RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 NCF4Q15080 339 aa16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 WDR45BQ5MNZ6 344 aa16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 ZNF836Q6ZNA1 936 aa16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 MED25Q71SY5 747 aa16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 RNF113BQ8IZP6 322 aaKnown RBP16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 B3GNT7Q8NFL0 401 aa16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 OR5T3Q8NGG3 340 aa16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 OR9A4Q8NGU2 314 aa16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 TBC1D15Q8TC07 691 aa16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 MAP3K3Q99759 626 aa16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 TESQ9UGI8 421 aaKnown RBP16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 SLCO1B1Q9Y6L6 691 aa16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 CDH23Q9H251 3354 aa16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 TMEM131Q92545 1883 aa16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 A0A087WUU8 490 aa16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 DNAJB6O75190 326 aa16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 ZIC2O95409 532 aaPredicted RBP16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 TP53P04637 393 aaPredicted RBP16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 ZNF182P17025 639 aaPredicted RBP16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 GABRA4P48169 554 aa16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 GIPRP48546 466 aa16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 PCYT1AP49585 367 aa16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 HSD17B7P56937 341 aa16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 C21orf59P57076 290 aa16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 TUBA1BP68363 451 aa16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 SERTAD2Q14140 314 aa16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 DGUOKQ16854 277 aa16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 ZNF829Q3KNS6 432 aaPredicted RBP16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 TIMM50Q3ZCQ8 353 aa16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 MFSD4BQ5TF39 518 aa16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 TUBA1AQ71U36 451 aa16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 TMEM52Q8NDY8 209 aa16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 C1orf216Q8TAB5 229 aa16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 OSTF1Q92882 214 aa16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 BORCS5Q969J3 196 aa16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 HSPA12BQ96MM6 686 aa16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 SLC38A2Q96QD8 506 aa16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 QRSL1Q9H0R6 528 aaKnown RBP16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 ANKRA2Q9H9E1 313 aa16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 ERVMER34-1Q9H9K5 563 aa16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 MKLN1Q9UL63 735 aa16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 CHST2Q9Y4C5 530 aa16.1■□□□□ 0.17
TRAPPC11-204ENST00000505676 C5orf42Q9H799 3197 aa16.09■□□□□ 0.17
TRAPPC11-204ENST00000505676 BRINP1O60477 761 aa16.09■□□□□ 0.17
TRAPPC11-204ENST00000505676 ZBTB11O95625 1053 aaPredicted RBP16.09■□□□□ 0.17
TRAPPC11-204ENST00000505676 CD36P16671 472 aa16.09■□□□□ 0.17
TRAPPC11-204ENST00000505676 FUT4P22083 530 aa16.09■□□□□ 0.17
TRAPPC11-204ENST00000505676 PSMD4P55036 377 aaKnown RBP16.09■□□□□ 0.17
TRAPPC11-204ENST00000505676 GRM7Q14831 915 aa16.09■□□□□ 0.17
TRAPPC11-204ENST00000505676 TIGD6Q17RP2 521 aa16.09■□□□□ 0.17
TRAPPC11-204ENST00000505676 MBOAT2Q6ZWT7 520 aa16.09■□□□□ 0.17
TRAPPC11-204ENST00000505676 CYP4Z2PQ8N1L4 340 aa16.09■□□□□ 0.17
TRAPPC11-204ENST00000505676 GPR151Q8TDV0 419 aa16.09■□□□□ 0.17
TRAPPC11-204ENST00000505676 SLC41A3Q96GZ6 507 aa16.09■□□□□ 0.17
TRAPPC11-204ENST00000505676 RBM18Q96H35 190 aaKnown RBP16.09■□□□□ 0.17
TRAPPC11-204ENST00000505676 FOXQ1Q9C009 403 aa16.09■□□□□ 0.17
TRAPPC11-204ENST00000505676 C11orf16Q9NQ32 467 aa16.09■□□□□ 0.17
TRAPPC11-204ENST00000505676 MED17Q9NVC6 651 aa16.09■□□□□ 0.17
TRAPPC11-204ENST00000505676 GPR83Q9NYM4 423 aa16.09■□□□□ 0.17
TRAPPC11-204ENST00000505676 CACNA1IQ9P0X4 2223 aa16.09■□□□□ 0.17
TRAPPC11-204ENST00000505676 TRAPPC13A5PLN9 417 aa16.09■□□□□ 0.17
TRAPPC11-204ENST00000505676 RHPN2P1A8MT19 583 aa16.09■□□□□ 0.17
TRAPPC11-204ENST00000505676 M0R3G1 203 aa16.09■□□□□ 0.17
TRAPPC11-204ENST00000505676 UGT2B10P36537 528 aa16.09■□□□□ 0.17
TRAPPC11-204ENST00000505676 RHAGQ02094 409 aa16.09■□□□□ 0.17
TRAPPC11-204ENST00000505676 OCA2Q04671 838 aa16.09■□□□□ 0.17
TRAPPC11-204ENST00000505676 STX4Q12846 297 aa16.09■□□□□ 0.17
TRAPPC11-204ENST00000505676 ZNF155Q12901 538 aaPredicted RBP16.09■□□□□ 0.17
TRAPPC11-204ENST00000505676 TMEM236Q5W0B7 351 aa16.09■□□□□ 0.17
TRAPPC11-204ENST00000505676 SLC27A4Q6P1M0 643 aa16.09■□□□□ 0.17
TRAPPC11-204ENST00000505676 OLIG3Q7RTU3 272 aa16.09■□□□□ 0.17
TRAPPC11-204ENST00000505676 UBALD2Q8IYN6 164 aa16.09■□□□□ 0.17
TRAPPC11-204ENST00000505676 MVB12AQ96EY5 273 aa16.09■□□□□ 0.17
TRAPPC11-204ENST00000505676 RHNO1Q9BSD3 238 aa16.09■□□□□ 0.17
TRAPPC11-204ENST00000505676 MIR1-1HGQ9H1L0 117 aa16.09■□□□□ 0.17
TRAPPC11-204ENST00000505676 DUSP15Q9H1R2 295 aaPredicted RBP16.09■□□□□ 0.17
TRAPPC11-204ENST00000505676 PRTFDC1Q9NRG1 225 aa16.09■□□□□ 0.17
TRAPPC11-204ENST00000505676 SEMA4GQ9NTN9 838 aa16.09■□□□□ 0.17
TRAPPC11-204ENST00000505676 TMEM74BQ9NUR3 256 aa16.09■□□□□ 0.17
TRAPPC11-204ENST00000505676 RANBP2P49792 3224 aaKnown RBP16.08■□□□□ 0.16
TRAPPC11-204ENST00000505676 SYNDIG1LA6NDD5 238 aa16.08■□□□□ 0.16
TRAPPC11-204ENST00000505676 CPSF4LA6NMK7 179 aaKnown RBP16.08■□□□□ 0.16
TRAPPC11-204ENST00000505676 FOXS1O43638 330 aa16.08■□□□□ 0.16
TRAPPC11-204ENST00000505676 PIAS2O75928 621 aa16.08■□□□□ 0.16
TRAPPC11-204ENST00000505676 STSP08842 583 aa16.08■□□□□ 0.16
TRAPPC11-204ENST00000505676 ADORA3P0DMS8 318 aa16.08■□□□□ 0.16
TRAPPC11-204ENST00000505676 TNNI3P19429 210 aa16.08■□□□□ 0.16
TRAPPC11-204ENST00000505676 ID2Q02363 134 aa16.08■□□□□ 0.16
TRAPPC11-204ENST00000505676 SIX5Q8N196 739 aa16.08■□□□□ 0.16
TRAPPC11-204ENST00000505676 CLIP4Q8N3C7 705 aa16.08■□□□□ 0.16
TRAPPC11-204ENST00000505676 ZG16BQ96DA0 208 aa16.08■□□□□ 0.16
TRAPPC11-204ENST00000505676 PRAMEF2O60811 474 aa16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 SOX14O95416 240 aa16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 CBX7O95931 251 aa16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 LCKP06239 509 aa16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 C21orf33P30042 268 aaPredicted RBP16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 CSTF2P33240 577 aaKnown RBP eCLIP16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 TGFBR2P37173 567 aa16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 GPR3P46089 330 aa16.07■□□□□ 0.16
TRAPPC11-204ENST00000505676 OMPP47874 163 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms