RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 ALDOAP04075 364 aaKnown RBP7.44□□□□□ -1.22
SCN1A-207ENST00000507401 GSNP06396 782 aa7.44□□□□□ -1.22
SCN1A-207ENST00000507401 RBP1P09455 135 aa7.44□□□□□ -1.22
SCN1A-207ENST00000507401 UMPSP11172 480 aa7.44□□□□□ -1.22
SCN1A-207ENST00000507401 IMPDH1P20839 514 aa7.44□□□□□ -1.22
SCN1A-207ENST00000507401 NME2P22392 152 aa7.44□□□□□ -1.22
SCN1A-207ENST00000507401 HIST1H1TP22492 207 aaPredicted RBP7.44□□□□□ -1.22
SCN1A-207ENST00000507401 CA7P43166 264 aa7.44□□□□□ -1.22
SCN1A-207ENST00000507401 CASP6P55212 293 aa7.44□□□□□ -1.22
SCN1A-207ENST00000507401 ALDH6A1Q02252 535 aaKnown RBP7.44□□□□□ -1.22
SCN1A-207ENST00000507401 STX4Q12846 297 aa7.44□□□□□ -1.22
SCN1A-207ENST00000507401 KCNJ8Q15842 424 aa7.44□□□□□ -1.22
SCN1A-207ENST00000507401 PFKFB4Q16877 469 aa7.44□□□□□ -1.22
SCN1A-207ENST00000507401 C10orf62Q5T681 223 aaPredicted RBP7.44□□□□□ -1.22
SCN1A-207ENST00000507401 KHDRBS2Q5VWX1 349 aaKnown RBP7.44□□□□□ -1.22
SCN1A-207ENST00000507401 OR4C11Q6IEV9 310 aa7.44□□□□□ -1.22
SCN1A-207ENST00000507401 ADNP2Q6IQ32 1131 aa7.44□□□□□ -1.22
SCN1A-207ENST00000507401 GRHL2Q6ISB3 625 aa7.44□□□□□ -1.22
SCN1A-207ENST00000507401 DNAJC14Q6Y2X3 702 aaPredicted RBP7.44□□□□□ -1.22
SCN1A-207ENST00000507401 GALNTL5Q7Z4T8 443 aa7.44□□□□□ -1.22
SCN1A-207ENST00000507401 AKAP14Q86UN6 197 aa7.44□□□□□ -1.22
SCN1A-207ENST00000507401 ZNF227Q86WZ6 799 aa7.44□□□□□ -1.22
SCN1A-207ENST00000507401 GPALPP1Q8IXQ4 340 aa7.44□□□□□ -1.22
SCN1A-207ENST00000507401 TMCO5AQ8N6Q1 288 aa7.44□□□□□ -1.22
SCN1A-207ENST00000507401 TMEM52Q8NDY8 209 aa7.44□□□□□ -1.22
SCN1A-207ENST00000507401 OR8K3Q8NH51 312 aa7.44□□□□□ -1.22
SCN1A-207ENST00000507401 OR14A16Q8NHC5 309 aa7.44□□□□□ -1.22
SCN1A-207ENST00000507401 KCTD4Q8WVF5 259 aa7.44□□□□□ -1.22
SCN1A-207ENST00000507401 DAZLQ92904 295 aaKnown RBP7.44□□□□□ -1.22
SCN1A-207ENST00000507401 TMEM125Q96AQ2 219 aa7.44□□□□□ -1.22
SCN1A-207ENST00000507401 RGMAQ96B86 450 aa7.44□□□□□ -1.22
SCN1A-207ENST00000507401 ROPN1LQ96C74 230 aa7.44□□□□□ -1.22
SCN1A-207ENST00000507401 REPS1Q96D71 796 aa7.44□□□□□ -1.22
SCN1A-207ENST00000507401 GPR137Q96N19 417 aa7.44□□□□□ -1.22
SCN1A-207ENST00000507401 EBF4Q9BQW3 602 aa7.44□□□□□ -1.22
SCN1A-207ENST00000507401 ALOXE3Q9BYJ1 711 aa7.44□□□□□ -1.22
SCN1A-207ENST00000507401 SAP130Q9H0E3 1048 aa7.44□□□□□ -1.22
SCN1A-207ENST00000507401 SNX15Q9NRS6 342 aa7.44□□□□□ -1.22
SCN1A-207ENST00000507401 PNO1Q9NRX1 252 aaKnown RBP7.44□□□□□ -1.22
SCN1A-207ENST00000507401 ANKRD10Q9NXR5 420 aa7.44□□□□□ -1.22
SCN1A-207ENST00000507401 PPT2Q9UMR5 302 aa7.44□□□□□ -1.22
SCN1A-207ENST00000507401 ZNF835Q9Y2P0 537 aa7.44□□□□□ -1.22
SCN1A-207ENST00000507401 ASB1Q9Y576 335 aa7.44□□□□□ -1.22
SCN1A-207ENST00000507401 CLCA3PQ9Y6N3 262 aa7.44□□□□□ -1.22
SCN1A-207ENST00000507401 A3GALT2U3KPV4 340 aa7.44□□□□□ -1.22
SCN1A-207ENST00000507401 ITPR2Q14571 2701 aa7.44□□□□□ -1.22
SCN1A-207ENST00000507401 DIDO1Q9BTC0 2240 aaKnown RBP7.44□□□□□ -1.22
SCN1A-207ENST00000507401 NBPF19A0A087WUL8 3843 aa7.44□□□□□ -1.22
SCN1A-207ENST00000507401 CRYBG3Q68DQ2 2970 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 TRBV11-1A0A0K0K1C0 115 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 A1L4Q6 167 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 A8MUA0 341 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 FOXE1O00358 373 aaPredicted RBP7.43□□□□□ -1.22
SCN1A-207ENST00000507401 ASNA1O43681 348 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 TRIM13O60858 407 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 ITGA10O75578 1167 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 SLC25A12O75746 678 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 HSPA4LO95757 839 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 PTTG1O95997 202 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 TGFB1P01137 390 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 KITP10721 976 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 GFAPP14136 432 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 TNNI3P19429 210 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 CERS1P27544 350 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 TLX1P31314 330 aaPredicted RBP7.43□□□□□ -1.22
SCN1A-207ENST00000507401 MAGEA12P43365 314 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 ATP4BP51164 291 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 KCNK10P57789 538 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 GNG2P59768 71 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 IGLV3-21P80748 117 aaPredicted RBP7.43□□□□□ -1.22
SCN1A-207ENST00000507401 MERTKQ12866 999 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 SLAMF1Q13291 335 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 BMPR2Q13873 1038 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 RAB39AQ14964 217 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 MAPKAPK3Q16644 382 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 ZNF181Q2M3W8 571 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 ANKDD1AQ495B1 522 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 SLC36A3Q495N2 470 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 COQ5Q5HYK3 327 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 C1QL3Q5VWW1 255 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 HSDL2Q6YN16 418 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 ZNF793Q6ZN11 406 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 Q6ZPB1 254 aaPredicted RBP7.43□□□□□ -1.22
SCN1A-207ENST00000507401 PLEKHG7Q6ZR37 379 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.43□□□□□ -1.22
SCN1A-207ENST00000507401 FJX1Q86VR8 437 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 SPPL2CQ8IUH8 684 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 SIAH3Q8IW03 269 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 LILRA2Q8N149 483 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 PARP8Q8N3A8 854 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 ZCCHC7Q8N3Z6 543 aaKnown RBP7.43□□□□□ -1.22
SCN1A-207ENST00000507401 GALNT4Q8N4A0 578 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 TMEM156Q8N614 296 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 L3MBTL4Q8NA19 623 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 FAM47BQ8NA70 645 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 SIMC1Q8NDZ2 872 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 OR5L2Q8NGL0 311 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 C16orf52Q8NHV5 167 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 HUS1BQ8NHY5 278 aa7.43□□□□□ -1.22
SCN1A-207ENST00000507401 PTPMT1Q8WUK0 201 aaPredicted RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms