RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 RHOJQ9H4E5 214 aa14.74□□□□□ -0.05
VIM-208ENST00000497849 A0A1W2PP18 115 aa14.73□□□□□ -0.05
VIM-208ENST00000497849 K7EPI3 171 aa14.73□□□□□ -0.05
VIM-208ENST00000497849 PHGDHO43175 533 aaKnown RBP14.73□□□□□ -0.05
VIM-208ENST00000497849 RIPK2O43353 540 aa14.73□□□□□ -0.05
VIM-208ENST00000497849 SSX4O60224 188 aa14.73□□□□□ -0.05
VIM-208ENST00000497849 TSPAN2O60636 221 aa14.73□□□□□ -0.05
VIM-208ENST00000497849 REM1O75628 298 aa14.73□□□□□ -0.05
VIM-208ENST00000497849 IL11P20809 199 aa14.73□□□□□ -0.05
VIM-208ENST00000497849 EMDP50402 254 aa14.73□□□□□ -0.05
VIM-208ENST00000497849 CASP9P55211 416 aa14.73□□□□□ -0.05
VIM-208ENST00000497849 ATP6V0D1P61421 351 aa14.73□□□□□ -0.05
VIM-208ENST00000497849 UAP1Q16222 522 aaPredicted RBP14.73□□□□□ -0.05
VIM-208ENST00000497849 RAET1LQ5VY80 246 aa14.73□□□□□ -0.05
VIM-208ENST00000497849 ALKBH2Q6NS38 261 aa14.73□□□□□ -0.05
VIM-208ENST00000497849 DNAJC14Q6Y2X3 702 aaPredicted RBP14.73□□□□□ -0.05
VIM-208ENST00000497849 CYS1Q717R9 158 aa14.73□□□□□ -0.05
VIM-208ENST00000497849 TRMT10CQ7L0Y3 403 aaKnown RBP14.73□□□□□ -0.05
VIM-208ENST00000497849 ATG4DQ86TL0 474 aaPredicted RBP14.73□□□□□ -0.05
VIM-208ENST00000497849 METTL25Q8N6Q8 603 aa14.73□□□□□ -0.05
VIM-208ENST00000497849 FADS6Q8N9I5 356 aa14.73□□□□□ -0.05
VIM-208ENST00000497849 OR10H5Q8NGA6 315 aa14.73□□□□□ -0.05
VIM-208ENST00000497849 OR52R1Q8NGF1 315 aa14.73□□□□□ -0.05
VIM-208ENST00000497849 OR5M1Q8NGP8 315 aa14.73□□□□□ -0.05
VIM-208ENST00000497849 UBLCP1Q8WVY7 318 aaPredicted RBP14.73□□□□□ -0.05
VIM-208ENST00000497849 ADOQ96SZ5 270 aa14.73□□□□□ -0.05
VIM-208ENST00000497849 TRAF4Q9BUZ4 470 aaPredicted RBP14.73□□□□□ -0.05
VIM-208ENST00000497849 SHARPINQ9H0F6 387 aa14.73□□□□□ -0.05
VIM-208ENST00000497849 OR10A4Q9H209 315 aa14.73□□□□□ -0.05
VIM-208ENST00000497849 BARX1Q9HBU1 254 aaPredicted RBP14.73□□□□□ -0.05
VIM-208ENST00000497849 CLEC4AQ9UMR7 237 aa14.73□□□□□ -0.05
VIM-208ENST00000497849 GPR52Q9Y2T5 361 aa14.73□□□□□ -0.05
VIM-208ENST00000497849 GPR55Q9Y2T6 319 aaPredicted RBP14.73□□□□□ -0.05
VIM-208ENST00000497849 MTO1Q9Y2Z2 717 aaKnown RBP14.73□□□□□ -0.05
VIM-208ENST00000497849 TENM1Q9UKZ4 2725 aa14.73□□□□□ -0.05
VIM-208ENST00000497849 FAM234BA2RU67 622 aa14.72□□□□□ -0.05
VIM-208ENST00000497849 OR2M5A3KFT3 312 aa14.72□□□□□ -0.05
VIM-208ENST00000497849 H3BML4 177 aa14.72□□□□□ -0.05
VIM-208ENST00000497849 S100BP04271 92 aaPredicted RBP14.72□□□□□ -0.05
VIM-208ENST00000497849 HK1P19367 917 aa14.72□□□□□ -0.05
VIM-208ENST00000497849 PSMB1P20618 241 aaKnown RBP14.72□□□□□ -0.05
VIM-208ENST00000497849 STX2P32856 288 aa14.72□□□□□ -0.05
VIM-208ENST00000497849 PHBP35232 272 aa14.72□□□□□ -0.05
VIM-208ENST00000497849 SLC6A8P48029 635 aa14.72□□□□□ -0.05
VIM-208ENST00000497849 POU4F1Q01851 419 aa14.72□□□□□ -0.05
VIM-208ENST00000497849 DUSP2Q05923 314 aa14.72□□□□□ -0.05
VIM-208ENST00000497849 LOXL1Q08397 574 aaPredicted RBP14.72□□□□□ -0.05
VIM-208ENST00000497849 SLC29A2Q14542 456 aa14.72□□□□□ -0.05
VIM-208ENST00000497849 ZNF672Q499Z4 452 aaPredicted RBP14.72□□□□□ -0.05
VIM-208ENST00000497849 TRMT12Q53H54 448 aaKnown RBP14.72□□□□□ -0.05
VIM-208ENST00000497849 MYLK4Q86YV6 388 aaPredicted RBP14.72□□□□□ -0.05
VIM-208ENST00000497849 KBTBD8Q8NFY9 601 aa14.72□□□□□ -0.05
VIM-208ENST00000497849 OR4K17Q8NGC6 315 aa14.72□□□□□ -0.05
VIM-208ENST00000497849 UBTD2Q8WUN7 234 aa14.72□□□□□ -0.05
VIM-208ENST00000497849 PLA2G12AQ9BZM1 189 aa14.72□□□□□ -0.05
VIM-208ENST00000497849 DSN1Q9H410 356 aa14.72□□□□□ -0.05
VIM-208ENST00000497849 OPTCQ9UBM4 332 aa14.72□□□□□ -0.05
VIM-208ENST00000497849 CES1P1Q9UKY3 287 aa14.72□□□□□ -0.05
VIM-208ENST00000497849 EMC9Q9Y3B6 208 aa14.72□□□□□ -0.05
VIM-208ENST00000497849 PCDHGA11Q9Y5H2 935 aa14.72□□□□□ -0.05
VIM-208ENST00000497849 POC1B-GALNT4F8VUJ3 575 aa14.71□□□□□ -0.05
VIM-208ENST00000497849 H0YIV9 168 aa14.71□□□□□ -0.05
VIM-208ENST00000497849 SS18L1O75177 396 aaPredicted RBP14.71□□□□□ -0.05
VIM-208ENST00000497849 ALDOAP04075 364 aaKnown RBP14.71□□□□□ -0.05
VIM-208ENST00000497849 ATP1B1P05026 303 aa14.71□□□□□ -0.05
VIM-208ENST00000497849 CD3EP07766 207 aa14.71□□□□□ -0.05
VIM-208ENST00000497849 FCGR2AP12318 317 aa14.71□□□□□ -0.05
VIM-208ENST00000497849 SLC12A2P55011 1212 aa14.71□□□□□ -0.05
VIM-208ENST00000497849 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.71□□□□□ -0.05
VIM-208ENST00000497849 BEND6Q5SZJ8 279 aaPredicted RBP14.71□□□□□ -0.05
VIM-208ENST00000497849 BEND4Q6ZU67 534 aa14.71□□□□□ -0.05
VIM-208ENST00000497849 OR2M3Q8NG83 312 aa14.71□□□□□ -0.05
VIM-208ENST00000497849 CDKL2Q92772 493 aa14.71□□□□□ -0.05
VIM-208ENST00000497849 S100PBPQ96BU1 408 aa14.71□□□□□ -0.05
VIM-208ENST00000497849 ZBTB9Q96C00 473 aa14.71□□□□□ -0.05
VIM-208ENST00000497849 UBXN10Q96LJ8 280 aa14.71□□□□□ -0.05
VIM-208ENST00000497849 TACO1Q9BSH4 297 aaKnown RBP14.71□□□□□ -0.05
VIM-208ENST00000497849 STMN4Q9H169 189 aaPredicted RBP14.71□□□□□ -0.05
VIM-208ENST00000497849 ACSS3Q9H6R3 686 aa14.71□□□□□ -0.05
VIM-208ENST00000497849 ESRP2Q9H6T0 727 aaKnown RBP14.71□□□□□ -0.05
VIM-208ENST00000497849 NUDT4Q9NZJ9 180 aa14.71□□□□□ -0.05
VIM-208ENST00000497849 A0A087WUV0 522 aaPredicted RBP14.7□□□□□ -0.06
VIM-208ENST00000497849 KCNAB3O43448 404 aa14.7□□□□□ -0.06
VIM-208ENST00000497849 NME6O75414 186 aaPredicted RBP14.7□□□□□ -0.06
VIM-208ENST00000497849 SHBGP04278 402 aa14.7□□□□□ -0.06
VIM-208ENST00000497849 CT45A8P0DMV1 189 aa14.7□□□□□ -0.06
VIM-208ENST00000497849 CT45A9P0DMV2 189 aa14.7□□□□□ -0.06
VIM-208ENST00000497849 ZNF16P17020 682 aaPredicted RBP14.7□□□□□ -0.06
VIM-208ENST00000497849 SRD5A1P18405 259 aa14.7□□□□□ -0.06
VIM-208ENST00000497849 HSD17B3P37058 310 aa14.7□□□□□ -0.06
VIM-208ENST00000497849 FEN1P39748 380 aaKnown RBP14.7□□□□□ -0.06
VIM-208ENST00000497849 CORO7P57737 925 aa14.7□□□□□ -0.06
VIM-208ENST00000497849 RPS3AP61247 264 aaKnown RBP14.7□□□□□ -0.06
VIM-208ENST00000497849 MRPS35P82673 323 aaKnown RBP14.7□□□□□ -0.06
VIM-208ENST00000497849 CT45A2Q5DJT8 189 aa14.7□□□□□ -0.06
VIM-208ENST00000497849 LIPJQ5W064 366 aa14.7□□□□□ -0.06
VIM-208ENST00000497849 GGNQ86UU5 652 aa14.7□□□□□ -0.06
VIM-208ENST00000497849 DTX2Q86UW9 622 aa14.7□□□□□ -0.06
VIM-208ENST00000497849 TEX9Q8N6V9 391 aa14.7□□□□□ -0.06
VIM-208ENST00000497849 WDR20Q8TBZ3 569 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms