RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 C17orf105B2RV13 164 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 ARPC2O15144 300 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 C1QBP02746 253 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 MT-ND2P03891 347 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 AMHP03971 560 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 H2AFZP0C0S5 128 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 TFE3P19532 575 aaPredicted RBP5.93□□□□□ -1.46
CLCN3-204ENST00000504131 CHRNB4P30926 498 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 DCTDP32321 178 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 CEACAM3P40198 252 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 VAMP7P51809 220 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 RAB11AP62491 216 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 CDK6Q00534 326 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 CYBRD1Q53TN4 286 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 GCNT6Q5T4J0 391 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 CYP2R1Q6VVX0 501 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 H2AFVQ71UI9 128 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 GPR152Q8TDT2 470 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 RAB8BQ92930 207 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 DUS3LQ96G46 650 aaKnown RBP5.93□□□□□ -1.46
CLCN3-204ENST00000504131 RCC1LQ96I51 464 aaKnown RBP5.93□□□□□ -1.46
CLCN3-204ENST00000504131 RSPO3Q9BXY4 272 aaPredicted RBP5.93□□□□□ -1.46
CLCN3-204ENST00000504131 MFRPQ9BY79 579 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 ALG2Q9H553 416 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 VAT1LQ9HCJ6 419 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 SUSD2Q9UGT4 822 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 KCNG2Q9UJ96 466 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 SLC6A5Q9Y345 797 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 TULP4Q9NRJ4 1543 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 NWD1Q149M9 1564 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 TGIF2-C20orf24A0A0A6YYL0 155 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 C2orf78A6NCI8 922 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 CDRT15L2A8MXV6 281 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 ZNF37AP17032 561 aaPredicted RBP5.93□□□□□ -1.46
CLCN3-204ENST00000504131 EIF1AXP47813 144 aaKnown RBP5.93□□□□□ -1.46
CLCN3-204ENST00000504131 SLC6A8P48029 635 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 ARL4DP49703 201 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 PLAURQ03405 335 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 GPNMBQ14956 572 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 ZNF239Q16600 458 aaKnown RBP5.93□□□□□ -1.46
CLCN3-204ENST00000504131 KIAA1211LQ6NV74 962 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 TMPRSS11FQ6ZWK6 438 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 OR13C5Q8NGS8 318 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 SMPDL3AQ92484 453 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 HAS2Q92819 552 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 SLC35C1Q96A29 364 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 NSUN4Q96CB9 384 aaKnown RBP5.93□□□□□ -1.46
CLCN3-204ENST00000504131 EAF2Q96CJ1 260 aaPredicted RBP5.93□□□□□ -1.46
CLCN3-204ENST00000504131 ZNF599Q96NL3 588 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 PANX3Q96QZ0 392 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 ADI1Q9BV57 179 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 ZNF471Q9BX82 626 aaPredicted RBP5.93□□□□□ -1.46
CLCN3-204ENST00000504131 OR2J1Q9GZK6 312 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 NXF2Q9GZY0 626 aaKnown RBP5.93□□□□□ -1.46
CLCN3-204ENST00000504131 SAP130Q9H0E3 1048 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 ADAMTS10Q9H324 1103 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 SMOC1Q9H4F8 434 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 ZNF586Q9NXT0 402 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 AGO1Q9UL18 857 aaKnown RBP5.93□□□□□ -1.46
CLCN3-204ENST00000504131 HSF4Q9ULV5 492 aa5.93□□□□□ -1.46
CLCN3-204ENST00000504131 NRKQ7Z2Y5 1582 aa5.92□□□□□ -1.46
CLCN3-204ENST00000504131 IGSF1Q8N6C5 1336 aa5.92□□□□□ -1.46
CLCN3-204ENST00000504131 NRCAMQ92823 1304 aa5.92□□□□□ -1.46
CLCN3-204ENST00000504131 D6RAR5 112 aa5.92□□□□□ -1.46
CLCN3-204ENST00000504131 OR2T1O43869 369 aa5.92□□□□□ -1.46
CLCN3-204ENST00000504131 SIX6O95475 246 aa5.92□□□□□ -1.46
CLCN3-204ENST00000504131 NUDT17P0C025 328 aa5.92□□□□□ -1.46
CLCN3-204ENST00000504131 MYF6P23409 242 aa5.92□□□□□ -1.46
CLCN3-204ENST00000504131 RARRES1P49788 294 aa5.92□□□□□ -1.46
CLCN3-204ENST00000504131 ST8SIA6P61647 398 aa5.92□□□□□ -1.46
CLCN3-204ENST00000504131 HSF1Q00613 529 aa5.92□□□□□ -1.46
CLCN3-204ENST00000504131 IQCJQ1A5X6 159 aa5.92□□□□□ -1.46
CLCN3-204ENST00000504131 USP50Q70EL3 339 aaPredicted RBP5.92□□□□□ -1.46
CLCN3-204ENST00000504131 TP53I13Q8NBR0 393 aaPredicted RBP5.92□□□□□ -1.46
CLCN3-204ENST00000504131 CHDHQ8NE62 594 aaPredicted RBP5.92□□□□□ -1.46
CLCN3-204ENST00000504131 OR4N2Q8NGD1 307 aa5.92□□□□□ -1.46
CLCN3-204ENST00000504131 ADAMTS17Q8TE56 1095 aa5.92□□□□□ -1.46
CLCN3-204ENST00000504131 GPER1Q99527 375 aa5.92□□□□□ -1.46
CLCN3-204ENST00000504131 TTLL2Q9BWV7 592 aa5.92□□□□□ -1.46
CLCN3-204ENST00000504131 UGT2B28Q9BY64 529 aa5.92□□□□□ -1.46
CLCN3-204ENST00000504131 TBL1XR1Q9BZK7 514 aa5.92□□□□□ -1.46
CLCN3-204ENST00000504131 PCED1AQ9H1Q7 454 aa5.92□□□□□ -1.46
CLCN3-204ENST00000504131 CRISPLD1Q9H336 500 aa5.92□□□□□ -1.46
CLCN3-204ENST00000504131 KCNK4Q9NYG8 393 aa5.92□□□□□ -1.46
CLCN3-204ENST00000504131 KLHL21Q9UJP4 597 aa5.92□□□□□ -1.46
CLCN3-204ENST00000504131 PLEKHM1Q9Y4G2 1056 aa5.92□□□□□ -1.46
CLCN3-204ENST00000504131 AKAP12Q02952 1782 aa5.92□□□□□ -1.46
CLCN3-204ENST00000504131 HMX2A2RU54 273 aa5.92□□□□□ -1.46
CLCN3-204ENST00000504131 LINC00862A6NCI5 91 aa5.92□□□□□ -1.46
CLCN3-204ENST00000504131 GLSO94925 669 aaPredicted RBP5.92□□□□□ -1.46
CLCN3-204ENST00000504131 EBLN1P0CF75 366 aa5.92□□□□□ -1.46
CLCN3-204ENST00000504131 ADORA3P0DMS8 318 aa5.92□□□□□ -1.46
CLCN3-204ENST00000504131 HOXB3P14651 431 aaPredicted RBP5.92□□□□□ -1.46
CLCN3-204ENST00000504131 RAB9AP51151 201 aa5.92□□□□□ -1.46
CLCN3-204ENST00000504131 HTRA3P83110 453 aa5.92□□□□□ -1.46
CLCN3-204ENST00000504131 PMP22Q01453 160 aa5.92□□□□□ -1.46
CLCN3-204ENST00000504131 C1DQ13901 141 aaKnown RBP5.92□□□□□ -1.46
CLCN3-204ENST00000504131 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.92□□□□□ -1.46
CLCN3-204ENST00000504131 PIGGQ5H8A4 983 aa5.92□□□□□ -1.46
CLCN3-204ENST00000504131 CST9Q5W186 159 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms