RNA–Protein interactions for RNA: ENST00000504487.5

CCDC149-204, Transcript of coiled-coil domain containing 149, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC149, Length 3,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-204ENST00000504487 SLBPQ14493 270 aaKnown RBP eCLIP8.13□□□□□ -1.11
CCDC149-204ENST00000504487 SLC30A6Q6NXT4 461 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 PIGXQ8TBF5 258 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 RDH14Q9HBH5 336 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 NEU3Q9UQ49 428 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 TRBV23OR9-2A0A075B6M9 112 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 ANHXE9PGG2 379 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 SMAD9O15198 467 aaKnown RBP8.13□□□□□ -1.11
CCDC149-204ENST00000504487 PRAMEF12O95522 483 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 ECDO95905 644 aaPredicted RBP8.13□□□□□ -1.11
CCDC149-204ENST00000504487 HOXD9P28356 352 aaPredicted RBP8.13□□□□□ -1.11
CCDC149-204ENST00000504487 PTPN6P29350 595 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 MTAPQ13126 283 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 ADGRF1Q5T601 910 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 ACSM5Q6NUN0 579 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 PODNL1Q6PEZ8 512 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 TMEM17Q86X19 198 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 RBM45Q8IUH3 476 aaKnown RBP8.13□□□□□ -1.11
CCDC149-204ENST00000504487 FBXO15Q8NCQ5 510 aaPredicted RBP8.13□□□□□ -1.11
CCDC149-204ENST00000504487 OR5M3Q8NGP4 307 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 MARC2Q969Z3 335 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 RADILQ96JH8 1075 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 BHLHE41Q9C0J9 482 aaPredicted RBP8.13□□□□□ -1.11
CCDC149-204ENST00000504487 P2RY12Q9H244 342 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 ZNF768Q9H5H4 540 aaKnown RBP8.13□□□□□ -1.11
CCDC149-204ENST00000504487 EGLN3Q9H6Z9 239 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 WDR26Q9H7D7 661 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 PPP1R3EQ9H7J1 279 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 PRDM9Q9NQV7 894 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 CUEDC1Q9NWM3 386 aaPredicted RBP8.13□□□□□ -1.11
CCDC149-204ENST00000504487 TAS2R10Q9NYW0 307 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 PRELID3BQ9Y3B1 194 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 AP1M2Q9Y6Q5 423 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 TCRBV16S1A1N1A0A5B0 115 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 OR14I1A6ND48 311 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 ZNF98A6NK75 572 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 RNASET2O00584 256 aaKnown RBP8.13□□□□□ -1.11
CCDC149-204ENST00000504487 SDC3O75056 442 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 PEX14O75381 377 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 RASGRP1O95267 797 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 SOD2P04179 222 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 CA3P07451 260 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 HOXD4P09016 255 aaPredicted RBP8.13□□□□□ -1.11
CCDC149-204ENST00000504487 PTBP1P26599 531 aaKnown RBP eCLIP8.13□□□□□ -1.11
CCDC149-204ENST00000504487 SLC6A1P30531 599 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 SNRPD1P62314 119 aaKnown RBP8.13□□□□□ -1.11
CCDC149-204ENST00000504487 BAMBIQ13145 260 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 CCNJQ5T5M9 372 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 GPRC6AQ5T6X5 926 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 METTL11BQ5VVY1 283 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 Q6ZVU0 165 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 LINC00518Q8N0U6 118 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 TTLQ8NG68 377 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 LRRC46Q96FV0 321 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 MED18Q9BUE0 208 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 POLDIP3Q9BY77 421 aaKnown RBP8.13□□□□□ -1.11
CCDC149-204ENST00000504487 CNIH4Q9P003 139 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 MARK1Q9P0L2 795 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 RPS6KB2Q9UBS0 482 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 REV1Q9UBZ9 1251 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 STON1Q9Y6Q2 735 aa8.13□□□□□ -1.11
CCDC149-204ENST00000504487 NCOR1O75376 2440 aa8.12□□□□□ -1.11
CCDC149-204ENST00000504487 HEPACAM2A8MVW5 462 aa8.12□□□□□ -1.11
CCDC149-204ENST00000504487 SGCEO43556 437 aa8.12□□□□□ -1.11
CCDC149-204ENST00000504487 PIP5K1CO60331 668 aa8.12□□□□□ -1.11
CCDC149-204ENST00000504487 LDOC1O95751 146 aaPredicted RBP8.12□□□□□ -1.11
CCDC149-204ENST00000504487 IGHA2P01877 340 aa8.12□□□□□ -1.11
CCDC149-204ENST00000504487 MRPL3P09001 348 aaKnown RBP8.12□□□□□ -1.11
CCDC149-204ENST00000504487 CD9P21926 228 aa8.12□□□□□ -1.11
CCDC149-204ENST00000504487 ELAVL4P26378 380 aaKnown RBP8.12□□□□□ -1.11
CCDC149-204ENST00000504487 MAT2AP31153 395 aaKnown RBP8.12□□□□□ -1.11
CCDC149-204ENST00000504487 CAPZA2P47755 286 aa8.12□□□□□ -1.11
CCDC149-204ENST00000504487 VEGFCP49767 419 aa8.12□□□□□ -1.11
CCDC149-204ENST00000504487 WNT3P56703 355 aa8.12□□□□□ -1.11
CCDC149-204ENST00000504487 HTR4Q13639 388 aa8.12□□□□□ -1.11
CCDC149-204ENST00000504487 TPBGQ13641 420 aa8.12□□□□□ -1.11
CCDC149-204ENST00000504487 GK2Q14410 553 aaPredicted RBP8.12□□□□□ -1.11
CCDC149-204ENST00000504487 ZNF273Q14593 569 aa8.12□□□□□ -1.11
CCDC149-204ENST00000504487 ACBD7Q8N6N7 88 aa8.12□□□□□ -1.11
CCDC149-204ENST00000504487 CLRN3Q8NCR9 226 aa8.12□□□□□ -1.11
CCDC149-204ENST00000504487 TOE1Q96GM8 510 aaKnown RBP8.12□□□□□ -1.11
CCDC149-204ENST00000504487 RBP7Q96R05 134 aa8.12□□□□□ -1.11
CCDC149-204ENST00000504487 GDF15Q99988 308 aa8.12□□□□□ -1.11
CCDC149-204ENST00000504487 SLC12A9Q9BXP2 914 aa8.12□□□□□ -1.11
CCDC149-204ENST00000504487 KRCC1Q9NPI7 259 aaPredicted RBP8.12□□□□□ -1.11
CCDC149-204ENST00000504487 EQTNQ9NQ60 294 aa8.12□□□□□ -1.11
CCDC149-204ENST00000504487 EMC3Q9P0I2 261 aa8.12□□□□□ -1.11
CCDC149-204ENST00000504487 CSNK1G3Q9Y6M4 447 aa8.12□□□□□ -1.11
CCDC149-204ENST00000504487 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.12□□□□□ -1.11
CCDC149-204ENST00000504487 DPM1O60762 260 aa8.12□□□□□ -1.11
CCDC149-204ENST00000504487 SOD1P00441 154 aa8.12□□□□□ -1.11
CCDC149-204ENST00000504487 APOC1P02654 83 aa8.12□□□□□ -1.11
CCDC149-204ENST00000504487 RB1P06400 928 aa8.12□□□□□ -1.11
CCDC149-204ENST00000504487 IL3P08700 152 aa8.12□□□□□ -1.11
CCDC149-204ENST00000504487 RBMS1P29558 406 aaKnown RBP8.12□□□□□ -1.11
CCDC149-204ENST00000504487 CCR7P32248 378 aa8.12□□□□□ -1.11
CCDC149-204ENST00000504487 HNF1BP35680 557 aa8.12□□□□□ -1.11
CCDC149-204ENST00000504487 VIPR2P41587 438 aa8.12□□□□□ -1.11
CCDC149-204ENST00000504487 AP1S1P61966 158 aa8.12□□□□□ -1.11
CCDC149-204ENST00000504487 RIPPLY1Q0D2K3 151 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms