RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 EHFQ9NZC4 300 aa2.02□□□□□ -2.09
GYPB-207ENST00000506679 KLRF1Q9NZS2 232 aa2.02□□□□□ -2.09
GYPB-207ENST00000506679 NYAP2Q9P242 653 aa2.02□□□□□ -2.09
GYPB-207ENST00000506679 FKBP7Q9Y680 259 aa2.02□□□□□ -2.09
GYPB-207ENST00000506679 COL16A1Q07092 1604 aaPredicted RBP2.02□□□□□ -2.09
GYPB-207ENST00000506679 GRIN2DO15399 1336 aa2.01□□□□□ -2.09
GYPB-207ENST00000506679 TTC26A0AVF1 554 aa2.01□□□□□ -2.09
GYPB-207ENST00000506679 ZFP92A6NM28 416 aa2.01□□□□□ -2.09
GYPB-207ENST00000506679 B4DXG7 233 aa2.01□□□□□ -2.09
GYPB-207ENST00000506679 H0YL77 283 aa2.01□□□□□ -2.09
GYPB-207ENST00000506679 VDRP11473 427 aa2.01□□□□□ -2.09
GYPB-207ENST00000506679 ACVR1BP36896 505 aa2.01□□□□□ -2.09
GYPB-207ENST00000506679 EFNA3P52797 238 aa2.01□□□□□ -2.09
GYPB-207ENST00000506679 PRKCEQ02156 737 aa2.01□□□□□ -2.09
GYPB-207ENST00000506679 PUDPQ08623 228 aa2.01□□□□□ -2.09
GYPB-207ENST00000506679 SERTAD2Q14140 314 aa2.01□□□□□ -2.09
GYPB-207ENST00000506679 DPYSL3Q14195 570 aa2.01□□□□□ -2.09
GYPB-207ENST00000506679 SBK1Q52WX2 424 aa2.01□□□□□ -2.09
GYPB-207ENST00000506679 OR6B2Q6IFH4 312 aa2.01□□□□□ -2.09
GYPB-207ENST00000506679 STAC2Q6ZMT1 411 aa2.01□□□□□ -2.09
GYPB-207ENST00000506679 P4HA3Q7Z4N8 544 aa2.01□□□□□ -2.09
GYPB-207ENST00000506679 VPS36Q86VN1 386 aa2.01□□□□□ -2.09
GYPB-207ENST00000506679 ZNF677Q86XU0 584 aa2.01□□□□□ -2.09
GYPB-207ENST00000506679 KRTAP11-1Q8IUC1 163 aa2.01□□□□□ -2.09
GYPB-207ENST00000506679 CENPSQ8N2Z9 138 aa2.01□□□□□ -2.09
GYPB-207ENST00000506679 Q8N7P7 452 aa2.01□□□□□ -2.09
GYPB-207ENST00000506679 MRPL43Q8N983 215 aaKnown RBP2.01□□□□□ -2.09
GYPB-207ENST00000506679 NEK11Q8NG66 645 aa2.01□□□□□ -2.09
GYPB-207ENST00000506679 LINC01006Q8NI28 216 aa2.01□□□□□ -2.09
GYPB-207ENST00000506679 MGARPQ8TDB4 240 aa2.01□□□□□ -2.09
GYPB-207ENST00000506679 NUS1Q96E22 293 aa2.01□□□□□ -2.09
GYPB-207ENST00000506679 NSMCE2Q96MF7 247 aa2.01□□□□□ -2.09
GYPB-207ENST00000506679 SPXQ9BT56 116 aa2.01□□□□□ -2.09
GYPB-207ENST00000506679 ABCG8Q9H221 673 aa2.01□□□□□ -2.09
GYPB-207ENST00000506679 DUS2Q9NX74 493 aaKnown RBP2.01□□□□□ -2.09
GYPB-207ENST00000506679 ELOVL2Q9NXB9 296 aa2.01□□□□□ -2.09
GYPB-207ENST00000506679 IL17CQ9P0M4 197 aa2.01□□□□□ -2.09
GYPB-207ENST00000506679 P2RX2Q9UBL9 471 aa2.01□□□□□ -2.09
GYPB-207ENST00000506679 GHRLQ9UBU3 117 aa2.01□□□□□ -2.09
GYPB-207ENST00000506679 KLHL21Q9UJP4 597 aa2.01□□□□□ -2.09
GYPB-207ENST00000506679 DUSP12Q9UNI6 340 aa2.01□□□□□ -2.09
GYPB-207ENST00000506679 FLVCR1Q9Y5Y0 555 aa2.01□□□□□ -2.09
GYPB-207ENST00000506679 CHD4Q14839 1912 aa2.01□□□□□ -2.09
GYPB-207ENST00000506679 OBSCNQ5VST9 7968 aa2□□□□□ -2.09
GYPB-207ENST00000506679 H3BTX0 84 aa2□□□□□ -2.09
GYPB-207ENST00000506679 SERF1AO75920 110 aa2□□□□□ -2.09
GYPB-207ENST00000506679 JCHAINP01591 159 aa2□□□□□ -2.09
GYPB-207ENST00000506679 IGHV3-23P01764 117 aa2□□□□□ -2.09
GYPB-207ENST00000506679 KRT6AP02538 564 aa2□□□□□ -2.09
GYPB-207ENST00000506679 KRT6BP04259 564 aa2□□□□□ -2.09
GYPB-207ENST00000506679 RALAP11233 206 aa2□□□□□ -2.09
GYPB-207ENST00000506679 ZBTB25P24278 435 aa2□□□□□ -2.09
GYPB-207ENST00000506679 KRT6CP48668 564 aa2□□□□□ -2.09
GYPB-207ENST00000506679 SRYQ05066 204 aa2□□□□□ -2.09
GYPB-207ENST00000506679 PDK1Q15118 436 aa2□□□□□ -2.09
GYPB-207ENST00000506679 CDKN3Q16667 212 aa2□□□□□ -2.09
GYPB-207ENST00000506679 CYP51A1Q16850 503 aa2□□□□□ -2.09
GYPB-207ENST00000506679 CCDC40Q4G0X9 1142 aa2□□□□□ -2.09
GYPB-207ENST00000506679 BEND6Q5SZJ8 279 aaPredicted RBP2□□□□□ -2.09
GYPB-207ENST00000506679 MEDAGQ5VYS4 303 aa2□□□□□ -2.09
GYPB-207ENST00000506679 ZNF544Q6NX49 715 aa2□□□□□ -2.09
GYPB-207ENST00000506679 TMEM184AQ6ZMB5 413 aa2□□□□□ -2.09
GYPB-207ENST00000506679 TMEM26Q6ZUK4 368 aa2□□□□□ -2.09
GYPB-207ENST00000506679 KRTAP5-2Q701N4 177 aa2□□□□□ -2.09
GYPB-207ENST00000506679 FAM9BQ8IZU0 186 aa2□□□□□ -2.09
GYPB-207ENST00000506679 CEND1Q8N111 149 aa2□□□□□ -2.09
GYPB-207ENST00000506679 KDM8Q8N371 416 aa2□□□□□ -2.09
GYPB-207ENST00000506679 FAM71CQ8NEG0 241 aa2□□□□□ -2.09
GYPB-207ENST00000506679 OR56B1Q8NGI3 324 aa2□□□□□ -2.09
GYPB-207ENST00000506679 ARNTL2Q8WYA1 636 aa2□□□□□ -2.09
GYPB-207ENST00000506679 MRPL38Q96DV4 380 aaKnown RBP2□□□□□ -2.09
GYPB-207ENST00000506679 C14orf79Q96F83 325 aa2□□□□□ -2.09
GYPB-207ENST00000506679 PHYHIPLQ96FC7 376 aa2□□□□□ -2.09
GYPB-207ENST00000506679 ZIM3Q96PE6 472 aa2□□□□□ -2.09
GYPB-207ENST00000506679 MAPKAP1Q9BPZ7 522 aa2□□□□□ -2.09
GYPB-207ENST00000506679 TMEM231Q9H6L2 316 aa2□□□□□ -2.09
GYPB-207ENST00000506679 DBNDD1Q9H9R9 158 aa2□□□□□ -2.09
GYPB-207ENST00000506679 TRPV5Q9NQA5 729 aa2□□□□□ -2.09
GYPB-207ENST00000506679 GALPQ9UBC7 116 aa2□□□□□ -2.09
GYPB-207ENST00000506679 SPASTQ9UBP0 616 aa2□□□□□ -2.09
GYPB-207ENST00000506679 CLIP2Q9UDT6 1046 aa2□□□□□ -2.09
GYPB-207ENST00000506679 L3MBTL1Q9Y468 752 aa2□□□□□ -2.09
GYPB-207ENST00000506679 USP6P35125 1406 aa2□□□□□ -2.09
GYPB-207ENST00000506679 RPGRIP1LQ68CZ1 1315 aa1.99□□□□□ -2.09
GYPB-207ENST00000506679 A0A1W2PNU3 283 aaPredicted RBP1.99□□□□□ -2.09
GYPB-207ENST00000506679 K7ENP7 123 aa1.99□□□□□ -2.09
GYPB-207ENST00000506679 SSX5O60225 188 aa1.99□□□□□ -2.09
GYPB-207ENST00000506679 NOL4O94818 638 aa1.99□□□□□ -2.09
GYPB-207ENST00000506679 HSPB1P04792 205 aaKnown RBP1.99□□□□□ -2.09
GYPB-207ENST00000506679 IGFBP1P08833 259 aaPredicted RBP1.99□□□□□ -2.09
GYPB-207ENST00000506679 ELK1P19419 428 aa1.99□□□□□ -2.09
GYPB-207ENST00000506679 PTBP1P26599 531 aaKnown RBP eCLIP1.99□□□□□ -2.09
GYPB-207ENST00000506679 RPL4P36578 427 aaKnown RBP1.99□□□□□ -2.09
GYPB-207ENST00000506679 HTR5AP47898 357 aa1.99□□□□□ -2.09
GYPB-207ENST00000506679 TFDP1Q14186 410 aa1.99□□□□□ -2.09
GYPB-207ENST00000506679 DCAF4L1Q3SXM0 396 aa1.99□□□□□ -2.09
GYPB-207ENST00000506679 PAGE2BQ5JRK9 111 aa1.99□□□□□ -2.09
GYPB-207ENST00000506679 FAM120AOSQ5T036 256 aa1.99□□□□□ -2.09
GYPB-207ENST00000506679 METTL11BQ5VVY1 283 aa1.99□□□□□ -2.09
GYPB-207ENST00000506679 BTNL3Q6UXE8 466 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms