 aa14.31□□□□□ -0.12
RAB40C-202ENST00000509637 ZNF678Q5SXM1 525 aa14.31□□□□□ -0.12
RAB40C-202ENST00000509637 MARCH3Q86UD3 253 aa14.31□□□□□ -0.12
RAB40C-202ENST00000509637 P3H2Q8IVL5 708 aa14.31□□□□□ -0.12
RAB40C-202ENST00000509637 MTBPQ96DY7 904 aa14.31□□□□□ -0.12
RAB40C-202ENST00000509637 FAM111AQ96PZ2 611 aa14.31□□□□□ -0.12
RAB40C-202ENST00000509637 FAIM2Q9BWQ8 316 aa14.31□□□□□ -0.12
RAB40C-202ENST00000509637 TNFRSF12AQ9NP84 129 aa14.31□□□□□ -0.12
RAB40C-202ENST00000509637 PSME2Q9UL46 239 aa14.31□□□□□ -0.12
RAB40C-202ENST00000509637 TMCO1Q9UM00 188 aa14.31□□□□□ -0.12
RAB40C-202ENST00000509637 FBN1P35555 2871 aaKnown RBP14.3□□□□□ -0.12
RAB40C-202ENST00000509637 GXYLT2A0PJZ3 443 aa14.3□□□□□ -0.12
RAB40C-202ENST00000509637 INAFM1C9JVW0 142 aa14.3□□□□□ -0.12
RAB40C-202ENST00000509637 POC1B-GALNT4F8VUJ3 575 aa14.3□□□□□ -0.12
RAB40C-202ENST00000509637 UBFD1O14562 309 aaKnown RBP14.3□□□□□ -0.12
RAB40C-202ENST00000509637 SEC14L5O43304 696 aa14.3□□□□□ -0.12
RAB40C-202ENST00000509637 EMC8O43402 210 aa14.3□□□□□ -0.12
RAB40C-202ENST00000509637 PCDH7O60245 1069 aa14.3□□□□□ -0.12
RAB40C-202ENST00000509637 TNFRSF21O75509 655 aa14.3□□□□□ -0.12
RAB40C-202ENST00000509637 PSMG1O95456 288 aa14.3□□□□□ -0.12
RAB40C-202ENST00000509637 ESRRBO95718 433 aa14.3□□□□□ -0.12
RAB40C-202ENST00000509637 COL6A2P12110 1019 aa14.3□□□□□ -0.12
RAB40C-202ENST00000509637 PEPDP12955 493 aa14.3□□□□□ -0.12
RAB40C-202ENST00000509637 CASQ1P31415 396 aa14.3□□□□□ -0.12
RAB40C-202ENST00000509637 GCKP35557 465 aa14.3□□□□□ -0.12
RAB40C-202ENST00000509637 ETF1P62495 437 aaKnown RBP14.3□□□□□ -0.12
RAB40C-202ENST00000509637 BTKQ06187 659 aa14.3□□□□□ -0.12
RAB40C-202ENST00000509637 STX5Q13190 355 aa14.3□□□□□ -0.12
RAB40C-202ENST00000509637 EFR3AQ14156 821 aa14.3□□□□□ -0.12
RAB40C-202ENST00000509637 TSNAXIP1Q2TAA8 658 aa14.3□□□□□ -0.12
RAB40C-202ENST00000509637 P4HA3Q7Z4N8 544 aa14.3□□□□□ -0.12
RAB40C-202ENST00000509637 GGNQ86UU5 652 aa14.3□□□□□ -0.12
RAB40C-202ENST00000509637 OR4K17Q8NGC6 315 aa14.3□□□□□ -0.12
RAB40C-202ENST00000509637 DUSP19Q8WTR2 217 aa14.3□□□□□ -0.12
RAB40C-202ENST00000509637 ACBD3Q9H3P7 528 aa14.3□□□□□ -0.12
RAB40C-202ENST00000509637 PFDN4Q9NQP4 134 aa14.3□□□□□ -0.12
RAB40C-202ENST00000509637 UPK1AO00322 258 aa14.29□□□□□ -0.12
RAB40C-202ENST00000509637 ARHGEF9O43307 516 aa14.29□□□□□ -0.12
RAB40C-202ENST00000509637 SUPT7LO94864 414 aa14.29□□□□□ -0.12
RAB40C-202ENST00000509637 JUNP05412 331 aaKnown RBP14.29□□□□□ -0.12
RAB40C-202ENST00000509637 INHBAP08476 426 aa14.29□□□□□ -0.12
RAB40C-202ENST00000509637 NID1P14543 1247 aa14.29□□□□□ -0.12
RAB40C-202ENST00000509637 POU2F1P14859 743 aa14.29□□□□□ -0.12
RAB40C-202ENST00000509637 IL12BP29460 328 aa14.29□□□□□ -0.12
RAB40C-202ENST00000509637 TIA1P31483 386 aaKnown RBP eCLIP14.29□□□□□ -0.12
RAB40C-202ENST00000509637 PON3Q15166 354 aa14.29□□□□□ -0.12
RAB40C-202ENST00000509637 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.29□□□□□ -0.12
RAB40C-202ENST00000509637 SH2D4BQ5SQS7 431 aa14.29□□□□□ -0.12
RAB40C-202ENST00000509637 TEX35Q5T0J7 233 aa14.29□□□□□ -0.12
RAB40C-202ENST00000509637 GALNT18Q6P9A2 607 aa14.29□□□□□ -0.12
RAB40C-202ENST00000509637 PRSS57Q6UWY2 283 aa14.29□□□□□ -0.12
RAB40C-202ENST00000509637 ZAR1Q86SH2 424 aa14.29□□□□□ -0.12
RAB40C-202ENST00000509637 NUDT8Q8WV74 236 aa14.29□□□□□ -0.12
RAB40C-202ENST00000509637 PIGTQ969N2 578 aa14.29□□□□□ -0.12
RAB40C-202ENST00000509637 ERP27Q96DN0 273 aa14.29□□□□□ -0.12
RAB40C-202ENST00000509637 ZNF382Q96SR6 550 aa14.29□□□□□ -0.12
RAB40C-202ENST00000509637 MED18Q9BUE0 208 aa14.29□□□□□ -0.12
RAB40C-202ENST00000509637 GLIPR2Q9H4G4 154 aa14.29□□□□□ -0.12
RAB40C-202ENST00000509637 PPP4R1LQ9P1A2 415 aa14.29□□□□□ -0.12
RAB40C-202ENST00000509637 CLEC4AQ9UMR7 237 aa14.29□□□□□ -0.12
RAB40C-202ENST00000509637 C19orf53Q9UNZ5 99 aaPredicted RBP14.29□□□□□ -0.12
RAB40C-202ENST00000509637 FREM1Q5H8C1 2179 aa14.29□□□□□ -0.12
RAB40C-202ENST00000509637 H3BML4 177 aa14.28□□□□□ -0.12
RAB40C-202ENST00000509637 C16orf97H3BN30 126 aa14.28□□□□□ -0.12
RAB40C-202ENST00000509637 GMFGO60234 142 aa14.28□□□□□ -0.12
RAB40C-202ENST00000509637 BCAS2O75934 225 aaPredicted RBP14.28□□□□□ -0.12
RAB40C-202ENST00000509637 OPN1LWP04000 364 aa14.28□□□□□ -0.12
RAB40C-202ENST00000509637 CD8BP10966 210 aa14.28□□□□□ -0.12
RAB40C-202ENST00000509637 HSD3B1P14060 373 aa14.28□□□□□ -0.12
RAB40C-202ENST00000509637 HSD3B2P26439 372 aa14.28□□□□□ -0.12
RAB40C-202ENST00000509637 HIVEP2P31629 2446 aa14.28□□□□□ -0.12
RAB40C-202ENST00000509637 PTH2RP49190 550 aa14.28□□□□□ -0.12
RAB40C-202ENST00000509637 EEF1A1P68104 462 aaKnown RBP14.28□□□□□ -0.12
RAB40C-202ENST00000509637 CSTF3Q12996 717 aaKnown RBP14.28□□□□□ -0.12
RAB40C-202ENST00000509637 CTU2Q2VPK5 515 aaKnown RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms