RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 UBFD1O14562 309 aaKnown RBP22.34■■□□□ 1.17
HERC4-212ENST00000505760 TGM6O95932 706 aa22.34■■□□□ 1.17
HERC4-212ENST00000505760 NTSP30990 170 aa22.34■■□□□ 1.17
HERC4-212ENST00000505760 CPOXP36551 454 aa22.34■■□□□ 1.17
HERC4-212ENST00000505760 FOXD4Q12950 439 aaPredicted RBP22.34■■□□□ 1.17
HERC4-212ENST00000505760 POU4F3Q15319 338 aa22.34■■□□□ 1.17
HERC4-212ENST00000505760 BCL2A1Q16548 175 aa22.34■■□□□ 1.17
HERC4-212ENST00000505760 CYP27C1Q4G0S4 372 aa22.34■■□□□ 1.17
HERC4-212ENST00000505760 UBQLNLQ8IYU4 475 aa22.34■■□□□ 1.17
HERC4-212ENST00000505760 DSN1Q9H410 356 aa22.34■■□□□ 1.17
HERC4-212ENST00000505760 PLEKHF2Q9H8W4 249 aa22.34■■□□□ 1.17
HERC4-212ENST00000505760 SDHAF3Q9NRP4 125 aa22.34■■□□□ 1.17
HERC4-212ENST00000505760 DDX18Q9NVP1 670 aaKnown RBP22.34■■□□□ 1.17
HERC4-212ENST00000505760 C19orf53Q9UNZ5 99 aaPredicted RBP22.34■■□□□ 1.17
HERC4-212ENST00000505760 POLR3HQ9Y535 204 aaPredicted RBP22.34■■□□□ 1.17
HERC4-212ENST00000505760 C17orf51A8MQB3 221 aa22.33■■□□□ 1.17
HERC4-212ENST00000505760 B4DXG7 233 aa22.33■■□□□ 1.17
HERC4-212ENST00000505760 CASKO14936 926 aa22.33■■□□□ 1.17
HERC4-212ENST00000505760 ATE1O95260 518 aa22.33■■□□□ 1.17
HERC4-212ENST00000505760 PEPDP12955 493 aa22.33■■□□□ 1.17
HERC4-212ENST00000505760 NAA20P61599 178 aa22.33■■□□□ 1.17
HERC4-212ENST00000505760 DECR1Q16698 335 aa22.33■■□□□ 1.17
HERC4-212ENST00000505760 PRSS53Q2L4Q9 553 aa22.33■■□□□ 1.17
HERC4-212ENST00000505760 DEFB113Q30KQ7 82 aa22.33■■□□□ 1.17
HERC4-212ENST00000505760 RAET1LQ5VY80 246 aa22.33■■□□□ 1.17
HERC4-212ENST00000505760 FAM71E1Q6IPT2 247 aa22.33■■□□□ 1.17
HERC4-212ENST00000505760 ZYG11AQ6WRX3 759 aa22.33■■□□□ 1.17
HERC4-212ENST00000505760 CEP112Q8N8E3 955 aa22.33■■□□□ 1.17
HERC4-212ENST00000505760 MYNNQ9NPC7 610 aa22.33■■□□□ 1.17
HERC4-212ENST00000505760 TAS2R7Q9NYW3 318 aa22.33■■□□□ 1.17
HERC4-212ENST00000505760 NDRG3Q9UGV2 375 aa22.33■■□□□ 1.17
HERC4-212ENST00000505760 EMCNQ9ULC0 261 aa22.33■■□□□ 1.17
HERC4-212ENST00000505760 ABCG2Q9UNQ0 655 aa22.33■■□□□ 1.17
HERC4-212ENST00000505760 A0A1W2PNV4 684 aa22.32■■□□□ 1.16
HERC4-212ENST00000505760 SLC22A20A6NK97 555 aa22.32■■□□□ 1.16
HERC4-212ENST00000505760 A8MXE2 369 aa22.32■■□□□ 1.16
HERC4-212ENST00000505760 G3V2L1 256 aa22.32■■□□□ 1.16
HERC4-212ENST00000505760 HCRTR2O43614 444 aa22.32■■□□□ 1.16
HERC4-212ENST00000505760 GLRA3O75311 464 aa22.32■■□□□ 1.16
HERC4-212ENST00000505760 FAM153BP0C7A2 387 aa22.32■■□□□ 1.16
HERC4-212ENST00000505760 HK1P19367 917 aa22.32■■□□□ 1.16
HERC4-212ENST00000505760 B3GALT5-AS1P59052 145 aa22.32■■□□□ 1.16
HERC4-212ENST00000505760 ADAM8P78325 824 aa22.32■■□□□ 1.16
HERC4-212ENST00000505760 STX5Q13190 355 aa22.32■■□□□ 1.16
HERC4-212ENST00000505760 ZNHIT3Q15649 155 aaPredicted RBP22.32■■□□□ 1.16
HERC4-212ENST00000505760 FAM153CQ494X1 144 aa22.32■■□□□ 1.16
HERC4-212ENST00000505760 CFAP157Q5JU67 520 aa22.32■■□□□ 1.16
HERC4-212ENST00000505760 OR2A2Q6IF42 318 aa22.32■■□□□ 1.16
HERC4-212ENST00000505760 MEIOBQ8N635 442 aa22.32■■□□□ 1.16
HERC4-212ENST00000505760 FADS6Q8N9I5 356 aa22.32■■□□□ 1.16
HERC4-212ENST00000505760 FAM76AQ8TAV0 307 aa22.32■■□□□ 1.16
HERC4-212ENST00000505760 MZB1Q8WU39 189 aa22.32■■□□□ 1.16
HERC4-212ENST00000505760 GLIPR2Q9H4G4 154 aa22.32■■□□□ 1.16
HERC4-212ENST00000505760 Q9N2J8 555 aa22.32■■□□□ 1.16
HERC4-212ENST00000505760 MED11Q9P086 117 aa22.32■■□□□ 1.16
HERC4-212ENST00000505760 MRTO4Q9UKD2 239 aaKnown RBP22.32■■□□□ 1.16
HERC4-212ENST00000505760 WBP11Q9Y2W2 641 aaKnown RBP22.32■■□□□ 1.16
HERC4-212ENST00000505760 PCNX3Q9H6A9 2034 aa22.31■■□□□ 1.16
HERC4-212ENST00000505760 TNFSF12-TNFSF13A0A0A6YY99 330 aa22.31■■□□□ 1.16
HERC4-212ENST00000505760 A0A1W2PPM1 405 aa22.31■■□□□ 1.16
HERC4-212ENST00000505760 H3BQF6 201 aa22.31■■□□□ 1.16
HERC4-212ENST00000505760 KIF2AO00139 706 aaPredicted RBP22.31■■□□□ 1.16
HERC4-212ENST00000505760 UPK1AO00322 258 aa22.31■■□□□ 1.16
HERC4-212ENST00000505760 FADS1O60427 444 aa22.31■■□□□ 1.16
HERC4-212ENST00000505760 TNFSF13O75888 250 aa22.31■■□□□ 1.16
HERC4-212ENST00000505760 SMNDC1O75940 238 aaKnown RBP eCLIP22.31■■□□□ 1.16
HERC4-212ENST00000505760 HRGP04196 525 aa22.31■■□□□ 1.16
HERC4-212ENST00000505760 CRHP06850 196 aa22.31■■□□□ 1.16
HERC4-212ENST00000505760 CLK3P49761 638 aaKnown RBP22.31■■□□□ 1.16
HERC4-212ENST00000505760 GANABQ14697 944 aaKnown RBP22.31■■□□□ 1.16
HERC4-212ENST00000505760 FRMD7Q6ZUT3 714 aa22.31■■□□□ 1.16
HERC4-212ENST00000505760 TRIM46Q7Z4K8 759 aa22.31■■□□□ 1.16
HERC4-212ENST00000505760 OR2L13Q8N349 312 aa22.31■■□□□ 1.16
HERC4-212ENST00000505760 CNEP1R1Q8N9A8 125 aa22.31■■□□□ 1.16
HERC4-212ENST00000505760 OR2M3Q8NG83 312 aa22.31■■□□□ 1.16
HERC4-212ENST00000505760 KIF18AQ8NI77 898 aa22.31■■□□□ 1.16
HERC4-212ENST00000505760 PUM2Q8TB72 1066 aaKnown RBP eCLIP22.31■■□□□ 1.16
HERC4-212ENST00000505760 AMDHD1Q96NU7 426 aa22.31■■□□□ 1.16
HERC4-212ENST00000505760 PTGES2Q9H7Z7 377 aa22.31■■□□□ 1.16
HERC4-212ENST00000505760 RRAGDQ9NQL2 400 aaPredicted RBP22.31■■□□□ 1.16
HERC4-212ENST00000505760 MSTNO14793 375 aa22.3■■□□□ 1.16
HERC4-212ENST00000505760 RSL1D1O76021 490 aaKnown RBP22.3■■□□□ 1.16
HERC4-212ENST00000505760 RFX3P48380 749 aa22.3■■□□□ 1.16
HERC4-212ENST00000505760 EEFSECP57772 596 aaKnown RBP22.3■■□□□ 1.16
HERC4-212ENST00000505760 NOXRED1Q6NXP6 359 aa22.3■■□□□ 1.16
HERC4-212ENST00000505760 SMPDL3BQ92485 455 aa22.3■■□□□ 1.16
HERC4-212ENST00000505760 ELP4Q96EB1 424 aa22.3■■□□□ 1.16
HERC4-212ENST00000505760 RHOXF2Q9BQY4 288 aa22.3■■□□□ 1.16
HERC4-212ENST00000505760 TXLNGYQ9BZA5 131 aa22.3■■□□□ 1.16
HERC4-212ENST00000505760 FAM120CQ9NX05 1096 aaKnown RBP22.3■■□□□ 1.16
HERC4-212ENST00000505760 FLRT3Q9NZU0 649 aa22.3■■□□□ 1.16
HERC4-212ENST00000505760 EIF3LQ9Y262 564 aaKnown RBP22.3■■□□□ 1.16
HERC4-212ENST00000505760 IL33O95760 270 aa22.29■■□□□ 1.16
HERC4-212ENST00000505760 PROCP04070 461 aa22.29■■□□□ 1.16
HERC4-212ENST00000505760 PSMD4P55036 377 aaKnown RBP22.29■■□□□ 1.16
HERC4-212ENST00000505760 KRTAP21-3Q3LHN1 58 aa22.29■■□□□ 1.16
HERC4-212ENST00000505760 CCDC153Q494R4 210 aa22.29■■□□□ 1.16
HERC4-212ENST00000505760 IKBIPQ70UQ0 350 aa22.29■■□□□ 1.16
HERC4-212ENST00000505760 DUSP19Q8WTR2 217 aa22.29■■□□□ 1.16
HERC4-212ENST00000505760 POM121Q96HA1 1249 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms