RNA–Protein interactions for RNA: ENST00000497527.1

HPS1-213, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-213ENST00000497527 AGAP5A6NIR3 686 aa11.3□□□□□ -0.6
HPS1-213ENST00000497527 SAGE2PA6NJ88 616 aa11.3□□□□□ -0.6
HPS1-213ENST00000497527 A8MUA0 341 aa11.3□□□□□ -0.6
HPS1-213ENST00000497527 EI24O14681 340 aa11.3□□□□□ -0.6
HPS1-213ENST00000497527 ACOX3O15254 700 aa11.3□□□□□ -0.6
HPS1-213ENST00000497527 KCNK2O95069 426 aa11.3□□□□□ -0.6
HPS1-213ENST00000497527 DDAH2O95865 285 aa11.3□□□□□ -0.6
HPS1-213ENST00000497527 ZNF28P17035 718 aa11.3□□□□□ -0.6
HPS1-213ENST00000497527 CSRP1P21291 193 aaKnown RBP11.3□□□□□ -0.6
HPS1-213ENST00000497527 DRD5P21918 477 aa11.3□□□□□ -0.6
HPS1-213ENST00000497527 RPS4Y1P22090 263 aaKnown RBP11.3□□□□□ -0.6
HPS1-213ENST00000497527 PIGAP37287 484 aa11.3□□□□□ -0.6
HPS1-213ENST00000497527 DCTP40126 519 aa11.3□□□□□ -0.6
HPS1-213ENST00000497527 NCF4Q15080 339 aa11.3□□□□□ -0.6
HPS1-213ENST00000497527 GPR68Q15743 365 aa11.3□□□□□ -0.6
HPS1-213ENST00000497527 DECR1Q16698 335 aa11.3□□□□□ -0.6
HPS1-213ENST00000497527 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.3□□□□□ -0.6
HPS1-213ENST00000497527 HES3Q5TGS1 186 aa11.3□□□□□ -0.6
HPS1-213ENST00000497527 ZNF517Q6ZMY9 492 aaPredicted RBP11.3□□□□□ -0.6
HPS1-213ENST00000497527 ANKRD37Q7Z713 158 aa11.3□□□□□ -0.6
HPS1-213ENST00000497527 LAPTM4BQ86VI4 370 aa11.3□□□□□ -0.6
HPS1-213ENST00000497527 EPHX4Q8IUS5 362 aa11.3□□□□□ -0.6
HPS1-213ENST00000497527 KBTBD2Q8IY47 623 aa11.3□□□□□ -0.6
HPS1-213ENST00000497527 C17orf47Q8NEP4 570 aa11.3□□□□□ -0.6
HPS1-213ENST00000497527 B3GNT7Q8NFL0 401 aa11.3□□□□□ -0.6
HPS1-213ENST00000497527 GPR32P1Q8NGA4 272 aa11.3□□□□□ -0.6
HPS1-213ENST00000497527 ZNF721Q8TF20 911 aa11.3□□□□□ -0.6
HPS1-213ENST00000497527 APOBEC4Q8WW27 367 aaKnown RBP11.3□□□□□ -0.6
HPS1-213ENST00000497527 RMND5BQ96G75 393 aaPredicted RBP11.3□□□□□ -0.6
HPS1-213ENST00000497527 VMP1Q96GC9 406 aa11.3□□□□□ -0.6
HPS1-213ENST00000497527 NAF1Q96HR8 494 aaKnown RBP11.3□□□□□ -0.6
HPS1-213ENST00000497527 LCORQ96JN0 433 aaPredicted RBP11.3□□□□□ -0.6
HPS1-213ENST00000497527 PIP5K1AQ99755 562 aa11.3□□□□□ -0.6
HPS1-213ENST00000497527 ARHGDIGQ99819 225 aa11.3□□□□□ -0.6
HPS1-213ENST00000497527 ITPAQ9BY32 194 aa11.3□□□□□ -0.6
HPS1-213ENST00000497527 POLR2J2Q9GZM3 115 aaKnown RBP11.3□□□□□ -0.6
HPS1-213ENST00000497527 HOXD1Q9GZZ0 328 aa11.3□□□□□ -0.6
HPS1-213ENST00000497527 POLR2J3Q9H1A7 115 aaKnown RBP11.3□□□□□ -0.6
HPS1-213ENST00000497527 SOX17Q9H6I2 414 aaPredicted RBP11.3□□□□□ -0.6
HPS1-213ENST00000497527 RYDENQ9NUL5 291 aaKnown RBP11.3□□□□□ -0.6
HPS1-213ENST00000497527 FAM86C1Q9NVL1 165 aa11.3□□□□□ -0.6
HPS1-213ENST00000497527 SMPD3Q9NY59 655 aaPredicted RBP11.3□□□□□ -0.6
HPS1-213ENST00000497527 NDUFAF4Q9P032 175 aa11.3□□□□□ -0.6
HPS1-213ENST00000497527 PISDQ9UG56 409 aa11.3□□□□□ -0.6
HPS1-213ENST00000497527 MKLN1Q9UL63 735 aa11.3□□□□□ -0.6
HPS1-213ENST00000497527 CBLCQ9ULV8 474 aa11.3□□□□□ -0.6
HPS1-213ENST00000497527 PPIEQ9UNP9 301 aaKnown RBP11.3□□□□□ -0.6
HPS1-213ENST00000497527 ZNF443Q9Y2A4 671 aaPredicted RBP11.3□□□□□ -0.6
HPS1-213ENST00000497527 C2orf92A0A1B0GVN3 265 aa11.29□□□□□ -0.6
HPS1-213ENST00000497527 PROB1E7EW31 1015 aa11.29□□□□□ -0.6
HPS1-213ENST00000497527 HRKO00198 91 aa11.29□□□□□ -0.6
HPS1-213ENST00000497527 TNFRSF11BO00300 401 aa11.29□□□□□ -0.6
HPS1-213ENST00000497527 SOCS2O14508 198 aa11.29□□□□□ -0.6
HPS1-213ENST00000497527 AP3D1O14617 1153 aa11.29□□□□□ -0.6
HPS1-213ENST00000497527 FCMRO60667 390 aa11.29□□□□□ -0.6
HPS1-213ENST00000497527 STK17BO94768 372 aa11.29□□□□□ -0.6
HPS1-213ENST00000497527 CLPSP04118 112 aa11.29□□□□□ -0.6
HPS1-213ENST00000497527 CT45A8P0DMV1 189 aa11.29□□□□□ -0.6
HPS1-213ENST00000497527 CT45A9P0DMV2 189 aa11.29□□□□□ -0.6
HPS1-213ENST00000497527 CDH2P19022 906 aaPredicted RBP11.29□□□□□ -0.6
HPS1-213ENST00000497527 ITIH1P19827 911 aa11.29□□□□□ -0.6
HPS1-213ENST00000497527 RRM2P31350 389 aa11.29□□□□□ -0.6
HPS1-213ENST00000497527 KRT20P35900 424 aa11.29□□□□□ -0.6
HPS1-213ENST00000497527 OR1E2P47887 323 aa11.29□□□□□ -0.6
HPS1-213ENST00000497527 RAD23AP54725 363 aa11.29□□□□□ -0.6
HPS1-213ENST00000497527 SPIBQ01892 262 aa11.29□□□□□ -0.6
HPS1-213ENST00000497527 MED21Q13503 144 aa11.29□□□□□ -0.6
HPS1-213ENST00000497527 NRF1Q16656 503 aa11.29□□□□□ -0.6
HPS1-213ENST00000497527 IQCCQ4KMZ1 466 aa11.29□□□□□ -0.6
HPS1-213ENST00000497527 FLYWCH1Q4VC44 716 aa11.29□□□□□ -0.6
HPS1-213ENST00000497527 CT45A2Q5DJT8 189 aa11.29□□□□□ -0.6
HPS1-213ENST00000497527 RNF220Q5VTB9 566 aa11.29□□□□□ -0.6
HPS1-213ENST00000497527 TMEM205Q6UW68 189 aa11.29□□□□□ -0.6
HPS1-213ENST00000497527 FAM198BQ6UWH4 519 aa11.29□□□□□ -0.6
HPS1-213ENST00000497527 DHRS13Q6UX07 377 aa11.29□□□□□ -0.6
HPS1-213ENST00000497527 C6orf15Q6UXA7 325 aaPredicted RBP11.29□□□□□ -0.6
HPS1-213ENST00000497527 CPEB2Q7Z5Q1 589 aaKnown RBP11.29□□□□□ -0.6
HPS1-213ENST00000497527 CMIPQ8IY22 773 aa11.29□□□□□ -0.6
HPS1-213ENST00000497527 TAGAPQ8N103 731 aa11.29□□□□□ -0.6
HPS1-213ENST00000497527 LINC00471Q8N535 108 aa11.29□□□□□ -0.6
HPS1-213ENST00000497527 PIK3C3Q8NEB9 887 aa11.29□□□□□ -0.6
HPS1-213ENST00000497527 SLC35B4Q969S0 331 aa11.29□□□□□ -0.6
HPS1-213ENST00000497527 HSPBAP1Q96EW2 488 aa11.29□□□□□ -0.6
HPS1-213ENST00000497527 AMBRA1Q9C0C7 1298 aa11.29□□□□□ -0.6
HPS1-213ENST00000497527 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.29□□□□□ -0.6
HPS1-213ENST00000497527 TOR4AQ9NXH8 423 aa11.29□□□□□ -0.6
HPS1-213ENST00000497527 ENOPH1Q9UHY7 261 aa11.29□□□□□ -0.6
HPS1-213ENST00000497527 PADI1Q9ULC6 663 aa11.29□□□□□ -0.6
HPS1-213ENST00000497527 TMCC3Q9ULS5 477 aa11.29□□□□□ -0.6
HPS1-213ENST00000497527 B3GALT1Q9Y5Z6 326 aa11.29□□□□□ -0.6
HPS1-213ENST00000497527 GXYLT2A0PJZ3 443 aa11.28□□□□□ -0.6
HPS1-213ENST00000497527 PDLIM1O00151 329 aa11.28□□□□□ -0.6
HPS1-213ENST00000497527 DENRO43583 198 aaKnown RBP11.28□□□□□ -0.6
HPS1-213ENST00000497527 NME6O75414 186 aaPredicted RBP11.28□□□□□ -0.6
HPS1-213ENST00000497527 DKK1O94907 266 aa11.28□□□□□ -0.6
HPS1-213ENST00000497527 GADD45GO95257 159 aa11.28□□□□□ -0.6
HPS1-213ENST00000497527 IL33O95760 270 aa11.28□□□□□ -0.6
HPS1-213ENST00000497527 DLGAP3O95886 979 aa11.28□□□□□ -0.6
HPS1-213ENST00000497527 RAB40ALP0C0E4 278 aa11.28□□□□□ -0.6
HPS1-213ENST00000497527 NID1P14543 1247 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms