RNA–Protein interactions for RNA: ENST00000509384.5

LYSMD3-204, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 1,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-204ENST00000509384 MTHFD2LQ9H903 347 aaPredicted RBP11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 POLE3Q9NRF9 147 aa11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 VNN3Q9NY84 501 aa11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 PISDQ9UG56 409 aa11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 C3orf18Q9UK00 162 aa11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 SLC13A4Q9UKG4 626 aa11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 NXT1Q9UKK6 140 aaKnown RBP11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 CFL2Q9Y281 166 aa11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 SLC9A8Q9Y2E8 581 aa11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 IFT52Q9Y366 437 aa11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 SAMHD1Q9Y3Z3 626 aaKnown RBP11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 FAM32AQ9Y421 112 aaKnown RBP11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 B3GALT1Q9Y5Z6 326 aa11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 U3KQV3 271 aa11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 PRAMEF25A6NGN4 478 aa11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 EIF4E1BA6NMX2 242 aaKnown RBP11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 C9J4A7 227 aa11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 ADAMDEC1O15204 470 aa11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 KIAA0513O60268 411 aa11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 DPM1O60762 260 aa11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 ALOX12BO75342 701 aa11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 DNAJB5O75953 348 aa11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 KCNK2O95069 426 aa11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 IGKV3-11P04433 115 aa11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 CYC1P08574 325 aa11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 SLC5A2P31639 672 aa11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 DNAJA1P31689 397 aaKnown RBP11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 DCTP40126 519 aa11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 EMP2P54851 167 aa11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 SLC37A1P57057 533 aa11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 ROR2Q01974 943 aaKnown RBP11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 PUM1Q14671 1186 aaKnown RBP eCLIP11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 GPR68Q15743 365 aa11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 NNATQ16517 81 aa11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 RNF220Q5VTB9 566 aa11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 MRPL14Q6P1L8 145 aaKnown RBP11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 DHRS4L2Q6PKH6 230 aa11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 NPSR1Q6W5P4 371 aa11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 TSEN54Q7Z6J9 526 aaKnown RBP11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 ANKRD37Q7Z713 158 aa11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 GLRX5Q86SX6 157 aa11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 HIPK1Q86Z02 1210 aa11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 ZNF321PQ8N8H1 164 aa11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 OR52P1PQ8NH57 321 aa11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 VANGL1Q8TAA9 524 aaPredicted RBP11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 ZNF721Q8TF20 911 aa11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 SPSB2Q99619 263 aa11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 CRB3Q9BUF7 120 aa11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 RSPO3Q9BXY4 272 aaPredicted RBP11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 AMBRA1Q9C0C7 1298 aa11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 COPS7AQ9UBW8 275 aa11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 ZNF443Q9Y2A4 671 aaPredicted RBP11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 OR10H1Q9Y4A9 318 aa11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 TESMINQ9Y4I5 508 aa11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 ENPP4Q9Y6X5 453 aa11.7□□□□□ -0.54
LYSMD3-204ENST00000509384 CACNA1AO00555 2505 aa11.69□□□□□ -0.54
LYSMD3-204ENST00000509384 CCDC187A0A096LP49 1063 aa11.69□□□□□ -0.54
LYSMD3-204ENST00000509384 SYT5O00445 386 aa11.69□□□□□ -0.54
LYSMD3-204ENST00000509384 BRINP1O60477 761 aa11.69□□□□□ -0.54
LYSMD3-204ENST00000509384 CNOT3O75175 753 aaKnown RBP11.69□□□□□ -0.54
LYSMD3-204ENST00000509384 CDK4P11802 303 aa11.69□□□□□ -0.54
LYSMD3-204ENST00000509384 FPR1P21462 350 aa11.69□□□□□ -0.54
LYSMD3-204ENST00000509384 PRKAR1BP31321 381 aa11.69□□□□□ -0.54
LYSMD3-204ENST00000509384 RRM2P31350 389 aa11.69□□□□□ -0.54
LYSMD3-204ENST00000509384 YAP1P46937 504 aaKnown RBP11.69□□□□□ -0.54
LYSMD3-204ENST00000509384 RFX3P48380 749 aa11.69□□□□□ -0.54
LYSMD3-204ENST00000509384 ARHGDIAP52565 204 aa11.69□□□□□ -0.54
LYSMD3-204ENST00000509384 SPIBQ01892 262 aa11.69□□□□□ -0.54
LYSMD3-204ENST00000509384 PPP1R8Q12972 351 aaKnown RBP11.69□□□□□ -0.54
LYSMD3-204ENST00000509384 EIF3IQ13347 325 aaKnown RBP11.69□□□□□ -0.54
LYSMD3-204ENST00000509384 DYNC1I2Q13409 638 aaKnown RBP11.69□□□□□ -0.54
LYSMD3-204ENST00000509384 DAG1Q14118 895 aa11.69□□□□□ -0.54
LYSMD3-204ENST00000509384 LARS2Q15031 903 aaKnown RBP11.69□□□□□ -0.54
LYSMD3-204ENST00000509384 FLYWCH1Q4VC44 716 aa11.69□□□□□ -0.54
LYSMD3-204ENST00000509384 HES3Q5TGS1 186 aa11.69□□□□□ -0.54
LYSMD3-204ENST00000509384 BORAQ6PGQ7 559 aa11.69□□□□□ -0.54
LYSMD3-204ENST00000509384 SHQ1Q6PI26 577 aaKnown RBP11.69□□□□□ -0.54
LYSMD3-204ENST00000509384 TBPL2Q6SJ96 375 aa11.69□□□□□ -0.54
LYSMD3-204ENST00000509384 FAM198BQ6UWH4 519 aa11.69□□□□□ -0.54
LYSMD3-204ENST00000509384 CYP4Z1Q86W10 505 aa11.69□□□□□ -0.54
LYSMD3-204ENST00000509384 VRK2Q86Y07 508 aa11.69□□□□□ -0.54
LYSMD3-204ENST00000509384 MORN4Q8NDC4 146 aa11.69□□□□□ -0.54
LYSMD3-204ENST00000509384 DEFB124Q8NES8 71 aa11.69□□□□□ -0.54
LYSMD3-204ENST00000509384 PMM1Q92871 262 aa11.69□□□□□ -0.54
LYSMD3-204ENST00000509384 ZG16BQ96DA0 208 aa11.69□□□□□ -0.54
LYSMD3-204ENST00000509384 TAAR9Q96RI9 348 aa11.69□□□□□ -0.54
LYSMD3-204ENST00000509384 PIP5K1AQ99755 562 aa11.69□□□□□ -0.54
LYSMD3-204ENST00000509384 DDA1Q9BW61 102 aa11.69□□□□□ -0.54
LYSMD3-204ENST00000509384 SAP130Q9H0E3 1048 aa11.69□□□□□ -0.54
LYSMD3-204ENST00000509384 WDR54Q9H977 334 aa11.69□□□□□ -0.54
LYSMD3-204ENST00000509384 AKIRIN1Q9H9L7 192 aaPredicted RBP11.69□□□□□ -0.54
LYSMD3-204ENST00000509384 PAPOLBQ9NRJ5 636 aaKnown RBP11.69□□□□□ -0.54
LYSMD3-204ENST00000509384 ZNF232Q9UNY5 417 aa11.69□□□□□ -0.54
LYSMD3-204ENST00000509384 ASCC3Q8N3C0 2202 aaKnown RBP11.69□□□□□ -0.54
LYSMD3-204ENST00000509384 OTOGLQ3ZCN5 2332 aa11.68□□□□□ -0.54
LYSMD3-204ENST00000509384 AGAP5A6NIR3 686 aa11.68□□□□□ -0.54
LYSMD3-204ENST00000509384 SAGE2PA6NJ88 616 aa11.68□□□□□ -0.54
LYSMD3-204ENST00000509384 J3KTA2 159 aa11.68□□□□□ -0.54
LYSMD3-204ENST00000509384 M0R3H8 397 aa11.68□□□□□ -0.54
LYSMD3-204ENST00000509384 PLD2O14939 933 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms