RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 C3orf14Q9HBI5 128 aa13.56□□□□□ -0.24
DDX41-208ENST00000507955 ADAP2Q9NPF8 381 aa13.56□□□□□ -0.24
DDX41-208ENST00000507955 NDRG2Q9UN36 371 aaKnown RBP13.56□□□□□ -0.24
DDX41-208ENST00000507955 MUC3AQ02505 3323 aa13.55□□□□□ -0.24
DDX41-208ENST00000507955 SH3D21A4FU49 640 aa13.55□□□□□ -0.24
DDX41-208ENST00000507955 LRRC72A6NJI9 287 aa13.55□□□□□ -0.24
DDX41-208ENST00000507955 H0YGG7 62 aa13.55□□□□□ -0.24
DDX41-208ENST00000507955 CYP7B1O75881 506 aa13.55□□□□□ -0.24
DDX41-208ENST00000507955 FUT1P19526 365 aa13.55□□□□□ -0.24
DDX41-208ENST00000507955 GPR4P46093 362 aa13.55□□□□□ -0.24
DDX41-208ENST00000507955 ARF3P61204 181 aaPredicted RBP13.55□□□□□ -0.24
DDX41-208ENST00000507955 SNAPC1Q16533 368 aa13.55□□□□□ -0.24
DDX41-208ENST00000507955 ZC3H14Q6PJT7 736 aaKnown RBP13.55□□□□□ -0.24
DDX41-208ENST00000507955 LRRC25Q8N386 305 aaPredicted RBP13.55□□□□□ -0.24
DDX41-208ENST00000507955 OR52P1PQ8NH57 321 aa13.55□□□□□ -0.24
DDX41-208ENST00000507955 TMEM203Q969S6 136 aa13.55□□□□□ -0.24
DDX41-208ENST00000507955 CRELD1Q96HD1 420 aa13.55□□□□□ -0.24
DDX41-208ENST00000507955 CTRCQ99895 268 aa13.55□□□□□ -0.24
DDX41-208ENST00000507955 BARHL1Q9BZE3 327 aa13.55□□□□□ -0.24
DDX41-208ENST00000507955 HHATLQ9HCP6 504 aa13.55□□□□□ -0.24
DDX41-208ENST00000507955 ZSCAN32Q9NX65 697 aa13.55□□□□□ -0.24
DDX41-208ENST00000507955 OR2W5A6NFC9 320 aa13.55□□□□□ -0.24
DDX41-208ENST00000507955 GKN3PP0CG01 181 aa13.55□□□□□ -0.24
DDX41-208ENST00000507955 PRG2P13727 222 aa13.55□□□□□ -0.24
DDX41-208ENST00000507955 RFX3P48380 749 aa13.55□□□□□ -0.24
DDX41-208ENST00000507955 SNRPGP62308 76 aaKnown RBP13.55□□□□□ -0.24
DDX41-208ENST00000507955 TNFRSF17Q02223 184 aa13.55□□□□□ -0.24
DDX41-208ENST00000507955 EXOSC7Q15024 291 aaKnown RBP13.55□□□□□ -0.24
DDX41-208ENST00000507955 SYT14P1Q58G82 188 aa13.55□□□□□ -0.24
DDX41-208ENST00000507955 ENTPD8Q5MY95 495 aa13.55□□□□□ -0.24
DDX41-208ENST00000507955 DEFB119Q8N690 84 aa13.55□□□□□ -0.24
DDX41-208ENST00000507955 SFXN5Q8TD22 340 aa13.55□□□□□ -0.24
DDX41-208ENST00000507955 RLN3Q8WXF3 142 aa13.55□□□□□ -0.24
DDX41-208ENST00000507955 CNPPD1Q9BV87 410 aa13.55□□□□□ -0.24
DDX41-208ENST00000507955 ACTRT3Q9BYD9 372 aa13.55□□□□□ -0.24
DDX41-208ENST00000507955 HRASLS2Q9NWW9 162 aa13.55□□□□□ -0.24
DDX41-208ENST00000507955 ENOPH1Q9UHY7 261 aa13.55□□□□□ -0.24
DDX41-208ENST00000507955 DAPP1Q9UN19 280 aa13.55□□□□□ -0.24
DDX41-208ENST00000507955 CYP8B1Q9UNU6 501 aa13.55□□□□□ -0.24
DDX41-208ENST00000507955 PEX16Q9Y5Y5 336 aa13.55□□□□□ -0.24
DDX41-208ENST00000507955 COL6A3P12111 3177 aa13.54□□□□□ -0.24
DDX41-208ENST00000507955 SMIM30A4D0T7 59 aa13.54□□□□□ -0.24
DDX41-208ENST00000507955 FAM170BA6NMN3 283 aa13.54□□□□□ -0.24
DDX41-208ENST00000507955 MPZL2O60487 215 aa13.54□□□□□ -0.24
DDX41-208ENST00000507955 MED26O95402 600 aa13.54□□□□□ -0.24
DDX41-208ENST00000507955 ETV6P41212 452 aa13.54□□□□□ -0.24
DDX41-208ENST00000507955 PCYT1AP49585 367 aa13.54□□□□□ -0.24
DDX41-208ENST00000507955 CEBPEQ15744 281 aa13.54□□□□□ -0.24
DDX41-208ENST00000507955 MAPK14Q16539 360 aa13.54□□□□□ -0.24
DDX41-208ENST00000507955 MFSD12Q6NUT3 480 aa13.54□□□□□ -0.24
DDX41-208ENST00000507955 SLC30A6Q6NXT4 461 aa13.54□□□□□ -0.24
DDX41-208ENST00000507955 C1orf94Q6P1W5 598 aa13.54□□□□□ -0.24
DDX41-208ENST00000507955 ZNF730Q6ZMV8 503 aa13.54□□□□□ -0.24
DDX41-208ENST00000507955 FRRS1Q6ZNA5 592 aa13.54□□□□□ -0.24
DDX41-208ENST00000507955 IL17RDQ8NFM7 739 aa13.54□□□□□ -0.24
DDX41-208ENST00000507955 OR4K14Q8NGD5 310 aa13.54□□□□□ -0.24
DDX41-208ENST00000507955 OR8J1Q8NGP2 316 aa13.54□□□□□ -0.24
DDX41-208ENST00000507955 TMEM255BQ8WV15 326 aa13.54□□□□□ -0.24
DDX41-208ENST00000507955 TM4SF19Q96DZ7 209 aa13.54□□□□□ -0.24
DDX41-208ENST00000507955 SPATA5L1Q9BVQ7 753 aa13.54□□□□□ -0.24
DDX41-208ENST00000507955 PINK1Q9BXM7 581 aa13.54□□□□□ -0.24
DDX41-208ENST00000507955 SLC13A4Q9UKG4 626 aa13.54□□□□□ -0.24
DDX41-208ENST00000507955 TBC1D24Q9ULP9 559 aa13.54□□□□□ -0.24
DDX41-208ENST00000507955 SYNDIG1LA6NDD5 238 aa13.54□□□□□ -0.24
DDX41-208ENST00000507955 SHISA7A6NL88 538 aa13.54□□□□□ -0.24
DDX41-208ENST00000507955 CCRL2O00421 344 aa13.54□□□□□ -0.24
DDX41-208ENST00000507955 FGF17O60258 216 aa13.54□□□□□ -0.24
DDX41-208ENST00000507955 ETV5P41161 510 aa13.54□□□□□ -0.24
DDX41-208ENST00000507955 ETV1P50549 477 aa13.54□□□□□ -0.24
DDX41-208ENST00000507955 FLYWCH1Q4VC44 716 aa13.54□□□□□ -0.24
DDX41-208ENST00000507955 ZMAT1Q5H9K5 638 aa13.54□□□□□ -0.24
DDX41-208ENST00000507955 MFSD4BQ5TF39 518 aa13.54□□□□□ -0.24
DDX41-208ENST00000507955 OR2G6Q5TZ20 316 aa13.54□□□□□ -0.24
DDX41-208ENST00000507955 LIPKQ5VXJ0 399 aa13.54□□□□□ -0.24
DDX41-208ENST00000507955 B3GLCTQ6Y288 498 aa13.54□□□□□ -0.24
DDX41-208ENST00000507955 USP30Q70CQ3 517 aa13.54□□□□□ -0.24
DDX41-208ENST00000507955 EFHD2Q96C19 240 aaPredicted RBP13.54□□□□□ -0.24
DDX41-208ENST00000507955 TMEM80Q96HE8 168 aa13.54□□□□□ -0.24
DDX41-208ENST00000507955 SAP130Q9H0E3 1048 aa13.54□□□□□ -0.24
DDX41-208ENST00000507955 TPK1Q9H3S4 243 aa13.54□□□□□ -0.24
DDX41-208ENST00000507955 WDR70Q9NW82 654 aa13.54□□□□□ -0.24
DDX41-208ENST00000507955 CNOT2Q9NZN8 540 aaKnown RBP13.54□□□□□ -0.24
DDX41-208ENST00000507955 CPNE7Q9UBL6 633 aa13.54□□□□□ -0.24
DDX41-208ENST00000507955 PCOLCE2Q9UKZ9 415 aa13.54□□□□□ -0.24
DDX41-208ENST00000507955 YARS2Q9Y2Z4 477 aaKnown RBP13.54□□□□□ -0.24
DDX41-208ENST00000507955 LSM2Q9Y333 95 aaKnown RBP13.54□□□□□ -0.24
DDX41-208ENST00000507955 C2CD4DB7Z1M9 353 aa13.53□□□□□ -0.24
DDX41-208ENST00000507955 APBB3O95704 486 aa13.53□□□□□ -0.24
DDX41-208ENST00000507955 CCNYL3P0C7X3 344 aa13.53□□□□□ -0.24
DDX41-208ENST00000507955 RPS19P39019 145 aaKnown RBP13.53□□□□□ -0.24
DDX41-208ENST00000507955 CD79BP40259 229 aa13.53□□□□□ -0.24
DDX41-208ENST00000507955 RGS8P57771 180 aaPredicted RBP13.53□□□□□ -0.24
DDX41-208ENST00000507955 SMIM11AP58511 58 aa13.53□□□□□ -0.24
DDX41-208ENST00000507955 SHC2P98077 582 aa13.53□□□□□ -0.24
DDX41-208ENST00000507955 FAM92BQ6ZTR7 304 aa13.53□□□□□ -0.24
DDX41-208ENST00000507955 GALNT12Q8IXK2 581 aa13.53□□□□□ -0.24
DDX41-208ENST00000507955 SLC37A2Q8TED4 501 aa13.53□□□□□ -0.24
DDX41-208ENST00000507955 DIO2Q92813 273 aa13.53□□□□□ -0.24
DDX41-208ENST00000507955 NUAK2Q9H093 628 aa13.53□□□□□ -0.24
DDX41-208ENST00000507955 FAM60AQ9NP50 221 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms