RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 GPR17Q13304 367 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 DCAF4L1Q3SXM0 396 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 GTDC1Q4AE62 458 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 THEM4Q5T1C6 240 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 MBLAC2Q68D91 279 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 SV2AQ7L0J3 742 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 BIVMQ86UB2 503 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 WDR49Q8IV35 697 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 IGDCC3Q8IVU1 814 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 ZBTB8OSQ8IWT0 167 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 NRMQ8IXM6 262 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 LINC00518Q8N0U6 118 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 NECAP1Q8NC96 275 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 RAD51AP1Q96B01 352 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 ZNF641Q96N77 438 aaPredicted RBP3.68□□□□□ -1.82
NEDD4-209ENST00000508871 LMF1Q96S06 567 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 BDH2Q9BUT1 245 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 ZNF442Q9H7R0 627 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 AUNIPQ9H7T9 357 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 MLXIPLQ9NP71 852 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 CHST11Q9NPF2 352 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 CLN6Q9NWW5 311 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 IMPAD1Q9NX62 359 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 SLC7A7Q9UM01 511 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.68□□□□□ -1.82
NEDD4-209ENST00000508871 DAPL1A0PJW8 107 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 HDAC3O15379 428 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 ESRRBO95718 433 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 SLC16A8O95907 504 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 P04436 131 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 JUNP05412 331 aaKnown RBP3.68□□□□□ -1.82
NEDD4-209ENST00000508871 CHRM5P08912 532 aaPredicted RBP3.68□□□□□ -1.82
NEDD4-209ENST00000508871 TCP1P17987 556 aaKnown RBP3.68□□□□□ -1.82
NEDD4-209ENST00000508871 FSTP19883 344 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 MAKP20794 623 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 SLC11A1P49279 550 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 OR2B6P58173 313 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 HERV-K104P63124 156 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 RGS1Q08116 209 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 PRPSAP1Q14558 356 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 IDNKQ5T6J7 187 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 TMEM64Q6YI46 380 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 HIST2H3AQ71DI3 136 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 MRPL55Q7Z7F7 128 aaKnown RBP3.68□□□□□ -1.82
NEDD4-209ENST00000508871 MEX3DQ86XN8 651 aaKnown RBP3.68□□□□□ -1.82
NEDD4-209ENST00000508871 SVOPQ8N4V2 548 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 RNF148Q8N7C7 305 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 HJURPQ8NCD3 748 aaPredicted RBP3.68□□□□□ -1.82
NEDD4-209ENST00000508871 OR4D10Q8NGI6 311 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 PAQR8Q8TEZ7 354 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 EID2BQ96D98 161 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 C16orf92Q96LL3 132 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 LRFN5Q96NI6 719 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 ZFP3Q96NJ6 502 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 GPR78Q96P69 363 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 APOOQ9BUR5 198 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 VN1R3Q9BXE9 311 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 GPR87Q9BY21 358 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 MAGT1Q9H0U3 335 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 CDT1Q9H211 546 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 LRMDAQ9H2I8 198 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 CRISPLD1Q9H336 500 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 MIOXQ9UGB7 285 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 RCE1Q9Y256 329 aa3.68□□□□□ -1.82
NEDD4-209ENST00000508871 OR2AT4A6NND4 320 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 ADAM23O75077 832 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 SUPT3HO75486 399 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 RCBTB2O95199 551 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 ANKRD34CP0C6C1 535 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 COX4I1P13073 169 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 INSRRP14616 1297 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 PSMB4P28070 264 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 CRHR1P34998 444 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 MRPL19P49406 292 aaKnown RBP3.67□□□□□ -1.82
NEDD4-209ENST00000508871 CLCNKAP51800 687 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 E2F1Q01094 437 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 MEF2AQ02078 507 aaPredicted RBP3.67□□□□□ -1.82
NEDD4-209ENST00000508871 GUCY2DQ02846 1103 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 DLX2Q07687 328 aaPredicted RBP3.67□□□□□ -1.82
NEDD4-209ENST00000508871 HEPACAMQ14CZ8 416 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 INPP5JQ15735 1006 aaPredicted RBP3.67□□□□□ -1.82
NEDD4-209ENST00000508871 PLAC9Q5JTB6 97 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 CDKL4Q5MAI5 379 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 OTUD3Q5T2D3 398 aaPredicted RBP3.67□□□□□ -1.82
NEDD4-209ENST00000508871 ASPHD2Q6ICH7 369 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 C15orf39Q6ZRI6 1047 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 HORMAD2Q8N7B1 307 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 OR4A4PQ8NGN8 299 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 NETO1Q8TDF5 533 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 UHRF2Q96PU4 802 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 OR1F2PQ96R84 312 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 CPNE1Q99829 537 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 PTPN18Q99952 460 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 NUDT22Q9BRQ3 303 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 KATNBL1Q9H079 304 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 MED20Q9H944 212 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 HHATLQ9HCP6 504 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 RGS18Q9NS28 235 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 OLAHQ9NV23 265 aa3.67□□□□□ -1.82
NEDD4-209ENST00000508871 HECAQ9UBI9 543 aaPredicted RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms