RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 PRSS53Q2L4Q9 553 aa14.02□□□□□ -0.17
NUP50-219ENST00000497960 TIGD3Q6B0B8 471 aa14.02□□□□□ -0.17
NUP50-219ENST00000497960 ANKRD26P1Q6NSI1 321 aa14.02□□□□□ -0.17
NUP50-219ENST00000497960 ANGPTL8Q6UXH0 198 aa14.02□□□□□ -0.17
NUP50-219ENST00000497960 B3GNT6Q6ZMB0 384 aa14.02□□□□□ -0.17
NUP50-219ENST00000497960 SLC44A2Q8IWA5 706 aaPredicted RBP14.02□□□□□ -0.17
NUP50-219ENST00000497960 OR1J4Q8NGS1 313 aa14.02□□□□□ -0.17
NUP50-219ENST00000497960 GNRHR2Q96P88 292 aa14.02□□□□□ -0.17
NUP50-219ENST00000497960 ZNF317Q96PQ6 595 aaPredicted RBP14.02□□□□□ -0.17
NUP50-219ENST00000497960 NODALQ96S42 347 aa14.02□□□□□ -0.17
NUP50-219ENST00000497960 OSBPL11Q9BXB4 747 aa14.02□□□□□ -0.17
NUP50-219ENST00000497960 TMEM120AQ9BXJ8 343 aa14.02□□□□□ -0.17
NUP50-219ENST00000497960 DPY30Q9C005 99 aa14.02□□□□□ -0.17
NUP50-219ENST00000497960 GLIPR2Q9H4G4 154 aa14.02□□□□□ -0.17
NUP50-219ENST00000497960 DDX18Q9NVP1 670 aaKnown RBP14.02□□□□□ -0.17
NUP50-219ENST00000497960 SH3BP4Q9P0V3 963 aa14.02□□□□□ -0.17
NUP50-219ENST00000497960 SPRR3Q9UBC9 169 aa14.02□□□□□ -0.17
NUP50-219ENST00000497960 MAPRE3Q9UPY8 281 aa14.02□□□□□ -0.17
NUP50-219ENST00000497960 EXO1Q9UQ84 846 aaKnown RBP14.02□□□□□ -0.17
NUP50-219ENST00000497960 C15orf41Q9Y2V0 281 aa14.02□□□□□ -0.17
NUP50-219ENST00000497960 OR10H1Q9Y4A9 318 aa14.02□□□□□ -0.17
NUP50-219ENST00000497960 FREM3P0C091 2139 aa14.02□□□□□ -0.17
NUP50-219ENST00000497960 C15orf38-AP3S2A0A0A6YYH1 394 aa14.01□□□□□ -0.17
NUP50-219ENST00000497960 PRAMEF25A6NGN4 478 aa14.01□□□□□ -0.17
NUP50-219ENST00000497960 PLOD2O00469 737 aa14.01□□□□□ -0.17
NUP50-219ENST00000497960 ICOSLGO75144 302 aa14.01□□□□□ -0.17
NUP50-219ENST00000497960 NME6O75414 186 aaPredicted RBP14.01□□□□□ -0.17
NUP50-219ENST00000497960 HPNP05981 417 aa14.01□□□□□ -0.17
NUP50-219ENST00000497960 CT45A8P0DMV1 189 aa14.01□□□□□ -0.17
NUP50-219ENST00000497960 CT45A9P0DMV2 189 aa14.01□□□□□ -0.17
NUP50-219ENST00000497960 PRPS1L1P21108 318 aa14.01□□□□□ -0.17
NUP50-219ENST00000497960 ENDOUP21128 410 aaKnown RBP14.01□□□□□ -0.17
NUP50-219ENST00000497960 IL12BP29460 328 aa14.01□□□□□ -0.17
NUP50-219ENST00000497960 MC3RP41968 323 aa14.01□□□□□ -0.17
NUP50-219ENST00000497960 NME5P56597 212 aa14.01□□□□□ -0.17
NUP50-219ENST00000497960 NUP107P57740 925 aa14.01□□□□□ -0.17
NUP50-219ENST00000497960 MRPS22P82650 360 aaKnown RBP14.01□□□□□ -0.17
NUP50-219ENST00000497960 EFR3AQ14156 821 aa14.01□□□□□ -0.17
NUP50-219ENST00000497960 GSTA3Q16772 222 aa14.01□□□□□ -0.17
NUP50-219ENST00000497960 ZNF385BQ569K4 471 aa14.01□□□□□ -0.17
NUP50-219ENST00000497960 CT45A2Q5DJT8 189 aa14.01□□□□□ -0.17
NUP50-219ENST00000497960 C1orf185Q5T7R7 199 aa14.01□□□□□ -0.17
NUP50-219ENST00000497960 FNDC7Q5VTL7 733 aa14.01□□□□□ -0.17
NUP50-219ENST00000497960 DESI1Q6ICB0 168 aa14.01□□□□□ -0.17
NUP50-219ENST00000497960 TMEM107Q6UX40 140 aa14.01□□□□□ -0.17
NUP50-219ENST00000497960 RPRMLQ8N4K4 120 aa14.01□□□□□ -0.17
NUP50-219ENST00000497960 KRTCAP2Q8N6L1 136 aa14.01□□□□□ -0.17
NUP50-219ENST00000497960 OR10Q1Q8NGQ4 319 aa14.01□□□□□ -0.17
NUP50-219ENST00000497960 STON2Q8WXE9 905 aa14.01□□□□□ -0.17
NUP50-219ENST00000497960 MTERF3Q96E29 417 aa14.01□□□□□ -0.17
NUP50-219ENST00000497960 SLC35A4Q96G79 324 aa14.01□□□□□ -0.17
NUP50-219ENST00000497960 ZNF764Q96H86 408 aaPredicted RBP14.01□□□□□ -0.17
NUP50-219ENST00000497960 AMDHD1Q96NU7 426 aa14.01□□□□□ -0.17
NUP50-219ENST00000497960 ADOQ96SZ5 270 aa14.01□□□□□ -0.17
NUP50-219ENST00000497960 UBQLN3Q9H347 655 aa14.01□□□□□ -0.17
NUP50-219ENST00000497960 C19orf53Q9UNZ5 99 aaPredicted RBP14.01□□□□□ -0.17
NUP50-219ENST00000497960 RNF6Q9Y252 685 aa14.01□□□□□ -0.17
NUP50-219ENST00000497960 PCDHGB3Q9Y5G1 929 aa14.01□□□□□ -0.17
NUP50-219ENST00000497960 FAM47E-STBD1D6RA91 191 aa14□□□□□ -0.17
NUP50-219ENST00000497960 SNPHO15079 494 aa14□□□□□ -0.17
NUP50-219ENST00000497960 SNRPB2P08579 225 aaKnown RBP14□□□□□ -0.17
NUP50-219ENST00000497960 PTGER4P35408 488 aa14□□□□□ -0.17
NUP50-219ENST00000497960 GCKP35557 465 aa14□□□□□ -0.17
NUP50-219ENST00000497960 ARFIP2P53365 341 aa14□□□□□ -0.17
NUP50-219ENST00000497960 SEC24CP53992 1094 aa14□□□□□ -0.17
NUP50-219ENST00000497960 CLNS1AP54105 237 aaKnown RBP14□□□□□ -0.17
NUP50-219ENST00000497960 CLDN8P56748 225 aa14□□□□□ -0.17
NUP50-219ENST00000497960 PDE7AQ13946 482 aa14□□□□□ -0.17
NUP50-219ENST00000497960 ZNHIT3Q15649 155 aaPredicted RBP14□□□□□ -0.17
NUP50-219ENST00000497960 NPSR1Q6W5P4 371 aa14□□□□□ -0.17
NUP50-219ENST00000497960 OR7A2PQ8NGA2 310 aa14□□□□□ -0.17
NUP50-219ENST00000497960 LILRB4Q8NHJ6 448 aa14□□□□□ -0.17
NUP50-219ENST00000497960 ZFP28Q8NHY6 868 aa14□□□□□ -0.17
NUP50-219ENST00000497960 ELP4Q96EB1 424 aa14□□□□□ -0.17
NUP50-219ENST00000497960 DTNBP1Q96EV8 351 aa14□□□□□ -0.17
NUP50-219ENST00000497960 ZBTB18Q99592 522 aa14□□□□□ -0.17
NUP50-219ENST00000497960 PRPF18Q99633 342 aaKnown RBP14□□□□□ -0.17
NUP50-219ENST00000497960 TTYH2Q9BSA4 534 aa14□□□□□ -0.17
NUP50-219ENST00000497960 GALNT9Q9HCQ5 603 aa14□□□□□ -0.17
NUP50-219ENST00000497960 ATAD3AQ9NVI7 634 aa14□□□□□ -0.17
NUP50-219ENST00000497960 KLHL14Q9P2G3 628 aa14□□□□□ -0.17
NUP50-219ENST00000497960 ATP6V1HQ9UI12 483 aa14□□□□□ -0.17
NUP50-219ENST00000497960 TRIM33Q9UPN9 1127 aa14□□□□□ -0.17
NUP50-219ENST00000497960 FAM215AQ9Y5M1 114 aa14□□□□□ -0.17
NUP50-219ENST00000497960 PHF3Q92576 2039 aaKnown RBP14□□□□□ -0.17
NUP50-219ENST00000497960 EXPH5Q8NEV8 1989 aa14□□□□□ -0.17
NUP50-219ENST00000497960 ITPR2Q14571 2701 aa13.99□□□□□ -0.17
NUP50-219ENST00000497960 C2orf72A6NCS6 295 aa13.99□□□□□ -0.17
NUP50-219ENST00000497960 UPK1AO00322 258 aa13.99□□□□□ -0.17
NUP50-219ENST00000497960 TSPAN2O60636 221 aa13.99□□□□□ -0.17
NUP50-219ENST00000497960 TBX19O60806 448 aa13.99□□□□□ -0.17
NUP50-219ENST00000497960 IFI6P09912 130 aa13.99□□□□□ -0.17
NUP50-219ENST00000497960 GLI4P10075 376 aa13.99□□□□□ -0.17
NUP50-219ENST00000497960 PTPN6P29350 595 aa13.99□□□□□ -0.17
NUP50-219ENST00000497960 GPC1P35052 558 aa13.99□□□□□ -0.17
NUP50-219ENST00000497960 PTGDSP41222 190 aa13.99□□□□□ -0.17
NUP50-219ENST00000497960 PNLIPRP2P54317 469 aa13.99□□□□□ -0.17
NUP50-219ENST00000497960 HSPB3Q12988 150 aa13.99□□□□□ -0.17
NUP50-219ENST00000497960 CYP27C1Q4G0S4 372 aa13.99□□□□□ -0.17
NUP50-219ENST00000497960 PDCD4Q53EL6 469 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms