RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 OR5F1O95221 314 aa12.18□□□□□ -0.46
GARNL3-220ENST00000496711 SCG5P05408 212 aa12.18□□□□□ -0.46
GARNL3-220ENST00000496711 THBS1P07996 1170 aa12.18□□□□□ -0.46
GARNL3-220ENST00000496711 ALOX5P09917 674 aa12.18□□□□□ -0.46
GARNL3-220ENST00000496711 CTSEP14091 401 aa12.18□□□□□ -0.46
GARNL3-220ENST00000496711 OMPP47874 163 aa12.18□□□□□ -0.46
GARNL3-220ENST00000496711 PPP1CAP62136 330 aa12.18□□□□□ -0.46
GARNL3-220ENST00000496711 DOC2BQ14184 412 aa12.18□□□□□ -0.46
GARNL3-220ENST00000496711 SSX1Q16384 188 aa12.18□□□□□ -0.46
GARNL3-220ENST00000496711 DECR1Q16698 335 aa12.18□□□□□ -0.46
GARNL3-220ENST00000496711 TRMT12Q53H54 448 aaKnown RBP12.18□□□□□ -0.46
GARNL3-220ENST00000496711 EXOSC6Q5RKV6 272 aaKnown RBP12.18□□□□□ -0.46
GARNL3-220ENST00000496711 RASSF6Q6ZTQ3 369 aa12.18□□□□□ -0.46
GARNL3-220ENST00000496711 PRICKLE2Q7Z3G6 844 aa12.18□□□□□ -0.46
GARNL3-220ENST00000496711 MEX3DQ86XN8 651 aaKnown RBP12.18□□□□□ -0.46
GARNL3-220ENST00000496711 CA13Q8N1Q1 262 aa12.18□□□□□ -0.46
GARNL3-220ENST00000496711 TMEM52Q8NDY8 209 aa12.18□□□□□ -0.46
GARNL3-220ENST00000496711 OR5T3Q8NGG3 340 aa12.18□□□□□ -0.46
GARNL3-220ENST00000496711 FGF11Q92914 225 aa12.18□□□□□ -0.46
GARNL3-220ENST00000496711 FAM46AQ96IP4 442 aaKnown RBP12.18□□□□□ -0.46
GARNL3-220ENST00000496711 LRR1Q96L50 414 aa12.18□□□□□ -0.46
GARNL3-220ENST00000496711 ZNF582Q96NG8 517 aaPredicted RBP12.18□□□□□ -0.46
GARNL3-220ENST00000496711 CCDC3Q9BQI4 270 aa12.18□□□□□ -0.46
GARNL3-220ENST00000496711 PRRG3Q9BZD7 231 aa12.18□□□□□ -0.46
GARNL3-220ENST00000496711 ZNF350Q9GZX5 532 aa12.18□□□□□ -0.46
GARNL3-220ENST00000496711 ADAP2Q9NPF8 381 aa12.18□□□□□ -0.46
GARNL3-220ENST00000496711 CNIH4Q9P003 139 aa12.18□□□□□ -0.46
GARNL3-220ENST00000496711 MTCH2Q9Y6C9 303 aa12.18□□□□□ -0.46
GARNL3-220ENST00000496711 CYR61O00622 381 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 MYL12BO14950 172 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 DSCR3O14972 297 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 RAB36O95755 333 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 GPR75O95800 540 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 IFI6P09912 130 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 NT5EP21589 574 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 FPR3P25089 353 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 NUDT1P36639 197 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 VSX2P58304 361 aaPredicted RBP12.17□□□□□ -0.46
GARNL3-220ENST00000496711 EFNB1P98172 346 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 HOXC5Q00444 222 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 HHEXQ03014 270 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 DUSP8Q13202 625 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 COL9A2Q14055 689 aaPredicted RBP12.17□□□□□ -0.46
GARNL3-220ENST00000496711 SPHARQ15513 63 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 SNAPC1Q16533 368 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 SOWAHCQ53LP3 525 aaPredicted RBP12.17□□□□□ -0.46
GARNL3-220ENST00000496711 DCST2Q5T1A1 773 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 ARMC6Q6NXE6 501 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 SLC36A4Q6YBV0 504 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 GDF7Q7Z4P5 450 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 MRGPREQ86SM8 312 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 ZNF761Q86XN6 746 aaPredicted RBP12.17□□□□□ -0.46
GARNL3-220ENST00000496711 RBM12BQ8IXT5 1001 aaKnown RBP12.17□□□□□ -0.46
GARNL3-220ENST00000496711 CACTIN-AS1Q8N1I8 211 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 ZNF619Q8N2I2 560 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 FRMD1Q8N878 549 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 CDRT4Q8N9R6 151 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 TOR1AIP2Q8NFQ8 470 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 OR8D4Q8NGM9 314 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 TMEM163Q8TC26 289 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 SLC41A3Q96GZ6 507 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 SDF2Q99470 211 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 GPR174Q9BXC1 333 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 NXF2Q9GZY0 626 aaKnown RBP12.17□□□□□ -0.46
GARNL3-220ENST00000496711 RNF167Q9H6Y7 350 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 DAPK2Q9UIK4 370 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 POMT2Q9UKY4 750 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 DIMT1Q9UNQ2 313 aaKnown RBP12.17□□□□□ -0.46
GARNL3-220ENST00000496711 SATB2Q9UPW6 733 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 AGAP5A6NIR3 686 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 KPNA4O00629 521 aaPredicted RBP12.17□□□□□ -0.46
GARNL3-220ENST00000496711 PLOD3O60568 738 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 CKMT1AP12532 417 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 ENDOUP21128 410 aaKnown RBP12.17□□□□□ -0.46
GARNL3-220ENST00000496711 RPS4Y1P22090 263 aaKnown RBP12.17□□□□□ -0.46
GARNL3-220ENST00000496711 RANBP1P43487 201 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 BLKP51451 505 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 RAB38P57729 211 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 EEF1A1P68104 462 aaKnown RBP12.17□□□□□ -0.46
GARNL3-220ENST00000496711 C1DQ13901 141 aaKnown RBP12.17□□□□□ -0.46
GARNL3-220ENST00000496711 CCNJQ5T5M9 372 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 RANBP3LQ86VV4 465 aaPredicted RBP12.17□□□□□ -0.46
GARNL3-220ENST00000496711 PARGQ86W56 976 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 NKAIN4Q8IVV8 208 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 TDHQ8IZJ6 230 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 NANOGP1Q8N7R0 232 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 COX18Q8N8Q8 333 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 PROKR2Q8NFJ6 384 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 ZDHHC1Q8WTX9 485 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 SLC38A2Q96QD8 506 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 STACQ99469 402 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 C6orf62Q9GZU0 229 aaPredicted RBP12.17□□□□□ -0.46
GARNL3-220ENST00000496711 SAP130Q9H0E3 1048 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 HHATLQ9HCP6 504 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 DUSP22Q9NRW4 184 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 WSB2Q9NYS7 404 aaPredicted RBP12.17□□□□□ -0.46
GARNL3-220ENST00000496711 MAT2BQ9NZL9 334 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 CLEC2DQ9UHP7 191 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 NTNG1Q9Y2I2 539 aa12.17□□□□□ -0.46
GARNL3-220ENST00000496711 CENPVL1A0A0U1RR11 272 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms