RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 GUSBP1Q15486 140 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 PFKFB4Q16877 469 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 TMEM249Q2WGJ8 235 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 ZNF672Q499Z4 452 aaPredicted RBP10.44□□□□□ -0.74
CDK9-205ENST00000498339 SH2D4BQ5SQS7 431 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 ADAM5Q6NVV9 412 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 GTF2H2CQ6P1K8 395 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 CLEC2AQ6UVW9 174 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 GOLGA7Q7Z5G4 137 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 CMC1Q7Z7K0 106 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 ISCA2Q86U28 154 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 METTL25Q8N6Q8 603 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 FADS6Q8N9I5 356 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 STEAP2Q8NFT2 490 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 WDR20Q8TBZ3 569 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 ACTRT1Q8TDG2 376 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 S100PBPQ96BU1 408 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 GMPPAQ96IJ6 420 aaPredicted RBP10.44□□□□□ -0.74
CDK9-205ENST00000498339 BTBD9Q96Q07 612 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 CDK15Q96Q40 435 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 CPNE1Q99829 537 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 MCMBPQ9BTE3 642 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 TRIM31Q9BZY9 425 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 IPPKQ9H8X2 491 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 ANKRA2Q9H9E1 313 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 STOML1Q9UBI4 398 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 ZNF639Q9UID6 485 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 MCTS1Q9ULC4 181 aaKnown RBP10.44□□□□□ -0.74
CDK9-205ENST00000498339 GPR52Q9Y2T5 361 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 GPR55Q9Y2T6 319 aaPredicted RBP10.44□□□□□ -0.74
CDK9-205ENST00000498339 PCDHA9Q9Y5H5 950 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 SNX8Q9Y5X2 465 aa10.44□□□□□ -0.74
CDK9-205ENST00000498339 CXorf49A8MYA2 514 aaPredicted RBP10.43□□□□□ -0.74
CDK9-205ENST00000498339 SHISA8B8ZZ34 492 aa10.43□□□□□ -0.74
CDK9-205ENST00000498339 WIPF1O43516 503 aa10.43□□□□□ -0.74
CDK9-205ENST00000498339 NME6O75414 186 aaPredicted RBP10.43□□□□□ -0.74
CDK9-205ENST00000498339 BCAS2O75934 225 aaPredicted RBP10.43□□□□□ -0.74
CDK9-205ENST00000498339 LTA4HP09960 611 aaKnown RBP10.43□□□□□ -0.74
CDK9-205ENST00000498339 PNLIPRP2P54317 469 aa10.43□□□□□ -0.74
CDK9-205ENST00000498339 GAS1P54826 345 aa10.43□□□□□ -0.74
CDK9-205ENST00000498339 ZNF155Q12901 538 aaPredicted RBP10.43□□□□□ -0.74
CDK9-205ENST00000498339 DLG1Q12959 904 aa10.43□□□□□ -0.74
CDK9-205ENST00000498339 IFT88Q13099 833 aa10.43□□□□□ -0.74
CDK9-205ENST00000498339 TSC22D1Q15714 1073 aa10.43□□□□□ -0.74
CDK9-205ENST00000498339 ZKSCAN8Q15776 578 aaPredicted RBP10.43□□□□□ -0.74
CDK9-205ENST00000498339 NRF1Q16656 503 aa10.43□□□□□ -0.74
CDK9-205ENST00000498339 SGO1Q5FBB7 561 aa10.43□□□□□ -0.74
CDK9-205ENST00000498339 COMMD6Q7Z4G1 85 aa10.43□□□□□ -0.74
CDK9-205ENST00000498339 SLC44A2Q8IWA5 706 aaPredicted RBP10.43□□□□□ -0.74
CDK9-205ENST00000498339 CTAGE3PQ8IX95 158 aa10.43□□□□□ -0.74
CDK9-205ENST00000498339 KLHL7Q8IXQ5 586 aa10.43□□□□□ -0.74
CDK9-205ENST00000498339 OR52B6Q8NGF0 335 aa10.43□□□□□ -0.74
CDK9-205ENST00000498339 LILRB1Q8NHL6 650 aaPredicted RBP10.43□□□□□ -0.74
CDK9-205ENST00000498339 KAT2AQ92830 837 aa10.43□□□□□ -0.74
CDK9-205ENST00000498339 OSBPL9Q96SU4 736 aa10.43□□□□□ -0.74
CDK9-205ENST00000498339 FAIM2Q9BWQ8 316 aa10.43□□□□□ -0.74
CDK9-205ENST00000498339 OR10A4Q9H209 315 aa10.43□□□□□ -0.74
CDK9-205ENST00000498339 ZBTB26Q9HCK0 441 aa10.43□□□□□ -0.74
CDK9-205ENST00000498339 SDHAF3Q9NRP4 125 aa10.43□□□□□ -0.74
CDK9-205ENST00000498339 FAIMQ9NVQ4 179 aa10.43□□□□□ -0.74
CDK9-205ENST00000498339 XPR1Q9UBH6 696 aa10.43□□□□□ -0.74
CDK9-205ENST00000498339 AP4B1Q9Y6B7 739 aa10.43□□□□□ -0.74
CDK9-205ENST00000498339 SS18L1O75177 396 aaPredicted RBP10.42□□□□□ -0.74
CDK9-205ENST00000498339 CLDN9O95484 217 aa10.42□□□□□ -0.74
CDK9-205ENST00000498339 TUBBP07437 444 aa10.42□□□□□ -0.74
CDK9-205ENST00000498339 CT45A8P0DMV1 189 aa10.42□□□□□ -0.74
CDK9-205ENST00000498339 CT45A9P0DMV2 189 aa10.42□□□□□ -0.74
CDK9-205ENST00000498339 PSMB1P20618 241 aaKnown RBP10.42□□□□□ -0.74
CDK9-205ENST00000498339 IVDP26440 423 aa10.42□□□□□ -0.74
CDK9-205ENST00000498339 SSTR1P30872 391 aa10.42□□□□□ -0.74
CDK9-205ENST00000498339 SPRP35270 261 aaPredicted RBP10.42□□□□□ -0.74
CDK9-205ENST00000498339 RFX3P48380 749 aa10.42□□□□□ -0.74
CDK9-205ENST00000498339 CLK3P49761 638 aaKnown RBP10.42□□□□□ -0.74
CDK9-205ENST00000498339 CCNG1P51959 295 aa10.42□□□□□ -0.74
CDK9-205ENST00000498339 PSPHP78330 225 aa10.42□□□□□ -0.74
CDK9-205ENST00000498339 DR1Q01658 176 aa10.42□□□□□ -0.74
CDK9-205ENST00000498339 RUNX1T1Q06455 604 aa10.42□□□□□ -0.74
CDK9-205ENST00000498339 BSPH1Q075Z2 132 aa10.42□□□□□ -0.74
CDK9-205ENST00000498339 CT45A2Q5DJT8 189 aa10.42□□□□□ -0.74
CDK9-205ENST00000498339 NCMAPQ5T1S8 102 aa10.42□□□□□ -0.74
CDK9-205ENST00000498339 NPSR1Q6W5P4 371 aa10.42□□□□□ -0.74
CDK9-205ENST00000498339 DNM1P46Q6ZS02 220 aa10.42□□□□□ -0.74
CDK9-205ENST00000498339 IL17RELQ6ZVW7 336 aa10.42□□□□□ -0.74
CDK9-205ENST00000498339 OR9A2Q8NGT5 310 aa10.42□□□□□ -0.74
CDK9-205ENST00000498339 UHMK1Q8TAS1 419 aaKnown RBP10.42□□□□□ -0.74
CDK9-205ENST00000498339 PYROXD1Q8WU10 500 aa10.42□□□□□ -0.74
CDK9-205ENST00000498339 C1GALT1C1Q96EU7 318 aa10.42□□□□□ -0.74
CDK9-205ENST00000498339 CNRIP1Q96F85 164 aaPredicted RBP10.42□□□□□ -0.74
CDK9-205ENST00000498339 ADAD1Q96M93 576 aaKnown RBP10.42□□□□□ -0.74
CDK9-205ENST00000498339 TNFRSF13CQ96RJ3 184 aa10.42□□□□□ -0.74
CDK9-205ENST00000498339 NOL11Q9H8H0 719 aaKnown RBP10.42□□□□□ -0.74
CDK9-205ENST00000498339 CHODLQ9H9P2 273 aa10.42□□□□□ -0.74
CDK9-205ENST00000498339 CPSF2Q9P2I0 782 aaKnown RBP10.42□□□□□ -0.74
CDK9-205ENST00000498339 ADAM29Q9UKF5 820 aa10.42□□□□□ -0.74
CDK9-205ENST00000498339 UTS2RQ9UKP6 389 aa10.42□□□□□ -0.74
CDK9-205ENST00000498339 CES1P1Q9UKY3 287 aa10.42□□□□□ -0.74
CDK9-205ENST00000498339 SLC12A4Q9UP95 1085 aa10.42□□□□□ -0.74
CDK9-205ENST00000498339 VDAC3Q9Y277 283 aa10.42□□□□□ -0.74
CDK9-205ENST00000498339 NDUFB5O43674 189 aa10.41□□□□□ -0.74
CDK9-205ENST00000498339 SEC31AO94979 1220 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms