RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 CLPTM1LQ96KA5 538 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 ZNF597Q96LX8 424 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 MGME1Q9BQP7 344 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 CLK4Q9HAZ1 481 aaKnown RBP2.79□□□□□ -1.96
NEDD4-208ENST00000508342 C1GALT1Q9NS00 363 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 TBC1D23Q9NUY8 699 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 FAIMQ9NVQ4 179 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 TAS2R3Q9NYW6 316 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 DAPK2Q9UIK4 370 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 PCDHGA1Q9Y5H4 931 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 EP400Q96L91 3159 aa2.79□□□□□ -1.96
NEDD4-208ENST00000508342 FIGNL2A6NMB9 653 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 FOXO6A8MYZ6 492 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 ZNF878C9JN71 531 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 H7BY64 318 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 M0R1B8 84 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 EFSO43281 561 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 GPRIN2O60269 458 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 CIDEAO60543 219 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 RPP14O95059 124 aaKnown RBP2.78□□□□□ -1.96
NEDD4-208ENST00000508342 WISP1O95388 367 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 SCGB1D1O95968 90 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 TACSTD2P09758 323 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 CD36P16671 472 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 ECHS1P30084 290 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 S100A7P31151 101 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 LSSP48449 732 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 OR1C1Q15619 314 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 NPY5RQ15761 445 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 IGFBP7Q16270 282 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 TEX30Q5JUR7 227 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 IL23RQ5VWK5 629 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 ADNP2Q6IQ32 1131 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 WDR93Q6P2C0 686 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 SMARCD3Q6STE5 483 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 NRROSQ86YC3 692 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 PDSS2Q86YH6 399 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 NIPA2Q8N8Q9 360 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 TP53I13Q8NBR0 393 aaPredicted RBP2.78□□□□□ -1.96
NEDD4-208ENST00000508342 TP53INP1Q96A56 240 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 KIAA1191Q96A73 305 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 PRAP1Q96NZ9 151 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 ALPK1Q96QP1 1244 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 DPH7Q9BTV6 452 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 DOHHQ9BU89 302 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 MED18Q9BUE0 208 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 EFCAB11Q9BUY7 163 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 HINT2Q9BX68 163 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 ACTRT3Q9BYD9 372 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 SLC19A3Q9BZV2 496 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 IL21Q9HBE4 155 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 ZBTB20Q9HC78 741 aaPredicted RBP2.78□□□□□ -1.96
NEDD4-208ENST00000508342 NANSQ9NR45 359 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 SLC7A8Q9UHI5 535 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 PCM1Q15154 2024 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 CROCCQ5TZA2 2017 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 OBSL1O75147 1896 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 UBFD1O14562 309 aaKnown RBP2.78□□□□□ -1.96
NEDD4-208ENST00000508342 PPM1DO15297 605 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 RIPK2O43353 540 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 SMPD2O60906 423 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 GABBR2O75899 941 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 WNT11O96014 354 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 ZNF883P0CG24 379 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 MPC1LP0DKB6 136 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 CD79AP11912 226 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 DRD2P14416 443 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 GRK5P34947 590 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 KIR2DL1P43626 348 aaPredicted RBP2.78□□□□□ -1.96
NEDD4-208ENST00000508342 PTDSS1P48651 473 aaKnown RBP2.78□□□□□ -1.96
NEDD4-208ENST00000508342 HSPA7P48741 367 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 KHKP50053 298 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 SH3BP2P78314 561 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 MPP1Q00013 466 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 REEP5Q00765 189 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 SLC10A1Q14973 349 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 SHEQ5VZ18 495 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 TXNRD3NBQ6F5E7 133 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 CORO6Q6QEF8 472 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 MEX3BQ6ZN04 569 aaKnown RBP2.78□□□□□ -1.96
NEDD4-208ENST00000508342 TECPR1Q7Z6L1 1165 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 LHFPL3Q86UP9 236 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 WFDC8Q8IUA0 241 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 THRSPQ92748 146 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 ADAD1Q96M93 576 aaKnown RBP2.78□□□□□ -1.96
NEDD4-208ENST00000508342 INSM2Q96T92 566 aaPredicted RBP2.78□□□□□ -1.96
NEDD4-208ENST00000508342 ITPAQ9BY32 194 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 FGF21Q9NSA1 209 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 THAP1Q9NVV9 213 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 NOCTQ9UK39 431 aaKnown RBP2.78□□□□□ -1.96
NEDD4-208ENST00000508342 ASB4Q9Y574 426 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 TDRD6O60522 2096 aaKnown RBP2.78□□□□□ -1.96
NEDD4-208ENST00000508342 ATG2AQ2TAZ0 1938 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 CCDC168Q8NDH2 2452 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 ALPK2Q86TB3 2170 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 WNK1Q9H4A3 2382 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 PLCE1Q9P212 2302 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 A0A0A6YYC8 382 aaPredicted RBP2.78□□□□□ -1.96
NEDD4-208ENST00000508342 LOC100506127A0A0U1RQW1 187 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 HTR3EA5X5Y0 456 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms