RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 PDLIM3Q53GG5 364 aaPredicted RBP8.41□□□□□ -1.06
NEDD9-211ENST00000508546 CCNYL2Q5T2Q4 361 aa8.41□□□□□ -1.06
NEDD9-211ENST00000508546 C6orf52Q5T4I8 152 aa8.41□□□□□ -1.06
NEDD9-211ENST00000508546 RAET1LQ5VY80 246 aa8.41□□□□□ -1.06
NEDD9-211ENST00000508546 BEND4Q6ZU67 534 aa8.41□□□□□ -1.06
NEDD9-211ENST00000508546 CYS1Q717R9 158 aa8.41□□□□□ -1.06
NEDD9-211ENST00000508546 LARP4Q71RC2 724 aaKnown RBP eCLIP8.41□□□□□ -1.06
NEDD9-211ENST00000508546 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.41□□□□□ -1.06
NEDD9-211ENST00000508546 PAGE2Q7Z2X7 111 aa8.41□□□□□ -1.06
NEDD9-211ENST00000508546 WFDC8Q8IUA0 241 aa8.41□□□□□ -1.06
NEDD9-211ENST00000508546 OR2M3Q8NG83 312 aa8.41□□□□□ -1.06
NEDD9-211ENST00000508546 RAB3IL1Q8TBN0 382 aa8.41□□□□□ -1.06
NEDD9-211ENST00000508546 ZNF675Q8TD23 568 aa8.41□□□□□ -1.06
NEDD9-211ENST00000508546 CDKL2Q92772 493 aa8.41□□□□□ -1.06
NEDD9-211ENST00000508546 GTPBP3Q969Y2 492 aaKnown RBP8.41□□□□□ -1.06
NEDD9-211ENST00000508546 ERP27Q96DN0 273 aa8.41□□□□□ -1.06
NEDD9-211ENST00000508546 GMPPAQ96IJ6 420 aaPredicted RBP8.41□□□□□ -1.06
NEDD9-211ENST00000508546 GRIP2Q9C0E4 1043 aa8.41□□□□□ -1.06
NEDD9-211ENST00000508546 ACTR6Q9GZN1 396 aa8.41□□□□□ -1.06
NEDD9-211ENST00000508546 DSN1Q9H410 356 aa8.41□□□□□ -1.06
NEDD9-211ENST00000508546 IPPKQ9H8X2 491 aa8.41□□□□□ -1.06
NEDD9-211ENST00000508546 LRTM1Q9HBL6 345 aa8.41□□□□□ -1.06
NEDD9-211ENST00000508546 BARX1Q9HBU1 254 aaPredicted RBP8.41□□□□□ -1.06
NEDD9-211ENST00000508546 AHSPQ9NZD4 102 aa8.41□□□□□ -1.06
NEDD9-211ENST00000508546 PPP4R1LQ9P1A2 415 aa8.41□□□□□ -1.06
NEDD9-211ENST00000508546 PSME2Q9UL46 239 aa8.41□□□□□ -1.06
NEDD9-211ENST00000508546 LIPT1Q9Y234 373 aa8.41□□□□□ -1.06
NEDD9-211ENST00000508546 ACOT9Q9Y305 439 aa8.41□□□□□ -1.06
NEDD9-211ENST00000508546 RNF11Q9Y3C5 154 aa8.41□□□□□ -1.06
NEDD9-211ENST00000508546 RNF115Q9Y4L5 304 aa8.41□□□□□ -1.06
NEDD9-211ENST00000508546 A0A096LNT2 108 aa8.4□□□□□ -1.06
NEDD9-211ENST00000508546 A0A0G2JK05 382 aa8.4□□□□□ -1.06
NEDD9-211ENST00000508546 H3BML4 177 aa8.4□□□□□ -1.06
NEDD9-211ENST00000508546 ADAM11O75078 769 aa8.4□□□□□ -1.06
NEDD9-211ENST00000508546 SS18L1O75177 396 aaPredicted RBP8.4□□□□□ -1.06
NEDD9-211ENST00000508546 ERAL1O75616 437 aaKnown RBP8.4□□□□□ -1.06
NEDD9-211ENST00000508546 SEC31AO94979 1220 aaKnown RBP8.4□□□□□ -1.06
NEDD9-211ENST00000508546 LTA4HP09960 611 aaKnown RBP8.4□□□□□ -1.06
NEDD9-211ENST00000508546 PCSK2P16519 638 aa8.4□□□□□ -1.06
NEDD9-211ENST00000508546 IL12BP29460 328 aa8.4□□□□□ -1.06
NEDD9-211ENST00000508546 EVI2BP34910 448 aa8.4□□□□□ -1.06
NEDD9-211ENST00000508546 KRT20P35900 424 aa8.4□□□□□ -1.06
NEDD9-211ENST00000508546 CDKN1AP38936 164 aa8.4□□□□□ -1.06
NEDD9-211ENST00000508546 PIK3CGP48736 1102 aa8.4□□□□□ -1.06
NEDD9-211ENST00000508546 MAPK12P53778 367 aa8.4□□□□□ -1.06
NEDD9-211ENST00000508546 ALDH18A1P54886 795 aaKnown RBP8.4□□□□□ -1.06
NEDD9-211ENST00000508546 CTBP2P56545 445 aa8.4□□□□□ -1.06
NEDD9-211ENST00000508546 DUSP2Q05923 314 aa8.4□□□□□ -1.06
NEDD9-211ENST00000508546 ZNF844Q08AG5 666 aa8.4□□□□□ -1.06
NEDD9-211ENST00000508546 C2orf54Q08AI8 447 aa8.4□□□□□ -1.06
NEDD9-211ENST00000508546 GTF2H2Q13888 395 aa8.4□□□□□ -1.06
NEDD9-211ENST00000508546 NCMAPQ5T1S8 102 aa8.4□□□□□ -1.06
NEDD9-211ENST00000508546 GTF2H2CQ6P1K8 395 aa8.4□□□□□ -1.06
NEDD9-211ENST00000508546 METTL2BQ6P1Q9 378 aaKnown RBP8.4□□□□□ -1.06
NEDD9-211ENST00000508546 TBC1D1Q86TI0 1168 aaPredicted RBP8.4□□□□□ -1.06
NEDD9-211ENST00000508546 ZBED8Q8IZ13 594 aa8.4□□□□□ -1.06
NEDD9-211ENST00000508546 METTL4Q8N3J2 472 aa8.4□□□□□ -1.06
NEDD9-211ENST00000508546 RHEBL1Q8TAI7 183 aa8.4□□□□□ -1.06
NEDD9-211ENST00000508546 SMAP2Q8WU79 429 aaPredicted RBP8.4□□□□□ -1.06
NEDD9-211ENST00000508546 KLHL29Q96CT2 875 aa8.4□□□□□ -1.06
NEDD9-211ENST00000508546 C11orf24Q96F05 449 aaPredicted RBP8.4□□□□□ -1.06
NEDD9-211ENST00000508546 CNRIP1Q96F85 164 aaPredicted RBP8.4□□□□□ -1.06
NEDD9-211ENST00000508546 VSTM2LQ96N03 204 aa8.4□□□□□ -1.06
NEDD9-211ENST00000508546 ZNF681Q96N22 645 aa8.4□□□□□ -1.06
NEDD9-211ENST00000508546 TACO1Q9BSH4 297 aaKnown RBP8.4□□□□□ -1.06
NEDD9-211ENST00000508546 MRPL1Q9BYD6 325 aaKnown RBP8.4□□□□□ -1.06
NEDD9-211ENST00000508546 ZBTB26Q9HCK0 441 aa8.4□□□□□ -1.06
NEDD9-211ENST00000508546 SDHAF3Q9NRP4 125 aa8.4□□□□□ -1.06
NEDD9-211ENST00000508546 GLRX2Q9NS18 164 aa8.4□□□□□ -1.06
NEDD9-211ENST00000508546 LPAR3Q9UBY5 353 aa8.4□□□□□ -1.06
NEDD9-211ENST00000508546 MAGED1Q9Y5V3 778 aaPredicted RBP8.4□□□□□ -1.06
NEDD9-211ENST00000508546 AP4B1Q9Y6B7 739 aa8.4□□□□□ -1.06
NEDD9-211ENST00000508546 NBEAL2Q6ZNJ1 2754 aa8.39□□□□□ -1.07
NEDD9-211ENST00000508546 A0A1W2PP18 115 aa8.39□□□□□ -1.07
NEDD9-211ENST00000508546 FAM159BA6NKW6 160 aa8.39□□□□□ -1.07
NEDD9-211ENST00000508546 C17orf51A8MQB3 221 aa8.39□□□□□ -1.07
NEDD9-211ENST00000508546 FADS1O60427 444 aa8.39□□□□□ -1.07
NEDD9-211ENST00000508546 CLDN9O95484 217 aa8.39□□□□□ -1.07
NEDD9-211ENST00000508546 CD3EP07766 207 aa8.39□□□□□ -1.07
NEDD9-211ENST00000508546 CRABP2P29373 138 aa8.39□□□□□ -1.07
NEDD9-211ENST00000508546 SSTR1P30872 391 aa8.39□□□□□ -1.07
NEDD9-211ENST00000508546 SPRP35270 261 aaPredicted RBP8.39□□□□□ -1.07
NEDD9-211ENST00000508546 CORO7P57737 925 aa8.39□□□□□ -1.07
NEDD9-211ENST00000508546 MRPS35P82673 323 aaKnown RBP8.39□□□□□ -1.07
NEDD9-211ENST00000508546 LTB4RQ15722 352 aa8.39□□□□□ -1.07
NEDD9-211ENST00000508546 SGCBQ16585 318 aa8.39□□□□□ -1.07
NEDD9-211ENST00000508546 PFKFB4Q16877 469 aa8.39□□□□□ -1.07
NEDD9-211ENST00000508546 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.39□□□□□ -1.07
NEDD9-211ENST00000508546 TMEM44Q2T9K0 475 aa8.39□□□□□ -1.07
NEDD9-211ENST00000508546 TMEM249Q2WGJ8 235 aa8.39□□□□□ -1.07
NEDD9-211ENST00000508546 PGGHGQ32M88 737 aa8.39□□□□□ -1.07
NEDD9-211ENST00000508546 ZNF672Q499Z4 452 aaPredicted RBP8.39□□□□□ -1.07
NEDD9-211ENST00000508546 ZNF628Q5EBL2 1059 aa8.39□□□□□ -1.07
NEDD9-211ENST00000508546 GRTP1Q5TC63 336 aa8.39□□□□□ -1.07
NEDD9-211ENST00000508546 FRG2Q64ET8 278 aa8.39□□□□□ -1.07
NEDD9-211ENST00000508546 HIST2H2BDQ6DRA6 164 aa8.39□□□□□ -1.07
NEDD9-211ENST00000508546 NPSR1Q6W5P4 371 aa8.39□□□□□ -1.07
NEDD9-211ENST00000508546 RAPH1Q70E73 1250 aa8.39□□□□□ -1.07
NEDD9-211ENST00000508546 GOLGA7Q7Z5G4 137 aa8.39□□□□□ -1.07
NEDD9-211ENST00000508546 CMC1Q7Z7K0 106 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms