RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 HORMAD2Q8N7B1 307 aa18.46■□□□□ 0.55
CTSD-206ENST00000497544 OR4N2Q8NGD1 307 aa18.46■□□□□ 0.55
CTSD-206ENST00000497544 OR52N2Q8NGI0 321 aa18.46■□□□□ 0.55
CTSD-206ENST00000497544 OR5D16Q8NGK9 328 aa18.46■□□□□ 0.55
CTSD-206ENST00000497544 PIK3R3Q92569 461 aa18.46■□□□□ 0.55
CTSD-206ENST00000497544 CDS1Q92903 461 aa18.46■□□□□ 0.55
CTSD-206ENST00000497544 TMBIM1Q969X1 311 aa18.46■□□□□ 0.55
CTSD-206ENST00000497544 OMA1Q96E52 524 aa18.46■□□□□ 0.55
CTSD-206ENST00000497544 THUMPD3Q9BV44 507 aaKnown RBP18.46■□□□□ 0.55
CTSD-206ENST00000497544 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.46■□□□□ 0.552e-6■■■■■ 27.7
CTSD-206ENST00000497544 EXD2Q9NVH0 621 aa18.46■□□□□ 0.55
CTSD-206ENST00000497544 LRFN1Q9P244 771 aa18.46■□□□□ 0.55
CTSD-206ENST00000497544 CORO2BQ9UQ03 480 aa18.46■□□□□ 0.55
CTSD-206ENST00000497544 TP53TG5Q9Y2B4 290 aa18.46■□□□□ 0.55
CTSD-206ENST00000497544 CELSR2Q9HCU4 2923 aa18.45■□□□□ 0.54
CTSD-206ENST00000497544 TRBV5-3A0A0A0MS03 114 aa18.45■□□□□ 0.54
CTSD-206ENST00000497544 GXYLT2A0PJZ3 443 aa18.45■□□□□ 0.54
CTSD-206ENST00000497544 DPM1O60762 260 aa18.45■□□□□ 0.54
CTSD-206ENST00000497544 ESRRAP11474 423 aaPredicted RBP18.45■□□□□ 0.54
CTSD-206ENST00000497544 PIGAP37287 484 aa18.45■□□□□ 0.54
CTSD-206ENST00000497544 MAGEA8P43361 318 aa18.45■□□□□ 0.54
CTSD-206ENST00000497544 RFX3P48380 749 aa18.45■□□□□ 0.54
CTSD-206ENST00000497544 MAN2A2P49641 1150 aa18.45■□□□□ 0.54
CTSD-206ENST00000497544 PSMD4P55036 377 aaKnown RBP18.45■□□□□ 0.54
CTSD-206ENST00000497544 TUBA3CQ13748 450 aa18.45■□□□□ 0.54
CTSD-206ENST00000497544 CAPRIN1Q14444 709 aaKnown RBP18.45■□□□□ 0.54
CTSD-206ENST00000497544 RGNQ15493 299 aa18.45■□□□□ 0.54
CTSD-206ENST00000497544 LACTB2Q53H82 288 aaPredicted RBP18.45■□□□□ 0.54
CTSD-206ENST00000497544 EXOSC6Q5RKV6 272 aaKnown RBP18.45■□□□□ 0.54
CTSD-206ENST00000497544 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.45■□□□□ 0.544e-12■■■■■ 63.9
CTSD-206ENST00000497544 ATAD3BQ5T9A4 648 aa18.45■□□□□ 0.54
CTSD-206ENST00000497544 ZNF468Q5VIY5 522 aaPredicted RBP18.45■□□□□ 0.54
CTSD-206ENST00000497544 TUBA3EQ6PEY2 450 aa18.45■□□□□ 0.54
CTSD-206ENST00000497544 IGFL3Q6UXB1 125 aa18.45■□□□□ 0.54
CTSD-206ENST00000497544 RAB8BQ92930 207 aa18.45■□□□□ 0.54
CTSD-206ENST00000497544 ROPN1LQ96C74 230 aa18.45■□□□□ 0.54
CTSD-206ENST00000497544 RMND5BQ96G75 393 aaPredicted RBP18.45■□□□□ 0.54
CTSD-206ENST00000497544 NSL1Q96IY1 281 aa18.45■□□□□ 0.54
CTSD-206ENST00000497544 ANKRD27Q96NW4 1050 aa18.45■□□□□ 0.54
CTSD-206ENST00000497544 SH3GL1Q99961 368 aa18.45■□□□□ 0.54
CTSD-206ENST00000497544 BTBD2Q9BX70 525 aa18.45■□□□□ 0.54
CTSD-206ENST00000497544 SERHL2Q9H4I8 314 aa18.45■□□□□ 0.54
CTSD-206ENST00000497544 ZNF71Q9NQZ8 489 aaPredicted RBP18.45■□□□□ 0.54
CTSD-206ENST00000497544 CRYBG3Q68DQ2 2970 aa18.45■□□□□ 0.54
CTSD-206ENST00000497544 K7EM74 188 aa18.44■□□□□ 0.54
CTSD-206ENST00000497544 PDGFAP04085 211 aa18.44■□□□□ 0.54
CTSD-206ENST00000497544 FBXO45P0C2W1 286 aa18.44■□□□□ 0.54
CTSD-206ENST00000497544 IL12BP29460 328 aa18.44■□□□□ 0.54
CTSD-206ENST00000497544 CPA2P48052 419 aa18.44■□□□□ 0.54
CTSD-206ENST00000497544 MNAT1P51948 309 aa18.44■□□□□ 0.54
CTSD-206ENST00000497544 MRPS22P82650 360 aaKnown RBP18.44■□□□□ 0.54
CTSD-206ENST00000497544 ZNF791Q3KP31 576 aaPredicted RBP18.44■□□□□ 0.54
CTSD-206ENST00000497544 COX20Q5RI15 118 aa18.44■□□□□ 0.54
CTSD-206ENST00000497544 LYPD8Q6UX82 237 aa18.44■□□□□ 0.54
CTSD-206ENST00000497544 CYP4Z2PQ8N1L4 340 aa18.44■□□□□ 0.54
CTSD-206ENST00000497544 BCORP1Q8N888 145 aa18.44■□□□□ 0.54
CTSD-206ENST00000497544 FAM13CQ8NE31 585 aa18.44■□□□□ 0.54
CTSD-206ENST00000497544 TMEM125Q96AQ2 219 aa18.44■□□□□ 0.54
CTSD-206ENST00000497544 SPACA9Q96E40 222 aaPredicted RBP18.44■□□□□ 0.54
CTSD-206ENST00000497544 TRIM45Q9H8W5 580 aaPredicted RBP18.44■□□□□ 0.54
CTSD-206ENST00000497544 KCNE3Q9Y6H6 103 aa18.44■□□□□ 0.54
CTSD-206ENST00000497544 POLQO75417 2590 aa18.43■□□□□ 0.54
CTSD-206ENST00000497544 EML6Q6ZMW3 1958 aa18.43■□□□□ 0.54
CTSD-206ENST00000497544 TP53I11O14683 189 aa18.43■□□□□ 0.54
CTSD-206ENST00000497544 ASNA1O43681 348 aa18.43■□□□□ 0.54
CTSD-206ENST00000497544 PPM1BO75688 479 aa18.43■□□□□ 0.54
CTSD-206ENST00000497544 KCNK2O95069 426 aa18.43■□□□□ 0.54
CTSD-206ENST00000497544 NUDT2P50583 147 aa18.43■□□□□ 0.54
CTSD-206ENST00000497544 PNLIPRP2P54317 469 aa18.43■□□□□ 0.54
CTSD-206ENST00000497544 FADDQ13158 208 aa18.43■□□□□ 0.54
CTSD-206ENST00000497544 OR1C1Q15619 314 aa18.43■□□□□ 0.54
CTSD-206ENST00000497544 SPINK14Q6IE38 97 aa18.43■□□□□ 0.54
CTSD-206ENST00000497544 NANOGP8Q6NSW7 305 aa18.43■□□□□ 0.54
CTSD-206ENST00000497544 FIGNL1Q6PIW4 674 aa18.43■□□□□ 0.54
CTSD-206ENST00000497544 RTL4Q6ZR62 310 aa18.43■□□□□ 0.54
CTSD-206ENST00000497544 NUP54Q7Z3B4 507 aa18.43■□□□□ 0.54
CTSD-206ENST00000497544 C16orf62Q7Z3J2 963 aa18.43■□□□□ 0.54
CTSD-206ENST00000497544 CATSPER1Q8NEC5 780 aa18.43■□□□□ 0.54
CTSD-206ENST00000497544 OR5M3Q8NGP4 307 aa18.43■□□□□ 0.54
CTSD-206ENST00000497544 EFHD2Q96C19 240 aaPredicted RBP18.43■□□□□ 0.54
CTSD-206ENST00000497544 SGCZQ96LD1 299 aa18.43■□□□□ 0.54
CTSD-206ENST00000497544 COL21A1Q96P44 957 aa18.43■□□□□ 0.54
CTSD-206ENST00000497544 ADOQ96SZ5 270 aa18.43■□□□□ 0.54
CTSD-206ENST00000497544 CPPED1Q9BRF8 314 aaPredicted RBP18.43■□□□□ 0.54
CTSD-206ENST00000497544 G6PC3Q9BUM1 346 aa18.43■□□□□ 0.54
CTSD-206ENST00000497544 NANOGQ9H9S0 305 aa18.43■□□□□ 0.54
CTSD-206ENST00000497544 THUMPD1Q9NXG2 353 aaKnown RBP18.43■□□□□ 0.54
CTSD-206ENST00000497544 GMEB1Q9Y692 573 aa18.43■□□□□ 0.54
CTSD-206ENST00000497544 NINQ8N4C6 2090 aa18.42■□□□□ 0.54
CTSD-206ENST00000497544 TMEM247A6NEH6 219 aa18.42■□□□□ 0.54
CTSD-206ENST00000497544 CCT8L1PA6NM43 557 aa18.42■□□□□ 0.54
CTSD-206ENST00000497544 HMGN4O00479 90 aa18.42■□□□□ 0.54
CTSD-206ENST00000497544 HS6ST1O60243 411 aa18.42■□□□□ 0.54
CTSD-206ENST00000497544 TSPAN2O60636 221 aa18.42■□□□□ 0.54
CTSD-206ENST00000497544 ABCB7O75027 752 aa18.42■□□□□ 0.54
CTSD-206ENST00000497544 CBX6O95503 412 aa18.42■□□□□ 0.54
CTSD-206ENST00000497544 IL33O95760 270 aa18.42■□□□□ 0.54
CTSD-206ENST00000497544 AK1P00568 194 aa18.42■□□□□ 0.54
CTSD-206ENST00000497544 ETFAP13804 333 aa18.42■□□□□ 0.54
CTSD-206ENST00000497544 GPX2P18283 190 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms