RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 SEMG1P04279 462 aa10□□□□□ -0.81
TRAPPC12-223ENST00000497597 LIMS3P0CW19 117 aa10□□□□□ -0.81
TRAPPC12-223ENST00000497597 LIMS4P0CW20 117 aa10□□□□□ -0.81
TRAPPC12-223ENST00000497597 TFPIP10646 304 aa10□□□□□ -0.81
TRAPPC12-223ENST00000497597 CORO1AP31146 461 aaKnown RBP10□□□□□ -0.81
TRAPPC12-223ENST00000497597 PYCR1P32322 319 aa10□□□□□ -0.81
TRAPPC12-223ENST00000497597 SLC6A11P48066 632 aa10□□□□□ -0.81
TRAPPC12-223ENST00000497597 CRYBB1P53674 252 aaPredicted RBP10□□□□□ -0.81
TRAPPC12-223ENST00000497597 CDC42EP1Q00587 391 aa10□□□□□ -0.81
TRAPPC12-223ENST00000497597 SYPL1Q16563 259 aa10□□□□□ -0.81
TRAPPC12-223ENST00000497597 HES5Q5TA89 166 aa10□□□□□ -0.81
TRAPPC12-223ENST00000497597 TMEM107Q6UX40 140 aa10□□□□□ -0.81
TRAPPC12-223ENST00000497597 TPGS1Q6ZTW0 290 aa10□□□□□ -0.81
TRAPPC12-223ENST00000497597 LRRC70Q7Z2Q7 622 aa10□□□□□ -0.81
TRAPPC12-223ENST00000497597 ZER1Q7Z7L7 766 aa10□□□□□ -0.81
TRAPPC12-223ENST00000497597 CBLN2Q8IUK8 224 aa10□□□□□ -0.81
TRAPPC12-223ENST00000497597 CPOQ8IVL8 374 aa10□□□□□ -0.81
TRAPPC12-223ENST00000497597 NXPE1Q8N323 547 aa10□□□□□ -0.81
TRAPPC12-223ENST00000497597 LILRA3Q8N6C8 439 aaPredicted RBP10□□□□□ -0.81
TRAPPC12-223ENST00000497597 OR8J2Q8NGG1 315 aa10□□□□□ -0.81
TRAPPC12-223ENST00000497597 OR10K1Q8NGX5 313 aa10□□□□□ -0.81
TRAPPC12-223ENST00000497597 OR5J2Q8NH18 312 aa10□□□□□ -0.81
TRAPPC12-223ENST00000497597 CMSS1Q9BQ75 279 aaKnown RBP10□□□□□ -0.81
TRAPPC12-223ENST00000497597 DNAH14Q0VDD8 3507 aa10□□□□□ -0.81
TRAPPC12-223ENST00000497597 SBF1O95248 1867 aa10□□□□□ -0.81
TRAPPC12-223ENST00000497597 ABHD14A-ACY1A0A1B0GW23 586 aa10□□□□□ -0.81
TRAPPC12-223ENST00000497597 TRABD2BA6NFA1 517 aa10□□□□□ -0.81
TRAPPC12-223ENST00000497597 PRODHO43272 600 aa10□□□□□ -0.81
TRAPPC12-223ENST00000497597 SSX5O60225 188 aa10□□□□□ -0.81
TRAPPC12-223ENST00000497597 LDOC1O95751 146 aaPredicted RBP10□□□□□ -0.81
TRAPPC12-223ENST00000497597 LGI1O95970 557 aa10□□□□□ -0.81
TRAPPC12-223ENST00000497597 NMBP08949 121 aa10□□□□□ -0.81
TRAPPC12-223ENST00000497597 CXCL2P19875 107 aa10□□□□□ -0.81
TRAPPC12-223ENST00000497597 TIA1P31483 386 aaKnown RBP eCLIP10□□□□□ -0.81
TRAPPC12-223ENST00000497597 HNF1BP35680 557 aa10□□□□□ -0.81
TRAPPC12-223ENST00000497597 SPAM1P38567 509 aa10□□□□□ -0.81
TRAPPC12-223ENST00000497597 GDNFP39905 211 aa10□□□□□ -0.81
TRAPPC12-223ENST00000497597 PAN3Q58A45 887 aaKnown RBP10□□□□□ -0.81
TRAPPC12-223ENST00000497597 AGTRAPQ6RW13 159 aa10□□□□□ -0.81
TRAPPC12-223ENST00000497597 COMMD6Q7Z4G1 85 aa10□□□□□ -0.81
TRAPPC12-223ENST00000497597 LRRC28Q86X40 367 aaPredicted RBP10□□□□□ -0.81
TRAPPC12-223ENST00000497597 OR4D9Q8NGE8 314 aa10□□□□□ -0.81
TRAPPC12-223ENST00000497597 OR51L1Q8NGJ5 315 aa10□□□□□ -0.81
TRAPPC12-223ENST00000497597 C1orf216Q8TAB5 229 aa10□□□□□ -0.81
TRAPPC12-223ENST00000497597 ATOH1Q92858 354 aaPredicted RBP10□□□□□ -0.81
TRAPPC12-223ENST00000497597 TMEM159Q96B96 161 aa10□□□□□ -0.81
TRAPPC12-223ENST00000497597 SAMD11Q96NU1 681 aa10□□□□□ -0.81
TRAPPC12-223ENST00000497597 DPYSL5Q9BPU6 564 aa10□□□□□ -0.81
TRAPPC12-223ENST00000497597 TREX2Q9BQ50 279 aaPredicted RBP10□□□□□ -0.81
TRAPPC12-223ENST00000497597 DPH7Q9BTV6 452 aa10□□□□□ -0.81
TRAPPC12-223ENST00000497597 TINAGL1Q9GZM7 467 aaPredicted RBP10□□□□□ -0.81
TRAPPC12-223ENST00000497597 C20orf85Q9H1P6 137 aa10□□□□□ -0.81
TRAPPC12-223ENST00000497597 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 SGK494L7N484 410 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 FAAHO00519 579 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 CHST10O43529 356 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 IGF2P01344 180 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 RLN2P04090 185 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 PIPP12273 146 aaPredicted RBP9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 CD22P20273 847 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 ACRV1P26436 265 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 NSG1P42857 185 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 KCNJ3P48549 501 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 SNRPGP62308 76 aaKnown RBP9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 PDSS1Q5T2R2 415 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 GPRC6AQ5T6X5 926 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 PYHIN1Q6K0P9 492 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 APOOLQ6UXV4 268 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 GPRC5AQ8NFJ5 357 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 OR5M3Q8NGP4 307 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 SLC38A5Q8WUX1 472 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 ADAMTS14Q8WXS8 1223 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 C3orf49Q96BT1 292 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 GIMAP5Q96F15 307 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 SCMH1Q96GD3 660 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 ZBED3Q96IU2 234 aaPredicted RBP9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 ZNF471Q9BX82 626 aaPredicted RBP9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 FBXL3Q9UKT7 428 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 EXOSC1Q9Y3B2 195 aaKnown RBP9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 ANKRD31Q8N7Z5 1873 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 A0A1B0GW55 424 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 TRDV1A0A1B0GX56 115 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 F8W036 122 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 GPR31O00270 319 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 SMAD6O43541 496 aaKnown RBP9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 PEX14O75381 377 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 CNMDO75829 334 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 F12P00748 615 aaPredicted RBP9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 GYPBP06028 91 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 DUX4L2P0CJ85 424 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 DUX4L3P0CJ86 424 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 DUX4L4P0CJ87 422 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 DUX4L5P0CJ88 424 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 DUX4L6P0CJ89 424 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 DUX4L7P0CJ90 424 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 ACP2P11117 423 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 LIPCP11150 499 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 MAOBP27338 520 aa9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 SIM1P81133 766 aaPredicted RBP9.99□□□□□ -0.81
TRAPPC12-223ENST00000497597 FLI1Q01543 452 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms